RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 TOMM40LQ969M1 308 aa14.44□□□□□ -0.1
HDAC6-225ENST00000483506 KCTD7Q96MP8 289 aa14.44□□□□□ -0.1
HDAC6-225ENST00000483506 AK3Q9UIJ7 227 aa14.44□□□□□ -0.1
HDAC6-225ENST00000483506 IGHV3-43A0A0B4J1X8 118 aa14.43□□□□□ -0.1
HDAC6-225ENST00000483506 IGHV3-43DP0DP04 118 aa14.43□□□□□ -0.1
HDAC6-225ENST00000483506 GADD45AP24522 165 aa14.43□□□□□ -0.1
HDAC6-225ENST00000483506 ZNF137PP52743 207 aa14.43□□□□□ -0.1
HDAC6-225ENST00000483506 EFNB2P52799 333 aa14.43□□□□□ -0.1
HDAC6-225ENST00000483506 HABP2Q14520 560 aaPredicted RBP14.43□□□□□ -0.1
HDAC6-225ENST00000483506 PLAC9Q5JTB6 97 aa14.43□□□□□ -0.1
HDAC6-225ENST00000483506 FAM53AQ6NSI3 398 aaPredicted RBP14.43□□□□□ -0.1
HDAC6-225ENST00000483506 C11orf88Q6PI97 169 aa14.43□□□□□ -0.1
HDAC6-225ENST00000483506 Q6ZTK2 550 aa14.43□□□□□ -0.1
HDAC6-225ENST00000483506 THNSL2Q86YJ6 484 aa14.43□□□□□ -0.1
HDAC6-225ENST00000483506 CFHR4Q92496 578 aa14.43□□□□□ -0.1
HDAC6-225ENST00000483506 ST6GALNAC6Q969X2 333 aa14.43□□□□□ -0.1
HDAC6-225ENST00000483506 ARHGAP5-AS1Q96IT6 56 aa14.43□□□□□ -0.1
HDAC6-225ENST00000483506 CITED1Q99966 193 aa14.43□□□□□ -0.1
HDAC6-225ENST00000483506 CHCHD6Q9BRQ6 235 aa14.43□□□□□ -0.1
HDAC6-225ENST00000483506 PECRQ9BY49 303 aa14.43□□□□□ -0.1
HDAC6-225ENST00000483506 VCX3AQ9NNX9 186 aa14.43□□□□□ -0.1
HDAC6-225ENST00000483506 GNG12Q9UBI6 72 aa14.43□□□□□ -0.1
HDAC6-225ENST00000483506 JPT1Q9UK76 154 aa14.43□□□□□ -0.1
HDAC6-225ENST00000483506 A0A1W2PPE3 182 aa14.42□□□□□ -0.1
HDAC6-225ENST00000483506 RAB27BO00194 218 aa14.42□□□□□ -0.1
HDAC6-225ENST00000483506 DIAPH2-AS1Q14236 149 aa14.42□□□□□ -0.1
HDAC6-225ENST00000483506 PRR18Q8N4B5 295 aa14.42□□□□□ -0.1
HDAC6-225ENST00000483506 SGMS2Q8NHU3 365 aa14.42□□□□□ -0.1
HDAC6-225ENST00000483506 CENPOQ9BU64 300 aa14.42□□□□□ -0.1
HDAC6-225ENST00000483506 ZNF702PQ9H963 129 aa14.42□□□□□ -0.1
HDAC6-225ENST00000483506 C12orf4Q9NQ89 552 aa14.42□□□□□ -0.1
HDAC6-225ENST00000483506 OR2S2Q9NQN1 319 aa14.42□□□□□ -0.1
HDAC6-225ENST00000483506 MGAT4AQ9UM21 535 aa14.42□□□□□ -0.1
HDAC6-225ENST00000483506 A0A0B4J203 849 aa14.41□□□□□ -0.1
HDAC6-225ENST00000483506 HSD17B6O14756 317 aa14.41□□□□□ -0.1
HDAC6-225ENST00000483506 TIMM23O14925 209 aa14.41□□□□□ -0.1
HDAC6-225ENST00000483506 SLC31A2O15432 143 aa14.41□□□□□ -0.1
HDAC6-225ENST00000483506 YPEL1O60688 119 aa14.41□□□□□ -0.1
HDAC6-225ENST00000483506 OR2F2O95006 317 aa14.41□□□□□ -0.1
HDAC6-225ENST00000483506 SLC2A2P11168 524 aaPredicted RBP14.41□□□□□ -0.1
HDAC6-225ENST00000483506 IL3RAP26951 378 aa14.41□□□□□ -0.1
HDAC6-225ENST00000483506 SDC2P34741 201 aa14.41□□□□□ -0.1
HDAC6-225ENST00000483506 ZNF134P52741 427 aa14.41□□□□□ -0.1
HDAC6-225ENST00000483506 KRTAP10-3P60369 221 aa14.41□□□□□ -0.1
HDAC6-225ENST00000483506 TIMM50Q3ZCQ8 353 aa14.41□□□□□ -0.1
HDAC6-225ENST00000483506 MORN2Q502X0 79 aa14.41□□□□□ -0.1
HDAC6-225ENST00000483506 FBLN7Q53RD9 439 aa14.41□□□□□ -0.1
HDAC6-225ENST00000483506 CT45A1Q5HYN5 189 aa14.41□□□□□ -0.1
HDAC6-225ENST00000483506 SFXN4Q6P4A7 337 aa14.41□□□□□ -0.1
HDAC6-225ENST00000483506 CT45A3Q8NHU0 189 aa14.41□□□□□ -0.1
HDAC6-225ENST00000483506 GALMQ96C23 342 aa14.41□□□□□ -0.1
HDAC6-225ENST00000483506 YIPF6Q96EC8 236 aa14.41□□□□□ -0.1
HDAC6-225ENST00000483506 RBM14Q96PK6 669 aaKnown RBP14.41□□□□□ -0.1
HDAC6-225ENST00000483506 YPEL2Q96QA6 119 aa14.41□□□□□ -0.1
HDAC6-225ENST00000483506 KCNK7Q9Y2U2 307 aa14.41□□□□□ -0.1
HDAC6-225ENST00000483506 LOC100506127A0A0U1RQW1 187 aa14.4□□□□□ -0.1
HDAC6-225ENST00000483506 SMIM30A4D0T7 59 aa14.4□□□□□ -0.1
HDAC6-225ENST00000483506 SCAND1P57086 179 aa14.4□□□□□ -0.1
HDAC6-225ENST00000483506 GNMTQ14749 295 aa14.4□□□□□ -0.1
HDAC6-225ENST00000483506 MOGAT2Q3SYC2 334 aa14.4□□□□□ -0.1
HDAC6-225ENST00000483506 C5orf24Q7Z6I8 188 aa14.4□□□□□ -0.1
HDAC6-225ENST00000483506 DRAM1Q8N682 238 aa14.4□□□□□ -0.1
HDAC6-225ENST00000483506 OR10V1Q8NGI7 309 aa14.4□□□□□ -0.1
HDAC6-225ENST00000483506 OR10R2Q8NGX6 335 aa14.4□□□□□ -0.1
HDAC6-225ENST00000483506 OR56B4Q8NH76 319 aa14.4□□□□□ -0.1
HDAC6-225ENST00000483506 OR2T6Q8NHC8 308 aa14.4□□□□□ -0.1
HDAC6-225ENST00000483506 RAB3CQ96E17 227 aa14.4□□□□□ -0.1
HDAC6-225ENST00000483506 AKR1E2Q96JD6 320 aa14.4□□□□□ -0.1
HDAC6-225ENST00000483506 HDHD3Q9BSH5 251 aaPredicted RBP14.4□□□□□ -0.1
HDAC6-225ENST00000483506 RNF167Q9H6Y7 350 aa14.4□□□□□ -0.1
HDAC6-225ENST00000483506 CHMP1AQ9HD42 196 aaPredicted RBP14.4□□□□□ -0.1
HDAC6-225ENST00000483506 Q9N2K0 584 aa14.4□□□□□ -0.1
HDAC6-225ENST00000483506 ABRACLQ9P1F3 81 aa14.4□□□□□ -0.1
HDAC6-225ENST00000483506 PKD1L1Q8TDX9 2849 aa14.4□□□□□ -0.1
HDAC6-225ENST00000483506 IGHV1-3A0A0C4DH29 117 aa14.39□□□□□ -0.11
HDAC6-225ENST00000483506 METTL21EPA6NDL7 271 aa14.39□□□□□ -0.11
HDAC6-225ENST00000483506 MFNGO00587 321 aa14.39□□□□□ -0.11
HDAC6-225ENST00000483506 RGS11O94810 467 aa14.39□□□□□ -0.11
HDAC6-225ENST00000483506 GAPDHP04406 335 aaKnown RBP14.39□□□□□ -0.11
HDAC6-225ENST00000483506 FAM106CPP0CH98 169 aa14.39□□□□□ -0.11
HDAC6-225ENST00000483506 CD24P25063 80 aa14.39□□□□□ -0.11
HDAC6-225ENST00000483506 OR52L2PQ8NGH6 319 aa14.39□□□□□ -0.11
HDAC6-225ENST00000483506 RTN4IP1Q8WWV3 396 aaPredicted RBP14.39□□□□□ -0.11
HDAC6-225ENST00000483506 CMSS1Q9BQ75 279 aaKnown RBP14.39□□□□□ -0.11
HDAC6-225ENST00000483506 SLC25A33Q9BSK2 321 aa14.39□□□□□ -0.11
HDAC6-225ENST00000483506 ABHD14AQ9BUJ0 271 aa14.39□□□□□ -0.11
HDAC6-225ENST00000483506 PRSS22Q9GZN4 317 aa14.39□□□□□ -0.11
HDAC6-225ENST00000483506 DAPK2Q9UIK4 370 aa14.39□□□□□ -0.11
HDAC6-225ENST00000483506 SIGLEC9Q9Y336 463 aa14.39□□□□□ -0.11
HDAC6-225ENST00000483506 MGAM2Q2M2H8 2515 aa14.39□□□□□ -0.11
HDAC6-225ENST00000483506 TXNL1O43396 289 aa14.38□□□□□ -0.11
HDAC6-225ENST00000483506 TMEM127O75204 238 aa14.38□□□□□ -0.11
HDAC6-225ENST00000483506 CLEC2LP0C7M8 214 aa14.38□□□□□ -0.11
HDAC6-225ENST00000483506 HIST1H1DP16402 221 aaKnown RBP14.38□□□□□ -0.11
HDAC6-225ENST00000483506 PPP1CCP36873 323 aaKnown RBP14.38□□□□□ -0.11
HDAC6-225ENST00000483506 HLA-DRB3P79483 266 aa14.38□□□□□ -0.11
HDAC6-225ENST00000483506 SRSF4Q08170 494 aaKnown RBP14.38□□□□□ -0.11
HDAC6-225ENST00000483506 EBI3Q14213 229 aa14.38□□□□□ -0.11
HDAC6-225ENST00000483506 PRR31Q5SQ13 230 aa14.38□□□□□ -0.11
HDAC6-225ENST00000483506 IZUMO1Q8IYV9 350 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms