RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 OR8U8P0C7N1 319 aa12.53□□□□□ -0.4
SRRT-212ENST00000487311 GTF2F2P13984 249 aa12.53□□□□□ -0.4
SRRT-212ENST00000487311 SPNP16150 400 aa12.53□□□□□ -0.4
SRRT-212ENST00000487311 IGFBP3P17936 291 aaPredicted RBP12.53□□□□□ -0.4
SRRT-212ENST00000487311 GNMTQ14749 295 aa12.53□□□□□ -0.4
SRRT-212ENST00000487311 MMDQ15546 238 aa12.53□□□□□ -0.4
SRRT-212ENST00000487311 SMN1Q16637 294 aaKnown RBP12.53□□□□□ -0.4
SRRT-212ENST00000487311 MORN2Q502X0 79 aa12.53□□□□□ -0.4
SRRT-212ENST00000487311 RPL22L1Q6P5R6 122 aaKnown RBP12.53□□□□□ -0.4
SRRT-212ENST00000487311 TMEM65Q6PI78 240 aa12.53□□□□□ -0.4
SRRT-212ENST00000487311 GAPTQ8N292 157 aa12.53□□□□□ -0.4
SRRT-212ENST00000487311 ZNF184Q99676 751 aaPredicted RBP12.53□□□□□ -0.4
SRRT-212ENST00000487311 SLC29A1Q99808 456 aa12.53□□□□□ -0.4
SRRT-212ENST00000487311 ANKRD60Q9BZ19 345 aa12.53□□□□□ -0.4
SRRT-212ENST00000487311 OR51J1Q9H342 316 aa12.53□□□□□ -0.4
SRRT-212ENST00000487311 ETAA1Q9NY74 926 aa12.53□□□□□ -0.4
SRRT-212ENST00000487311 RCC2Q9P258 522 aaKnown RBP12.53□□□□□ -0.4
SRRT-212ENST00000487311 LYSTQ99698 3801 aa12.52□□□□□ -0.4
SRRT-212ENST00000487311 TRAV8-7A0A075B6U6 113 aa12.52□□□□□ -0.41
SRRT-212ENST00000487311 MCRIP1C9JLW8 97 aa12.52□□□□□ -0.41
SRRT-212ENST00000487311 OVOL1O14753 267 aa12.52□□□□□ -0.41
SRRT-212ENST00000487311 OGG1O15527 345 aa12.52□□□□□ -0.41
SRRT-212ENST00000487311 SPINT2O43291 252 aa12.52□□□□□ -0.41
SRRT-212ENST00000487311 TXNL1O43396 289 aa12.52□□□□□ -0.41
SRRT-212ENST00000487311 LANCL1O43813 399 aa12.52□□□□□ -0.41
SRRT-212ENST00000487311 LALBAP00709 142 aa12.52□□□□□ -0.41
SRRT-212ENST00000487311 CD2P06729 351 aa12.52□□□□□ -0.41
SRRT-212ENST00000487311 FRMD6-AS1P0C7T7 363 aa12.52□□□□□ -0.41
SRRT-212ENST00000487311 OR5H8P0DN80 308 aa12.52□□□□□ -0.41
SRRT-212ENST00000487311 RASSF2P50749 326 aa12.52□□□□□ -0.41
SRRT-212ENST00000487311 SLURP1P55000 103 aa12.52□□□□□ -0.41
SRRT-212ENST00000487311 ACTBP60709 375 aa12.52□□□□□ -0.41
SRRT-212ENST00000487311 CCDC58Q4VC31 144 aa12.52□□□□□ -0.41
SRRT-212ENST00000487311 ZNF429Q86V71 674 aa12.52□□□□□ -0.41
SRRT-212ENST00000487311 STX19Q8N4C7 294 aa12.52□□□□□ -0.41
SRRT-212ENST00000487311 OR52L2PQ8NGH6 319 aa12.52□□□□□ -0.41
SRRT-212ENST00000487311 CASTOR1Q8WTX7 329 aa12.52□□□□□ -0.41
SRRT-212ENST00000487311 Q96MT0 163 aa12.52□□□□□ -0.41
SRRT-212ENST00000487311 S100A13Q99584 98 aa12.52□□□□□ -0.41
SRRT-212ENST00000487311 CHCHD6Q9BRQ6 235 aa12.52□□□□□ -0.41
SRRT-212ENST00000487311 ISYNA1Q9NPH2 558 aa12.52□□□□□ -0.41
SRRT-212ENST00000487311 OR2S2Q9NQN1 319 aa12.52□□□□□ -0.41
SRRT-212ENST00000487311 TPSG1Q9NRR2 321 aa12.52□□□□□ -0.41
SRRT-212ENST00000487311 PAK1IP1Q9NWT1 392 aaPredicted RBP12.52□□□□□ -0.41
SRRT-212ENST00000487311 FAM53CQ9NYF3 392 aa12.52□□□□□ -0.41
SRRT-212ENST00000487311 FBXO7Q9Y3I1 522 aa12.52□□□□□ -0.41
SRRT-212ENST00000487311 RPL36Q9Y3U8 105 aaKnown RBP12.52□□□□□ -0.41
SRRT-212ENST00000487311 LOC100130705A0A1B0GUX0 176 aa12.51□□□□□ -0.41
SRRT-212ENST00000487311 SOX15O60248 233 aa12.51□□□□□ -0.41
SRRT-212ENST00000487311 PPP3R1P63098 170 aa12.51□□□□□ -0.41
SRRT-212ENST00000487311 FAM27D1Q5T7N8 215 aa12.51□□□□□ -0.41
SRRT-212ENST00000487311 STEAP3Q658P3 488 aa12.51□□□□□ -0.41
SRRT-212ENST00000487311 SIGIRRQ6IA17 410 aa12.51□□□□□ -0.41
SRRT-212ENST00000487311 RAB12Q6IQ22 244 aa12.51□□□□□ -0.41
SRRT-212ENST00000487311 MINDY2Q8NBR6 621 aa12.51□□□□□ -0.41
SRRT-212ENST00000487311 NABP2Q9BQ15 211 aa12.51□□□□□ -0.41
SRRT-212ENST00000487311 MRPL20Q9BYC9 149 aaKnown RBP12.51□□□□□ -0.41
SRRT-212ENST00000487311 BANF2Q9H503 90 aa12.51□□□□□ -0.41
SRRT-212ENST00000487311 TAF9BQ9HBM6 251 aa12.51□□□□□ -0.41
SRRT-212ENST00000487311 FGF20Q9NP95 211 aaPredicted RBP12.51□□□□□ -0.41
SRRT-212ENST00000487311 PARP11Q9NR21 331 aa12.51□□□□□ -0.41
SRRT-212ENST00000487311 PEX16Q9Y5Y5 336 aa12.51□□□□□ -0.41
SRRT-212ENST00000487311 STARD9Q9P2P6 4700 aa12.51□□□□□ -0.41
SRRT-212ENST00000487311 TRAV41A0A0B4J266 112 aa12.5□□□□□ -0.41
SRRT-212ENST00000487311 TRBV5-5A0A0J9YX44 114 aa12.5□□□□□ -0.41
SRRT-212ENST00000487311 A0A1W2PPK0 400 aa12.5□□□□□ -0.41
SRRT-212ENST00000487311 TRIM64CA6NLI5 447 aa12.5□□□□□ -0.41
SRRT-212ENST00000487311 ZNF780AO75290 641 aaPredicted RBP12.5□□□□□ -0.41
SRRT-212ENST00000487311 SAP30O75446 220 aa12.5□□□□□ -0.41
SRRT-212ENST00000487311 WBP4O75554 376 aaKnown RBP12.5□□□□□ -0.41
SRRT-212ENST00000487311 CIB2O75838 187 aa12.5□□□□□ -0.41
SRRT-212ENST00000487311 ATP5HO75947 161 aa12.5□□□□□ -0.41
SRRT-212ENST00000487311 HLA-DRB1P01911 266 aa12.5□□□□□ -0.41
SRRT-212ENST00000487311 LYL1P12980 280 aa12.5□□□□□ -0.41
SRRT-212ENST00000487311 GP9P14770 177 aa12.5□□□□□ -0.41
SRRT-212ENST00000487311 BLVRBP30043 206 aaPredicted RBP12.5□□□□□ -0.41
SRRT-212ENST00000487311 RPS11P62280 158 aaKnown RBP eCLIP12.5□□□□□ -0.41
SRRT-212ENST00000487311 NDPQ00604 133 aa12.5□□□□□ -0.41
SRRT-212ENST00000487311 RIPK1Q13546 671 aa12.5□□□□□ -0.41
SRRT-212ENST00000487311 C19orf54Q5BKX5 351 aa12.5□□□□□ -0.41
SRRT-212ENST00000487311 C6orf183Q5T699 404 aa12.5□□□□□ -0.41
SRRT-212ENST00000487311 GLIPR1L1Q6UWM5 242 aa12.5□□□□□ -0.41
SRRT-212ENST00000487311 GHSRQ92847 366 aa12.5□□□□□ -0.41
SRRT-212ENST00000487311 MUL1Q969V5 352 aa12.5□□□□□ -0.41
SRRT-212ENST00000487311 CLEC2DQ9UHP7 191 aa12.5□□□□□ -0.41
SRRT-212ENST00000487311 CSMD3Q7Z407 3707 aa12.5□□□□□ -0.41
SRRT-212ENST00000487311 HYDINQ4G0P3 5121 aa12.49□□□□□ -0.41
SRRT-212ENST00000487311 UBE2QL1A1L167 161 aa12.49□□□□□ -0.41
SRRT-212ENST00000487311 GPX5O75715 221 aa12.49□□□□□ -0.41
SRRT-212ENST00000487311 SC5DO75845 299 aa12.49□□□□□ -0.41
SRRT-212ENST00000487311 EGR2P11161 476 aaPredicted RBP12.49□□□□□ -0.41
SRRT-212ENST00000487311 SNRPBP14678 240 aaKnown RBP12.49□□□□□ -0.41
SRRT-212ENST00000487311 PPP1CCP36873 323 aaKnown RBP12.49□□□□□ -0.41
SRRT-212ENST00000487311 OR3A3P47888 321 aa12.49□□□□□ -0.41
SRRT-212ENST00000487311 C5orf64Q2M2E5 130 aa12.49□□□□□ -0.41
SRRT-212ENST00000487311 LIN54Q6MZP7 749 aa12.49□□□□□ -0.41
SRRT-212ENST00000487311 NPBQ8NG41 125 aa12.49□□□□□ -0.41
SRRT-212ENST00000487311 ZNF251Q9BRH9 671 aa12.49□□□□□ -0.41
SRRT-212ENST00000487311 TOLLIPQ9H0E2 274 aa12.49□□□□□ -0.41
SRRT-212ENST00000487311 MBNL3Q9NUK0 354 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms