RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 K7N7A8 449 aa10.6□□□□□ -0.71
NELFE-209ENST00000488426 ZNF205O95201 554 aa10.6□□□□□ -0.71
NELFE-209ENST00000488426 TFF1P04155 84 aa10.6□□□□□ -0.71
NELFE-209ENST00000488426 ABCA11PQ4W5N1 156 aa10.6□□□□□ -0.71
NELFE-209ENST00000488426 LIN54Q6MZP7 749 aa10.6□□□□□ -0.71
NELFE-209ENST00000488426 KRTAP1-3Q8IUG1 177 aa10.6□□□□□ -0.71
NELFE-209ENST00000488426 H1FOOQ8IZA3 346 aaPredicted RBP10.6□□□□□ -0.71
NELFE-209ENST00000488426 FAM185AQ8N0U4 392 aa10.6□□□□□ -0.71
NELFE-209ENST00000488426 CCDC71LQ8N9Z2 235 aa10.6□□□□□ -0.71
NELFE-209ENST00000488426 WFDC11Q8NEX6 87 aa10.6□□□□□ -0.71
NELFE-209ENST00000488426 OR5M8Q8NGP6 311 aa10.6□□□□□ -0.71
NELFE-209ENST00000488426 COQ8AQ8NI60 647 aa10.6□□□□□ -0.71
NELFE-209ENST00000488426 CASTOR1Q8WTX7 329 aa10.6□□□□□ -0.71
NELFE-209ENST00000488426 KIRREL1Q96J84 757 aa10.6□□□□□ -0.71
NELFE-209ENST00000488426 HYLS1Q96M11 299 aa10.6□□□□□ -0.71
NELFE-209ENST00000488426 NCOR1P1Q9H4R4 102 aa10.6□□□□□ -0.71
NELFE-209ENST00000488426 TAF9BQ9HBM6 251 aa10.6□□□□□ -0.71
NELFE-209ENST00000488426 PIPOXQ9P0Z9 390 aa10.6□□□□□ -0.71
NELFE-209ENST00000488426 OPN4Q9UHM6 478 aa10.6□□□□□ -0.71
NELFE-209ENST00000488426 ZANQ9Y493 2812 aa10.6□□□□□ -0.71
NELFE-209ENST00000488426 DBX1A6NMT0 343 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 IFNA2P01563 188 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 PPOXP50336 477 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 H2BFSP57053 126 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 PIGPP57054 158 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 C2orf68Q2NKX9 166 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 DEFB113Q30KQ7 82 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 ZCCHC24Q8N2G6 241 aaKnown RBP10.59□□□□□ -0.71
NELFE-209ENST00000488426 OR5D13Q8NGL4 314 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 TMUB1Q9BVT8 246 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 CHIAQ9BZP6 476 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 FAM234AQ9H0X4 552 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 OR2W1Q9Y3N9 320 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 TRAV39A0A0B4J263 110 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 TRAV38-1A0A0B4J264 116 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 TEX13DA0A0J9YY54 714 aaPredicted RBP10.59□□□□□ -0.71
NELFE-209ENST00000488426 SMLR1H3BR10 107 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 TMEM178BH3BS89 294 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 LGALS8O00214 317 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 RGS11O94810 467 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 RBMXP38159 391 aaKnown RBP10.59□□□□□ -0.71
NELFE-209ENST00000488426 GLIPR1P48060 266 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 RND3P61587 244 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 FAM201AQ5SY85 155 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 C5orf24Q7Z6I8 188 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 LINC00469Q8N7U9 141 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 ZNF565Q8N9K5 539 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 OR2T35Q8NGX2 323 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 IL1F10Q8WWZ1 152 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 TMEM246Q9BRR3 403 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 DNTTIP1Q9H147 329 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 ZNF665Q9H7R5 613 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 NAA60Q9H7X0 242 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 SLC2A9Q9NRM0 540 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 KCNIP3Q9Y2W7 256 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 MAB21L2Q9Y586 359 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 ARFGEF3Q5TH69 2177 aa10.59□□□□□ -0.71
NELFE-209ENST00000488426 RAI1Q7Z5J4 1906 aaPredicted RBP10.58□□□□□ -0.72
NELFE-209ENST00000488426 C12orf77C9JDV5 145 aa10.58□□□□□ -0.72
NELFE-209ENST00000488426 NDUFA2O43678 99 aa10.58□□□□□ -0.72
NELFE-209ENST00000488426 SRSF4Q08170 494 aaKnown RBP10.58□□□□□ -0.72
NELFE-209ENST00000488426 SLC9A3R2Q15599 337 aa10.58□□□□□ -0.72
NELFE-209ENST00000488426 CR1LQ2VPA4 569 aa10.58□□□□□ -0.72
NELFE-209ENST00000488426 LY6G6FQ5SQ64 297 aa10.58□□□□□ -0.72
NELFE-209ENST00000488426 ZNF788Q6ZQV5 615 aa10.58□□□□□ -0.72
NELFE-209ENST00000488426 TGIF2LYQ8IUE0 185 aa10.58□□□□□ -0.72
NELFE-209ENST00000488426 RTN4IP1Q8WWV3 396 aaPredicted RBP10.58□□□□□ -0.72
NELFE-209ENST00000488426 GALMQ96C23 342 aa10.58□□□□□ -0.72
NELFE-209ENST00000488426 MBD6Q96DN6 1003 aa10.58□□□□□ -0.72
NELFE-209ENST00000488426 GALNT14Q96FL9 552 aa10.58□□□□□ -0.72
NELFE-209ENST00000488426 SLC5A7Q9GZV3 580 aa10.58□□□□□ -0.72
NELFE-209ENST00000488426 UBTD1Q9HAC8 227 aa10.58□□□□□ -0.72
NELFE-209ENST00000488426 TMEM106BQ9NUM4 274 aa10.58□□□□□ -0.72
NELFE-209ENST00000488426 ODAMA1E959 279 aa10.57□□□□□ -0.72
NELFE-209ENST00000488426 NKX6-3A6NJ46 265 aa10.57□□□□□ -0.72
NELFE-209ENST00000488426 FAM25EA8MYX2 175 aa10.57□□□□□ -0.72
NELFE-209ENST00000488426 GPR31O00270 319 aa10.57□□□□□ -0.72
NELFE-209ENST00000488426 HSPA12AO43301 675 aa10.57□□□□□ -0.72
NELFE-209ENST00000488426 HEXAP06865 529 aa10.57□□□□□ -0.72
NELFE-209ENST00000488426 GNRHRP30968 328 aa10.57□□□□□ -0.72
NELFE-209ENST00000488426 EDDM3AQ14507 147 aa10.57□□□□□ -0.72
NELFE-209ENST00000488426 DCAF12L2Q5VW00 463 aa10.57□□□□□ -0.72
NELFE-209ENST00000488426 PRR18Q8N4B5 295 aa10.57□□□□□ -0.72
NELFE-209ENST00000488426 ZNRF1Q8ND25 227 aa10.57□□□□□ -0.72
NELFE-209ENST00000488426 SECTM1Q8WVN6 248 aa10.57□□□□□ -0.72
NELFE-209ENST00000488426 GAFA1Q96PS6 74 aa10.57□□□□□ -0.72
NELFE-209ENST00000488426 SUCNR1Q9BXA5 334 aa10.57□□□□□ -0.72
NELFE-209ENST00000488426 TOLLIPQ9H0E2 274 aa10.57□□□□□ -0.72
NELFE-209ENST00000488426 GSX1Q9H4S2 264 aaPredicted RBP10.57□□□□□ -0.72
NELFE-209ENST00000488426 RAB18Q9NP72 206 aa10.57□□□□□ -0.72
NELFE-209ENST00000488426 OR1A1Q9P1Q5 309 aa10.57□□□□□ -0.72
NELFE-209ENST00000488426 CSPG4Q6UVK1 2322 aa10.57□□□□□ -0.72
NELFE-209ENST00000488426 PPIAL4EA0A075B759 164 aa10.57□□□□□ -0.72
NELFE-209ENST00000488426 IGKV1D-13A0A0B4J2D9 117 aa10.57□□□□□ -0.72
NELFE-209ENST00000488426 IGHV1-69-2A0A0G2JMI3 117 aa10.57□□□□□ -0.72
NELFE-209ENST00000488426 PPIAL4DF5H284 164 aa10.57□□□□□ -0.72
NELFE-209ENST00000488426 G3V3Q6 166 aa10.57□□□□□ -0.72
NELFE-209ENST00000488426 SIGLEC5O15389 551 aa10.57□□□□□ -0.72
NELFE-209ENST00000488426 SIX6O95475 246 aa10.57□□□□□ -0.72
NELFE-209ENST00000488426 HBZP02008 142 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms