RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 IGHV1-3A0A0C4DH29 117 aa10.19□□□□□ -0.78
HDAC6-227ENST00000485102 PDCD5O14737 125 aa10.19□□□□□ -0.78
HDAC6-227ENST00000485102 HSD17B6O14756 317 aa10.19□□□□□ -0.78
HDAC6-227ENST00000485102 ZNF780AO75290 641 aaPredicted RBP10.19□□□□□ -0.78
HDAC6-227ENST00000485102 LALBAP00709 142 aa10.19□□□□□ -0.78
HDAC6-227ENST00000485102 HCKP08631 526 aa10.19□□□□□ -0.78
HDAC6-227ENST00000485102 MYL9P24844 172 aa10.19□□□□□ -0.78
HDAC6-227ENST00000485102 CD1BP29016 333 aa10.19□□□□□ -0.78
HDAC6-227ENST00000485102 BDKRB2P30411 391 aa10.19□□□□□ -0.78
HDAC6-227ENST00000485102 MAP2K4P45985 399 aa10.19□□□□□ -0.78
HDAC6-227ENST00000485102 INSL3P51460 131 aa10.19□□□□□ -0.78
HDAC6-227ENST00000485102 LUMP51884 338 aaPredicted RBP10.19□□□□□ -0.78
HDAC6-227ENST00000485102 GPR176Q14439 515 aa10.19□□□□□ -0.78
HDAC6-227ENST00000485102 Q3ZCU0 254 aa10.19□□□□□ -0.78
HDAC6-227ENST00000485102 HSD17B12Q53GQ0 312 aa10.19□□□□□ -0.78
HDAC6-227ENST00000485102 GLT8D1Q68CQ7 371 aa10.19□□□□□ -0.78
HDAC6-227ENST00000485102 ZNF529Q6P280 563 aa10.19□□□□□ -0.78
HDAC6-227ENST00000485102 LCNL1Q6ZST4 164 aa10.19□□□□□ -0.78
HDAC6-227ENST00000485102 TMEM104Q8NE00 496 aa10.19□□□□□ -0.78
HDAC6-227ENST00000485102 OR10X1Q8NGY0 326 aa10.19□□□□□ -0.78
HDAC6-227ENST00000485102 OR2T10Q8NGZ9 312 aa10.19□□□□□ -0.78
HDAC6-227ENST00000485102 RFESDQ8TAC1 157 aa10.19□□□□□ -0.78
HDAC6-227ENST00000485102 ST6GALNAC6Q969X2 333 aa10.19□□□□□ -0.78
HDAC6-227ENST00000485102 CHCHD6Q9BRQ6 235 aa10.19□□□□□ -0.78
HDAC6-227ENST00000485102 TMED9Q9BVK6 235 aa10.19□□□□□ -0.78
HDAC6-227ENST00000485102 IFT22Q9H7X7 185 aa10.19□□□□□ -0.78
HDAC6-227ENST00000485102 GHRLQ9UBU3 117 aa10.19□□□□□ -0.78
HDAC6-227ENST00000485102 STUB1Q9UNE7 303 aa10.19□□□□□ -0.78
HDAC6-227ENST00000485102 SACSQ9NZJ4 4579 aa10.19□□□□□ -0.78
HDAC6-227ENST00000485102 PNMA8CA0A1B0GUJ8 204 aa10.18□□□□□ -0.78
HDAC6-227ENST00000485102 TRDV1A0A1B0GX56 115 aa10.18□□□□□ -0.78
HDAC6-227ENST00000485102 SEC14L6B5MCN3 397 aa10.18□□□□□ -0.78
HDAC6-227ENST00000485102 IGHV3-7P01780 117 aa10.18□□□□□ -0.78
HDAC6-227ENST00000485102 IGF1P05019 195 aa10.18□□□□□ -0.78
HDAC6-227ENST00000485102 PSMB8P28062 276 aa10.18□□□□□ -0.78
HDAC6-227ENST00000485102 FGF9P31371 208 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-227ENST00000485102 NEDD8Q15843 81 aa10.18□□□□□ -0.78
HDAC6-227ENST00000485102 NHLRC3Q5JS37 347 aa10.18□□□□□ -0.78
HDAC6-227ENST00000485102 XAF1Q6GPH4 301 aa10.18□□□□□ -0.78
HDAC6-227ENST00000485102 CD200R1LQ6Q8B3 271 aa10.18□□□□□ -0.78
HDAC6-227ENST00000485102 CEACAM19Q7Z692 300 aa10.18□□□□□ -0.78
HDAC6-227ENST00000485102 ZFP41Q8N8Y5 198 aa10.18□□□□□ -0.78
HDAC6-227ENST00000485102 PLPPR1Q8TBJ4 325 aa10.18□□□□□ -0.78
HDAC6-227ENST00000485102 MYOZ3Q8TDC0 251 aa10.18□□□□□ -0.78
HDAC6-227ENST00000485102 C4orf3Q8WVX3 66 aa10.18□□□□□ -0.78
HDAC6-227ENST00000485102 MUL1Q969V5 352 aa10.18□□□□□ -0.78
HDAC6-227ENST00000485102 DERL3Q96Q80 235 aa10.18□□□□□ -0.78
HDAC6-227ENST00000485102 PRR25Q96S07 402 aa10.18□□□□□ -0.78
HDAC6-227ENST00000485102 UQCC2Q9BRT2 126 aa10.18□□□□□ -0.78
HDAC6-227ENST00000485102 ZNF256Q9Y2P7 627 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-227ENST00000485102 TRBV5-7A0A0A0MS05 114 aa10.17□□□□□ -0.78
HDAC6-227ENST00000485102 NCBP2LA6PVI3 153 aaKnown RBP10.17□□□□□ -0.78
HDAC6-227ENST00000485102 SC5DO75845 299 aa10.17□□□□□ -0.78
HDAC6-227ENST00000485102 UCHL1P09936 223 aa10.17□□□□□ -0.78
HDAC6-227ENST00000485102 UBBP0CG47 229 aa10.17□□□□□ -0.78
HDAC6-227ENST00000485102 SRMP19623 302 aa10.17□□□□□ -0.78
HDAC6-227ENST00000485102 SSTR5P35346 364 aa10.17□□□□□ -0.78
HDAC6-227ENST00000485102 ECI1P42126 302 aa10.17□□□□□ -0.78
HDAC6-227ENST00000485102 SOX2P48431 317 aa10.17□□□□□ -0.78
HDAC6-227ENST00000485102 ZNF137PP52743 207 aa10.17□□□□□ -0.78
HDAC6-227ENST00000485102 RAB25P57735 213 aa10.17□□□□□ -0.78
HDAC6-227ENST00000485102 RPS11P62280 158 aaKnown RBP eCLIP10.17□□□□□ -0.78
HDAC6-227ENST00000485102 RUNX1Q01196 453 aa10.17□□□□□ -0.78
HDAC6-227ENST00000485102 DEFB136Q30KP8 78 aa10.17□□□□□ -0.78
HDAC6-227ENST00000485102 CASC10Q5T4H9 136 aa10.17□□□□□ -0.78
HDAC6-227ENST00000485102 MOB3BQ86TA1 216 aa10.17□□□□□ -0.78
HDAC6-227ENST00000485102 TPRA1Q86W33 373 aa10.17□□□□□ -0.78
HDAC6-227ENST00000485102 CROCCP3Q8IVE0 287 aa10.17□□□□□ -0.78
HDAC6-227ENST00000485102 FAM71E2Q8N5Q1 922 aa10.17□□□□□ -0.78
HDAC6-227ENST00000485102 MUC7Q8TAX7 377 aa10.17□□□□□ -0.78
HDAC6-227ENST00000485102 MRGPRDQ8TDS7 321 aa10.17□□□□□ -0.78
HDAC6-227ENST00000485102 OR14A2Q96R54 314 aa10.17□□□□□ -0.78
HDAC6-227ENST00000485102 S1PR3Q99500 378 aa10.17□□□□□ -0.78
HDAC6-227ENST00000485102 GPER1Q99527 375 aa10.17□□□□□ -0.78
HDAC6-227ENST00000485102 TRAV1-2A0A0B4J238 106 aa10.16□□□□□ -0.78
HDAC6-227ENST00000485102 C15orf65H3BRN8 121 aa10.16□□□□□ -0.78
HDAC6-227ENST00000485102 HSPB6O14558 160 aa10.16□□□□□ -0.78
HDAC6-227ENST00000485102 ORC5O43913 435 aa10.16□□□□□ -0.78
HDAC6-227ENST00000485102 NOL3O60936 208 aaKnown RBP10.16□□□□□ -0.78
HDAC6-227ENST00000485102 MOSP00540 346 aa10.16□□□□□ -0.78
HDAC6-227ENST00000485102 OR5H8P0DN80 308 aa10.16□□□□□ -0.78
HDAC6-227ENST00000485102 CD36P16671 472 aa10.16□□□□□ -0.78
HDAC6-227ENST00000485102 IGFBP3P17936 291 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-227ENST00000485102 ZNF93P35789 620 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-227ENST00000485102 RPL5P46777 297 aaKnown RBP10.16□□□□□ -0.78
HDAC6-227ENST00000485102 GNG10P50151 68 aa10.16□□□□□ -0.78
HDAC6-227ENST00000485102 GPR141Q7Z602 305 aa10.16□□□□□ -0.78
HDAC6-227ENST00000485102 RTN4IP1Q8WWV3 396 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-227ENST00000485102 KCTD7Q96MP8 289 aa10.16□□□□□ -0.78
HDAC6-227ENST00000485102 BCL7BQ9BQE9 202 aa10.16□□□□□ -0.78
HDAC6-227ENST00000485102 DPCDQ9BVM2 203 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-227ENST00000485102 IL36GQ9NZH8 169 aa10.16□□□□□ -0.78
HDAC6-227ENST00000485102 SMAD5-AS1Q9Y6J3 95 aa10.16□□□□□ -0.78
HDAC6-227ENST00000485102 GABRPO00591 440 aa10.15□□□□□ -0.78
HDAC6-227ENST00000485102 TXNL1O43396 289 aa10.15□□□□□ -0.78
HDAC6-227ENST00000485102 SOX6P35712 828 aa10.15□□□□□ -0.78
HDAC6-227ENST00000485102 KIAA0141Q14154 515 aaPredicted RBP10.15□□□□□ -0.78
HDAC6-227ENST00000485102 LTC4SQ16873 150 aa10.15□□□□□ -0.78
HDAC6-227ENST00000485102 ZNF260Q3ZCT1 412 aa10.15□□□□□ -0.78
HDAC6-227ENST00000485102 DDI2Q5TDH0 399 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms