RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 IL3RAP26951 378 aa8.3□□□□□ -1.08
HMGN1-215ENST00000485550 MYCNOSP40205 109 aa8.3□□□□□ -1.08
HMGN1-215ENST00000485550 F2RL1P55085 397 aa8.3□□□□□ -1.08
HMGN1-215ENST00000485550 MED21Q13503 144 aa8.3□□□□□ -1.08
HMGN1-215ENST00000485550 GPR176Q14439 515 aa8.3□□□□□ -1.08
HMGN1-215ENST00000485550 PNLIPRP3Q17RR3 467 aa8.3□□□□□ -1.08
HMGN1-215ENST00000485550 DEFB136Q30KP8 78 aa8.3□□□□□ -1.08
HMGN1-215ENST00000485550 CT45A1Q5HYN5 189 aa8.3□□□□□ -1.08
HMGN1-215ENST00000485550 TTC23Q5W5X9 447 aa8.3□□□□□ -1.08
HMGN1-215ENST00000485550 TEX38Q6PEX7 206 aa8.3□□□□□ -1.08
HMGN1-215ENST00000485550 TGIF2LXQ8IUE1 241 aa8.3□□□□□ -1.08
HMGN1-215ENST00000485550 ZNF695Q8IW36 515 aa8.3□□□□□ -1.08
HMGN1-215ENST00000485550 DHRSXQ8N5I4 330 aa8.3□□□□□ -1.08
HMGN1-215ENST00000485550 Q8N6K4 173 aa8.3□□□□□ -1.08
HMGN1-215ENST00000485550 ZNF485Q8NCK3 441 aa8.3□□□□□ -1.08
HMGN1-215ENST00000485550 TMEM104Q8NE00 496 aa8.3□□□□□ -1.08
HMGN1-215ENST00000485550 CT45A3Q8NHU0 189 aa8.3□□□□□ -1.08
HMGN1-215ENST00000485550 TFAP2CQ92754 450 aa8.3□□□□□ -1.08
HMGN1-215ENST00000485550 ST6GALNAC6Q969X2 333 aa8.3□□□□□ -1.08
HMGN1-215ENST00000485550 S1PR3Q99500 378 aa8.3□□□□□ -1.08
HMGN1-215ENST00000485550 RASL11BQ9BPW5 248 aa8.3□□□□□ -1.08
HMGN1-215ENST00000485550 ABCG5Q9H222 651 aa8.3□□□□□ -1.08
HMGN1-215ENST00000485550 DCLRE1BQ9H816 532 aa8.3□□□□□ -1.08
HMGN1-215ENST00000485550 PLSCR3Q9NRY6 295 aa8.3□□□□□ -1.08
HMGN1-215ENST00000485550 CSMD3Q7Z407 3707 aa8.29□□□□□ -1.08
HMGN1-215ENST00000485550 DNAH1Q9P2D7 4330 aa8.29□□□□□ -1.08
HMGN1-215ENST00000485550 MOSP00540 346 aa8.29□□□□□ -1.08
HMGN1-215ENST00000485550 MGMTP16455 207 aa8.29□□□□□ -1.08
HMGN1-215ENST00000485550 CELP19835 753 aa8.29□□□□□ -1.08
HMGN1-215ENST00000485550 CD1BP29016 333 aa8.29□□□□□ -1.08
HMGN1-215ENST00000485550 CAPGP40121 348 aa8.29□□□□□ -1.08
HMGN1-215ENST00000485550 ADARB1P78563 741 aaKnown RBP8.29□□□□□ -1.08
HMGN1-215ENST00000485550 GPR50Q13585 617 aa8.29□□□□□ -1.08
HMGN1-215ENST00000485550 SLC25A48Q6ZT89 311 aaKnown RBP8.29□□□□□ -1.08
HMGN1-215ENST00000485550 IZUMO1Q8IYV9 350 aa8.29□□□□□ -1.08
HMGN1-215ENST00000485550 COMMD1Q8N668 190 aa8.29□□□□□ -1.08
HMGN1-215ENST00000485550 ZNF439Q8NDP4 499 aa8.29□□□□□ -1.08
HMGN1-215ENST00000485550 SETD9Q8NE22 299 aa8.29□□□□□ -1.08
HMGN1-215ENST00000485550 BPIFB6Q8NFQ5 453 aa8.29□□□□□ -1.08
HMGN1-215ENST00000485550 OR52L2PQ8NGH6 319 aa8.29□□□□□ -1.08
HMGN1-215ENST00000485550 FAM46BQ96A09 425 aa8.29□□□□□ -1.08
HMGN1-215ENST00000485550 RAX2Q96IS3 184 aa8.29□□□□□ -1.08
HMGN1-215ENST00000485550 P2RX4Q99571 388 aa8.29□□□□□ -1.08
HMGN1-215ENST00000485550 HSPB9Q9BQS6 159 aa8.29□□□□□ -1.08
HMGN1-215ENST00000485550 TAF9BQ9HBM6 251 aa8.29□□□□□ -1.08
HMGN1-215ENST00000485550 SPACA1Q9HBV2 294 aa8.29□□□□□ -1.08
HMGN1-215ENST00000485550 OR2S2Q9NQN1 319 aa8.29□□□□□ -1.08
HMGN1-215ENST00000485550 LIN7CQ9NUP9 197 aaKnown RBP8.29□□□□□ -1.08
HMGN1-215ENST00000485550 RCC2Q9P258 522 aaKnown RBP8.29□□□□□ -1.08
HMGN1-215ENST00000485550 HUWE1Q7Z6Z7 4374 aaKnown RBP8.29□□□□□ -1.08
HMGN1-215ENST00000485550 H0YHG0 523 aa8.28□□□□□ -1.08
HMGN1-215ENST00000485550 CCL24O00175 119 aa8.28□□□□□ -1.08
HMGN1-215ENST00000485550 GNAO1P09471 354 aa8.28□□□□□ -1.08
HMGN1-215ENST00000485550 SLC2A2P11168 524 aaPredicted RBP8.28□□□□□ -1.08
HMGN1-215ENST00000485550 FSTP19883 344 aa8.28□□□□□ -1.08
HMGN1-215ENST00000485550 MYF6P23409 242 aa8.28□□□□□ -1.08
HMGN1-215ENST00000485550 SOX6P35712 828 aa8.28□□□□□ -1.08
HMGN1-215ENST00000485550 DGCR2P98153 550 aa8.28□□□□□ -1.08
HMGN1-215ENST00000485550 INSL4Q14641 139 aa8.28□□□□□ -1.08
HMGN1-215ENST00000485550 GNMTQ14749 295 aa8.28□□□□□ -1.08
HMGN1-215ENST00000485550 CXorf66Q5JRM2 361 aaPredicted RBP8.28□□□□□ -1.08
HMGN1-215ENST00000485550 C6orf183Q5T699 404 aa8.28□□□□□ -1.08
HMGN1-215ENST00000485550 SIGIRRQ6IA17 410 aa8.28□□□□□ -1.08
HMGN1-215ENST00000485550 OR10K2Q6IF99 312 aa8.28□□□□□ -1.08
HMGN1-215ENST00000485550 LAIR2Q6ISS4 152 aa8.28□□□□□ -1.08
HMGN1-215ENST00000485550 UNQ9370/PRO34162Q6UXP9 181 aa8.28□□□□□ -1.08
HMGN1-215ENST00000485550 AHSA2Q719I0 299 aa8.28□□□□□ -1.08
HMGN1-215ENST00000485550 C8orf31Q8N9H6 132 aa8.28□□□□□ -1.08
HMGN1-215ENST00000485550 MRPS24Q96EL2 167 aaKnown RBP8.28□□□□□ -1.08
HMGN1-215ENST00000485550 RITA1Q96K30 269 aa8.28□□□□□ -1.08
HMGN1-215ENST00000485550 DERL3Q96Q80 235 aa8.28□□□□□ -1.08
HMGN1-215ENST00000485550 PRR25Q96S07 402 aa8.28□□□□□ -1.08
HMGN1-215ENST00000485550 MCRIP2Q9BUT9 160 aaKnown RBP8.28□□□□□ -1.08
HMGN1-215ENST00000485550 LSM4Q9Y4Z0 139 aaKnown RBP8.28□□□□□ -1.08
HMGN1-215ENST00000485550 EFCAB10A6NFE3 127 aa8.27□□□□□ -1.09
HMGN1-215ENST00000485550 MYL12BO14950 172 aa8.27□□□□□ -1.09
HMGN1-215ENST00000485550 RRP9O43818 475 aaKnown RBP8.27□□□□□ -1.09
HMGN1-215ENST00000485550 FUT3P21217 361 aa8.27□□□□□ -1.09
HMGN1-215ENST00000485550 CNTFRP26992 372 aa8.27□□□□□ -1.09
HMGN1-215ENST00000485550 PPP1CCP36873 323 aaKnown RBP8.27□□□□□ -1.09
HMGN1-215ENST00000485550 LUMP51884 338 aaPredicted RBP8.27□□□□□ -1.09
HMGN1-215ENST00000485550 TAS2R43P59537 309 aa8.27□□□□□ -1.09
HMGN1-215ENST00000485550 RCN1Q15293 331 aa8.27□□□□□ -1.09
HMGN1-215ENST00000485550 MORN2Q502X0 79 aa8.27□□□□□ -1.09
HMGN1-215ENST00000485550 LYPD6Q86Y78 171 aa8.27□□□□□ -1.09
HMGN1-215ENST00000485550 C8orf59Q8N0T1 100 aaPredicted RBP8.27□□□□□ -1.09
HMGN1-215ENST00000485550 GAPTQ8N292 157 aa8.27□□□□□ -1.09
HMGN1-215ENST00000485550 Q96M66 194 aa8.27□□□□□ -1.09
HMGN1-215ENST00000485550 GON7Q9BXV9 100 aa8.27□□□□□ -1.09
HMGN1-215ENST00000485550 PALMDQ9NP74 551 aa8.27□□□□□ -1.09
HMGN1-215ENST00000485550 RAB9BQ9NP90 201 aa8.27□□□□□ -1.09
HMGN1-215ENST00000485550 KCNIP1Q9NZI2 227 aa8.27□□□□□ -1.09
HMGN1-215ENST00000485550 PSORS1C1Q9UIG5 152 aa8.27□□□□□ -1.09
HMGN1-215ENST00000485550 WSB1Q9Y6I7 421 aa8.27□□□□□ -1.09
HMGN1-215ENST00000485550 TXNL1O43396 289 aa8.26□□□□□ -1.09
HMGN1-215ENST00000485550 PDCD6O75340 191 aa8.26□□□□□ -1.09
HMGN1-215ENST00000485550 SC5DO75845 299 aa8.26□□□□□ -1.09
HMGN1-215ENST00000485550 ELANEP08246 267 aa8.26□□□□□ -1.09
HMGN1-215ENST00000485550 LYL1P12980 280 aa8.26□□□□□ -1.09
HMGN1-215ENST00000485550 VDAC1P21796 283 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms