RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 YIPF6Q96EC8 236 aa9.65□□□□□ -0.86
HLA-DOA-204ENST00000485901 CENPOQ9BU64 300 aa9.65□□□□□ -0.86
HLA-DOA-204ENST00000485901 TAF9BQ9HBM6 251 aa9.65□□□□□ -0.86
HLA-DOA-204ENST00000485901 GFOD1Q9NXC2 390 aa9.65□□□□□ -0.86
HLA-DOA-204ENST00000485901 PITPNC1Q9UKF7 332 aa9.65□□□□□ -0.86
HLA-DOA-204ENST00000485901 SMIM30A4D0T7 59 aa9.64□□□□□ -0.87
HLA-DOA-204ENST00000485901 FOXI3A8MTJ6 420 aaPredicted RBP9.64□□□□□ -0.87
HLA-DOA-204ENST00000485901 AIREO43918 545 aa9.64□□□□□ -0.87
HLA-DOA-204ENST00000485901 NAPSAO96009 420 aa9.64□□□□□ -0.87
HLA-DOA-204ENST00000485901 CSF1P09603 554 aa9.64□□□□□ -0.87
HLA-DOA-204ENST00000485901 MNDAP41218 407 aa9.64□□□□□ -0.87
HLA-DOA-204ENST00000485901 GNG10P50151 68 aa9.64□□□□□ -0.87
HLA-DOA-204ENST00000485901 MADCAM1Q13477 382 aa9.64□□□□□ -0.87
HLA-DOA-204ENST00000485901 STEAP3Q658P3 488 aa9.64□□□□□ -0.87
HLA-DOA-204ENST00000485901 Q6ZSV7 163 aa9.64□□□□□ -0.87
HLA-DOA-204ENST00000485901 OR10X1Q8NGY0 326 aa9.64□□□□□ -0.87
HLA-DOA-204ENST00000485901 OR1L1Q8NH94 360 aa9.64□□□□□ -0.87
HLA-DOA-204ENST00000485901 UBALD1Q8TB05 177 aa9.64□□□□□ -0.87
HLA-DOA-204ENST00000485901 RPEQ96AT9 228 aa9.64□□□□□ -0.87
HLA-DOA-204ENST00000485901 GALMQ96C23 342 aa9.64□□□□□ -0.87
HLA-DOA-204ENST00000485901 RAB3CQ96E17 227 aa9.64□□□□□ -0.87
HLA-DOA-204ENST00000485901 ARHGAP5-AS1Q96IT6 56 aa9.64□□□□□ -0.87
HLA-DOA-204ENST00000485901 PECRQ9BY49 303 aa9.64□□□□□ -0.87
HLA-DOA-204ENST00000485901 RNF167Q9H6Y7 350 aa9.64□□□□□ -0.87
HLA-DOA-204ENST00000485901 OR2S2Q9NQN1 319 aa9.64□□□□□ -0.87
HLA-DOA-204ENST00000485901 ABRACLQ9P1F3 81 aa9.64□□□□□ -0.87
HLA-DOA-204ENST00000485901 GNG12Q9UBI6 72 aa9.64□□□□□ -0.87
HLA-DOA-204ENST00000485901 AK3Q9UIJ7 227 aa9.64□□□□□ -0.87
HLA-DOA-204ENST00000485901 DAPK2Q9UIK4 370 aa9.64□□□□□ -0.87
HLA-DOA-204ENST00000485901 MGAT4AQ9UM21 535 aa9.64□□□□□ -0.87
HLA-DOA-204ENST00000485901 TCF19Q9Y242 345 aa9.64□□□□□ -0.87
HLA-DOA-204ENST00000485901 TRBV6-6A0A0A6YYG2 114 aa9.63□□□□□ -0.87
HLA-DOA-204ENST00000485901 IGHV3-43A0A0B4J1X8 118 aa9.63□□□□□ -0.87
HLA-DOA-204ENST00000485901 A0A0B4J203 849 aa9.63□□□□□ -0.87
HLA-DOA-204ENST00000485901 A6NDX4 124 aa9.63□□□□□ -0.87
HLA-DOA-204ENST00000485901 TMEM127O75204 238 aa9.63□□□□□ -0.87
HLA-DOA-204ENST00000485901 OPN1MWP04001 364 aa9.63□□□□□ -0.87
HLA-DOA-204ENST00000485901 OPN1MW2P0DN77 364 aa9.63□□□□□ -0.87
HLA-DOA-204ENST00000485901 OPN1MW3P0DN78 364 aa9.63□□□□□ -0.87
HLA-DOA-204ENST00000485901 IGHV3-43DP0DP04 118 aa9.63□□□□□ -0.87
HLA-DOA-204ENST00000485901 IL3RAP26951 378 aa9.63□□□□□ -0.87
HLA-DOA-204ENST00000485901 EFNB2P52799 333 aa9.63□□□□□ -0.87
HLA-DOA-204ENST00000485901 MRPS15P82914 257 aaKnown RBP9.63□□□□□ -0.87
HLA-DOA-204ENST00000485901 HTD2P86397 168 aa9.63□□□□□ -0.87
HLA-DOA-204ENST00000485901 MXD1Q05195 221 aa9.63□□□□□ -0.87
HLA-DOA-204ENST00000485901 PLA2G7Q13093 441 aa9.63□□□□□ -0.87
HLA-DOA-204ENST00000485901 ARL6IP1Q15041 203 aa9.63□□□□□ -0.87
HLA-DOA-204ENST00000485901 PLAC9Q5JTB6 97 aa9.63□□□□□ -0.87
HLA-DOA-204ENST00000485901 SFXN4Q6P4A7 337 aa9.63□□□□□ -0.87
HLA-DOA-204ENST00000485901 MOB1BQ7L9L4 216 aa9.63□□□□□ -0.87
HLA-DOA-204ENST00000485901 CROCCP3Q8IVE0 287 aa9.63□□□□□ -0.87
HLA-DOA-204ENST00000485901 LINC00311Q8N616 119 aa9.63□□□□□ -0.87
HLA-DOA-204ENST00000485901 OR10R2Q8NGX6 335 aa9.63□□□□□ -0.87
HLA-DOA-204ENST00000485901 SETD6Q8TBK2 473 aa9.63□□□□□ -0.87
HLA-DOA-204ENST00000485901 TOMM40LQ969M1 308 aa9.63□□□□□ -0.87
HLA-DOA-204ENST00000485901 CYYR1Q96J86 154 aa9.63□□□□□ -0.87
HLA-DOA-204ENST00000485901 CMSS1Q9BQ75 279 aaKnown RBP9.63□□□□□ -0.87
HLA-DOA-204ENST00000485901 OCSTAMPQ9BR26 566 aa9.63□□□□□ -0.87
HLA-DOA-204ENST00000485901 ATG5Q9H1Y0 275 aa9.63□□□□□ -0.87
HLA-DOA-204ENST00000485901 A0A1W2PPE3 182 aa9.62□□□□□ -0.87
HLA-DOA-204ENST00000485901 RAB27BO00194 218 aa9.62□□□□□ -0.87
HLA-DOA-204ENST00000485901 RGS11O94810 467 aa9.62□□□□□ -0.87
HLA-DOA-204ENST00000485901 GAPDHP04406 335 aaKnown RBP9.62□□□□□ -0.87
HLA-DOA-204ENST00000485901 CLEC2LP0C7M8 214 aa9.62□□□□□ -0.87
HLA-DOA-204ENST00000485901 FAM106CPP0CH98 169 aa9.62□□□□□ -0.87
HLA-DOA-204ENST00000485901 RAB7AP51149 207 aa9.62□□□□□ -0.87
HLA-DOA-204ENST00000485901 SCAND1P57086 179 aa9.62□□□□□ -0.87
HLA-DOA-204ENST00000485901 HERPUD1Q15011 391 aa9.62□□□□□ -0.87
HLA-DOA-204ENST00000485901 HMGN3Q15651 99 aa9.62□□□□□ -0.87
HLA-DOA-204ENST00000485901 BEAN1Q3B7T3 259 aa9.62□□□□□ -0.87
HLA-DOA-204ENST00000485901 MORN2Q502X0 79 aa9.62□□□□□ -0.87
HLA-DOA-204ENST00000485901 IDNKQ5T6J7 187 aa9.62□□□□□ -0.87
HLA-DOA-204ENST00000485901 ZNF880Q6PDB4 577 aa9.62□□□□□ -0.87
HLA-DOA-204ENST00000485901 CCBE1Q6UXH8 406 aaPredicted RBP9.62□□□□□ -0.87
HLA-DOA-204ENST00000485901 NPFFR1Q9GZQ6 430 aa9.62□□□□□ -0.87
HLA-DOA-204ENST00000485901 C12orf4Q9NQ89 552 aa9.62□□□□□ -0.87
HLA-DOA-204ENST00000485901 JPT1Q9UK76 154 aa9.62□□□□□ -0.87
HLA-DOA-204ENST00000485901 SERPINE3A8MV23 424 aa9.61□□□□□ -0.87
HLA-DOA-204ENST00000485901 YPEL1O60688 119 aa9.61□□□□□ -0.87
HLA-DOA-204ENST00000485901 SCGNO76038 276 aa9.61□□□□□ -0.87
HLA-DOA-204ENST00000485901 TSPAN15O95858 294 aa9.61□□□□□ -0.87
HLA-DOA-204ENST00000485901 CD3GP09693 182 aa9.61□□□□□ -0.87
HLA-DOA-204ENST00000485901 SNRPBP14678 240 aaKnown RBP9.61□□□□□ -0.87
HLA-DOA-204ENST00000485901 HIST1H1DP16402 221 aaKnown RBP9.61□□□□□ -0.87
HLA-DOA-204ENST00000485901 KIR2DS4P43632 304 aa9.61□□□□□ -0.87
HLA-DOA-204ENST00000485901 LSM3P62310 102 aaKnown RBP9.61□□□□□ -0.87
HLA-DOA-204ENST00000485901 MOGAT2Q3SYC2 334 aa9.61□□□□□ -0.87
HLA-DOA-204ENST00000485901 CT45A1Q5HYN5 189 aa9.61□□□□□ -0.87
HLA-DOA-204ENST00000485901 LY6G6FQ5SQ64 297 aa9.61□□□□□ -0.87
HLA-DOA-204ENST00000485901 SAMD5Q5TGI4 173 aa9.61□□□□□ -0.87
HLA-DOA-204ENST00000485901 FAM53AQ6NSI3 398 aaPredicted RBP9.61□□□□□ -0.87
HLA-DOA-204ENST00000485901 SLC25A48Q6ZT89 311 aaKnown RBP9.61□□□□□ -0.87
HLA-DOA-204ENST00000485901 THNSL2Q86YJ6 484 aa9.61□□□□□ -0.87
HLA-DOA-204ENST00000485901 OR8H3Q8N146 312 aa9.61□□□□□ -0.87
HLA-DOA-204ENST00000485901 OR52L2PQ8NGH6 319 aa9.61□□□□□ -0.87
HLA-DOA-204ENST00000485901 OR10V1Q8NGI7 309 aa9.61□□□□□ -0.87
HLA-DOA-204ENST00000485901 OR4C13Q8NGP0 309 aa9.61□□□□□ -0.87
HLA-DOA-204ENST00000485901 OR13F1Q8NGS4 319 aa9.61□□□□□ -0.87
HLA-DOA-204ENST00000485901 CT45A3Q8NHU0 189 aa9.61□□□□□ -0.87
HLA-DOA-204ENST00000485901 IL1F10Q8WWZ1 152 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms