RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 HSPB9Q9BQS6 159 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 MROQ9BYG7 248 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 CHST5Q9GZS9 411 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 COMMD4Q9H0A8 199 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 MAGIXQ9H6Y5 334 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 LINC00574Q9H8X3 128 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 REEP1Q9H902 201 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 GNB4Q9HAV0 340 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 SLC25A19Q9HC21 320 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 HMG20AQ9NP66 347 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 TAS2R3Q9NYW6 316 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 TVP23BQ9NYZ1 205 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 MSRB1Q9NZV6 116 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.53□□□□□ -1.84
CKS1B-207ENST00000477676 ZMAT5Q9UDW3 170 aaKnown RBP3.53□□□□□ -1.84
CKS1B-207ENST00000477676 IKZF2Q9UKS7 526 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 PSG11Q9UQ72 335 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 ZNF256Q9Y2P7 627 aaPredicted RBP3.53□□□□□ -1.84
CKS1B-207ENST00000477676 GSTK1Q9Y2Q3 226 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 HSPG2P98160 4391 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 TRGV10A0A0A0MS01 117 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 TRAV24A0A0B4J272 114 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 RPS10-NUDT3A0A1W2PQS6 291 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 OOSP1A8MZH6 123 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 NPIPB11E5RHQ5 1161 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 I3L521 148 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 J3QR06 171 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 SLC33A1O00400 549 aaPredicted RBP3.52□□□□□ -1.85
CKS1B-207ENST00000477676 CCRL2O00421 344 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 MITFO75030 526 aaPredicted RBP3.52□□□□□ -1.85
CKS1B-207ENST00000477676 RPP14O95059 124 aaKnown RBP3.52□□□□□ -1.85
CKS1B-207ENST00000477676 IGKV1D-33P01593 117 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 IGKV1-33P01594 117 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 IGKV3-20P01619 116 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 IGHG4P01861 327 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 HMGN1P05114 100 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 CSN2P05814 226 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 FRMD6-AS1P0C7T7 363 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 SPNP16150 400 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 TMEM11P17152 192 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 NFYBP25208 207 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 PSMB8P28062 276 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 SLC6A1P30531 599 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 VHLP40337 213 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 PTGFRP43088 359 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 GPR12P47775 334 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 REG1BP48304 166 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 POU3F4P49335 361 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 DAPP51397 102 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 FUT6P51993 359 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 F2RL1P55085 397 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 ISL1P61371 349 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 GNB1P62873 340 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 PDZK1IP1Q13113 114 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 GPR50Q13585 617 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 ATXN7L3Q14CW9 347 aaPredicted RBP3.52□□□□□ -1.85
CKS1B-207ENST00000477676 PNLIPRP3Q17RR3 467 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 GFI1BQ5VTD9 330 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 AADACL4Q5VUY2 407 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 SLX4IPQ5VYV7 408 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 OR52W1Q6IF63 320 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 SLC35E3Q7Z769 313 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 PIGWQ7Z7B1 504 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 SLC35F2Q8IXU6 374 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 TMEM104Q8NE00 496 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 Q8NFD4 153 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 OR51T1Q8NGJ9 327 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 OR5M8Q8NGP6 311 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 RFESDQ8TAC1 157 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 PLPPR1Q8TBJ4 325 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 ASB17Q8WXJ9 295 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 TOMM40LQ969M1 308 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 RNFT2Q96EX2 444 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 CNN2Q99439 309 aaKnown RBP3.52□□□□□ -1.85
CKS1B-207ENST00000477676 TBX5Q99593 518 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 TM2D3Q9BRN9 247 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 OSBPL10Q9BXB5 764 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 TEX12Q9BXU0 123 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 ABCG5Q9H222 651 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 BLOC1S6Q9UL45 172 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 SMAD5-AS1Q9Y6J3 95 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 ABCA13Q86UQ4 5058 aa3.52□□□□□ -1.85
CKS1B-207ENST00000477676 IGHV1-3A0A0C4DH29 117 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 KBTBD11-OT1A0A1B0GTJ5 212 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 LOC107986453A0A1B0GWG9 222 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 A0A1W2PQL4 384 aaPredicted RBP3.51□□□□□ -1.85
CKS1B-207ENST00000477676 MAGEA13PA6NCF6 341 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 FAM90A7PA6NKC0 464 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 ZNF729A6NN14 1252 aaPredicted RBP3.51□□□□□ -1.85
CKS1B-207ENST00000477676 FAM90A23PA8MXZ1 464 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 TOR1AO14656 332 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 RRHO14718 337 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 SLC31A2O15432 143 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 SYT7O43581 403 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 KDM4BO94953 1096 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 CST1P01037 141 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 FAM106CPP0CH98 169 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 ATF1P18846 271 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 HTR1FP30939 366 aa3.51□□□□□ -1.85
CKS1B-207ENST00000477676 SSTR5P35346 364 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms