RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 C16orf95Q9H693 158 aa0.95□□□□□ -2.26
CCDC66-221ENST00000487739 C11orf49Q9H6J7 331 aa0.95□□□□□ -2.26
CCDC66-221ENST00000487739 AGPAT3Q9NRZ7 376 aa0.95□□□□□ -2.26
CCDC66-221ENST00000487739 COL4A1P02462 1669 aa0.94□□□□□ -2.26
CCDC66-221ENST00000487739 PTPRJQ12913 1337 aa0.94□□□□□ -2.26
CCDC66-221ENST00000487739 C19orf71A6NCJ1 209 aa0.94□□□□□ -2.26
CCDC66-221ENST00000487739 EFCAB9A8MZ26 197 aa0.94□□□□□ -2.26
CCDC66-221ENST00000487739 BOLA2-SMG1P6H3BVE0 249 aa0.94□□□□□ -2.26
CCDC66-221ENST00000487739 CRXO43186 299 aaPredicted RBP0.94□□□□□ -2.26
CCDC66-221ENST00000487739 DENRO43583 198 aaKnown RBP0.94□□□□□ -2.26
CCDC66-221ENST00000487739 CTSEP14091 401 aa0.94□□□□□ -2.26
CCDC66-221ENST00000487739 NQO1P15559 274 aaKnown RBP0.94□□□□□ -2.26
CCDC66-221ENST00000487739 ATF1P18846 271 aa0.94□□□□□ -2.26
CCDC66-221ENST00000487739 UGT2B10P36537 528 aa0.94□□□□□ -2.26
CCDC66-221ENST00000487739 PPP1CCP36873 323 aaKnown RBP0.94□□□□□ -2.26
CCDC66-221ENST00000487739 C1QTNF8P60827 252 aa0.94□□□□□ -2.26
CCDC66-221ENST00000487739 ZNF117Q03924 483 aa0.94□□□□□ -2.26
CCDC66-221ENST00000487739 PAFAH1B3Q15102 231 aaKnown RBP0.94□□□□□ -2.26
CCDC66-221ENST00000487739 MAPK14Q16539 360 aa0.94□□□□□ -2.26
CCDC66-221ENST00000487739 PSG3Q16557 428 aa0.94□□□□□ -2.26
CCDC66-221ENST00000487739 HENMT1Q5T8I9 393 aaKnown RBP0.94□□□□□ -2.26
CCDC66-221ENST00000487739 VN1R4Q7Z5H5 301 aa0.94□□□□□ -2.26
CCDC66-221ENST00000487739 MRPL52Q86TS9 123 aaKnown RBP0.94□□□□□ -2.26
CCDC66-221ENST00000487739 ZBTB8OSQ8IWT0 167 aa0.94□□□□□ -2.26
CCDC66-221ENST00000487739 TCAIMQ8N3R3 496 aa0.94□□□□□ -2.26
CCDC66-221ENST00000487739 ACBD4Q8NC06 268 aa0.94□□□□□ -2.26
CCDC66-221ENST00000487739 ANGPTL6Q8NI99 470 aa0.94□□□□□ -2.26
CCDC66-221ENST00000487739 ZNF625Q96I27 306 aaPredicted RBP0.94□□□□□ -2.26
CCDC66-221ENST00000487739 NAP1L5Q96NT1 182 aaPredicted RBP0.94□□□□□ -2.26
CCDC66-221ENST00000487739 UPK3BQ9BT76 320 aa0.94□□□□□ -2.26
CCDC66-221ENST00000487739 XKR8Q9H6D3 395 aa0.94□□□□□ -2.26
CCDC66-221ENST00000487739 METTL8Q9H825 291 aaKnown RBP0.94□□□□□ -2.26
CCDC66-221ENST00000487739 STK38LQ9Y2H1 464 aa0.94□□□□□ -2.26
CCDC66-221ENST00000487739 AMMECR1Q9Y4X0 333 aaPredicted RBP0.94□□□□□ -2.26
CCDC66-221ENST00000487739 DOCK10Q96BY6 2186 aa0.93□□□□□ -2.26
CCDC66-221ENST00000487739 MUC21A0A0G2JKD1 596 aa0.93□□□□□ -2.26
CCDC66-221ENST00000487739 A0A0G2JQZ4 141 aa0.93□□□□□ -2.26
CCDC66-221ENST00000487739 LOC100506127A0A0U1RQW1 187 aa0.93□□□□□ -2.26
CCDC66-221ENST00000487739 MUC21A0A140T8X8 626 aa0.93□□□□□ -2.26
CCDC66-221ENST00000487739 ZNF860A6NHJ4 632 aa0.93□□□□□ -2.26
CCDC66-221ENST00000487739 C9J4A7 227 aa0.93□□□□□ -2.26
CCDC66-221ENST00000487739 SULT1C2O00338 296 aa0.93□□□□□ -2.26
CCDC66-221ENST00000487739 TNFAIP8O95379 198 aa0.93□□□□□ -2.26
CCDC66-221ENST00000487739 S100A9P06702 114 aaKnown RBP0.93□□□□□ -2.26
CCDC66-221ENST00000487739 ORM2P19652 201 aa0.93□□□□□ -2.26
CCDC66-221ENST00000487739 RCVRNP35243 200 aa0.93□□□□□ -2.26
CCDC66-221ENST00000487739 MAGEA6P43360 314 aa0.93□□□□□ -2.26
CCDC66-221ENST00000487739 LPAR6P43657 344 aa0.93□□□□□ -2.26
CCDC66-221ENST00000487739 PSMD7P51665 324 aa0.93□□□□□ -2.26
CCDC66-221ENST00000487739 PRDX4Q13162 271 aa0.93□□□□□ -2.26
CCDC66-221ENST00000487739 PDK2Q15119 407 aa0.93□□□□□ -2.26
CCDC66-221ENST00000487739 Q3ZCU0 254 aa0.93□□□□□ -2.26
CCDC66-221ENST00000487739 CENPWQ5EE01 88 aa0.93□□□□□ -2.26
CCDC66-221ENST00000487739 LGALS9CQ6DKI2 356 aa0.93□□□□□ -2.26
CCDC66-221ENST00000487739 XKRXQ6PP77 449 aa0.93□□□□□ -2.26
CCDC66-221ENST00000487739 ZNF75CPQ92670 426 aaPredicted RBP0.93□□□□□ -2.26
CCDC66-221ENST00000487739 GTF2H4Q92759 462 aa0.93□□□□□ -2.26
CCDC66-221ENST00000487739 CCDC127Q96BQ5 260 aa0.93□□□□□ -2.26
CCDC66-221ENST00000487739 SERPINB11Q96P15 392 aa0.93□□□□□ -2.26
CCDC66-221ENST00000487739 SLC19A3Q9BZV2 496 aa0.93□□□□□ -2.26
CCDC66-221ENST00000487739 SMDT1Q9H4I9 107 aa0.93□□□□□ -2.26
CCDC66-221ENST00000487739 PSORS1C2Q9UIG4 136 aa0.93□□□□□ -2.26
CCDC66-221ENST00000487739 SCML1Q9UN30 329 aa0.93□□□□□ -2.26
CCDC66-221ENST00000487739 DSCAMO60469 2012 aa0.93□□□□□ -2.26
CCDC66-221ENST00000487739 LY6HO94772 140 aa0.92□□□□□ -2.26
CCDC66-221ENST00000487739 ASS1P00966 412 aaKnown RBP0.92□□□□□ -2.26
CCDC66-221ENST00000487739 IVLP07476 585 aa0.92□□□□□ -2.26
CCDC66-221ENST00000487739 FBP1P09467 338 aa0.92□□□□□ -2.26
CCDC66-221ENST00000487739 SLC35E2BP0CK96 405 aa0.92□□□□□ -2.26
CCDC66-221ENST00000487739 LIMS3P0CW19 117 aa0.92□□□□□ -2.26
CCDC66-221ENST00000487739 LIMS4P0CW20 117 aa0.92□□□□□ -2.26
CCDC66-221ENST00000487739 GZMBP10144 247 aa0.92□□□□□ -2.26
CCDC66-221ENST00000487739 SLC25A16P16260 332 aa0.92□□□□□ -2.26
CCDC66-221ENST00000487739 GADD45AP24522 165 aa0.92□□□□□ -2.26
CCDC66-221ENST00000487739 ACTBP60709 375 aa0.92□□□□□ -2.26
CCDC66-221ENST00000487739 ACTG1P63261 375 aa0.92□□□□□ -2.26
CCDC66-221ENST00000487739 SLC35A2P78381 396 aa0.92□□□□□ -2.26
CCDC66-221ENST00000487739 ZBTB6Q15916 424 aa0.92□□□□□ -2.26
CCDC66-221ENST00000487739 MRPL51Q4U2R6 128 aaKnown RBP0.92□□□□□ -2.26
CCDC66-221ENST00000487739 TRMT12Q53H54 448 aaKnown RBP0.92□□□□□ -2.26
CCDC66-221ENST00000487739 TIMM23BQ5SRD1 257 aa0.92□□□□□ -2.26
CCDC66-221ENST00000487739 CCDC121Q6ZUS5 278 aa0.92□□□□□ -2.26
CCDC66-221ENST00000487739 OR11H1Q8NG94 326 aa0.92□□□□□ -2.26
CCDC66-221ENST00000487739 DCANP1Q8TF63 244 aa0.92□□□□□ -2.26
CCDC66-221ENST00000487739 TMIGD2Q96BF3 282 aa0.92□□□□□ -2.26
CCDC66-221ENST00000487739 CCDC124Q96CT7 223 aaKnown RBP0.92□□□□□ -2.26
CCDC66-221ENST00000487739 TMEM56Q96MV1 263 aa0.92□□□□□ -2.26
CCDC66-221ENST00000487739 FAM210AQ96ND0 272 aa0.92□□□□□ -2.26
CCDC66-221ENST00000487739 MED18Q9BUE0 208 aa0.92□□□□□ -2.26
CCDC66-221ENST00000487739 C1QTNF6Q9BXI9 259 aa0.92□□□□□ -2.26
CCDC66-221ENST00000487739 CHST5Q9GZS9 411 aa0.92□□□□□ -2.26
CCDC66-221ENST00000487739 GTSF1LQ9H1H1 148 aa0.92□□□□□ -2.26
CCDC66-221ENST00000487739 MRPS16Q9Y3D3 137 aaKnown RBP0.92□□□□□ -2.26
CCDC66-221ENST00000487739 FLG2Q5D862 2391 aaPredicted RBP0.92□□□□□ -2.26
CCDC66-221ENST00000487739 KIAA0232Q92628 1395 aa0.92□□□□□ -2.26
CCDC66-221ENST00000487739 SCN9AQ15858 1988 aa0.92□□□□□ -2.26
CCDC66-221ENST00000487739 PXDNLA1KZ92 1463 aa0.92□□□□□ -2.26
CCDC66-221ENST00000487739 MDC1Q14676 2089 aaKnown RBP0.92□□□□□ -2.26
CCDC66-221ENST00000487739 USP42Q9H9J4 1324 aaKnown RBP0.91□□□□□ -2.26
CCDC66-221ENST00000487739 LAMB2P55268 1798 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms