RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 FBLN7Q53RD9 439 aa7.83□□□□□ -1.16
HDAC3-208ENST00000476739 PLAC9Q5JTB6 97 aa7.83□□□□□ -1.16
HDAC3-208ENST00000476739 OR52W1Q6IF63 320 aa7.83□□□□□ -1.16
HDAC3-208ENST00000476739 OR1L1Q8NH94 360 aa7.83□□□□□ -1.16
HDAC3-208ENST00000476739 SPATA3Q8NHX4 192 aa7.83□□□□□ -1.16
HDAC3-208ENST00000476739 ARL11Q969Q4 196 aa7.83□□□□□ -1.16
HDAC3-208ENST00000476739 ARHGAP5-AS1Q96IT6 56 aa7.83□□□□□ -1.16
HDAC3-208ENST00000476739 KCTD7Q96MP8 289 aa7.83□□□□□ -1.16
HDAC3-208ENST00000476739 HDHD3Q9BSH5 251 aaPredicted RBP7.83□□□□□ -1.16
HDAC3-208ENST00000476739 DPAGT1Q9H3H5 408 aa7.83□□□□□ -1.16
HDAC3-208ENST00000476739 ZMAT3Q9HA38 289 aaKnown RBP7.83□□□□□ -1.16
HDAC3-208ENST00000476739 AK3Q9UIJ7 227 aa7.83□□□□□ -1.16
HDAC3-208ENST00000476739 TRAPPC2LQ9UL33 140 aa7.83□□□□□ -1.16
HDAC3-208ENST00000476739 PSG11Q9UQ72 335 aa7.83□□□□□ -1.16
HDAC3-208ENST00000476739 TBL2Q9Y4P3 447 aaKnown RBP7.83□□□□□ -1.16
HDAC3-208ENST00000476739 LY6LH3BQJ8 138 aa7.82□□□□□ -1.16
HDAC3-208ENST00000476739 BUB1B-PAK6H3BSN5 160 aa7.82□□□□□ -1.16
HDAC3-208ENST00000476739 J3QR06 171 aa7.82□□□□□ -1.16
HDAC3-208ENST00000476739 SHOXO15266 292 aa7.82□□□□□ -1.16
HDAC3-208ENST00000476739 ORC5O43913 435 aa7.82□□□□□ -1.16
HDAC3-208ENST00000476739 APOA1P02647 267 aa7.82□□□□□ -1.16
HDAC3-208ENST00000476739 SNRPBP14678 240 aaKnown RBP7.82□□□□□ -1.16
HDAC3-208ENST00000476739 HTR1DP28221 377 aa7.82□□□□□ -1.16
HDAC3-208ENST00000476739 GNG10P50151 68 aa7.82□□□□□ -1.16
HDAC3-208ENST00000476739 LOXL3P58215 753 aa7.82□□□□□ -1.16
HDAC3-208ENST00000476739 DEFA1P59665 94 aa7.82□□□□□ -1.16
HDAC3-208ENST00000476739 DEFA3P59666 94 aa7.82□□□□□ -1.16
HDAC3-208ENST00000476739 DIAPH2-AS1Q14236 149 aa7.82□□□□□ -1.16
HDAC3-208ENST00000476739 FAM189A2Q15884 450 aa7.82□□□□□ -1.16
HDAC3-208ENST00000476739 HLA-DRB5Q30154 266 aa7.82□□□□□ -1.16
HDAC3-208ENST00000476739 SFXN4Q6P4A7 337 aa7.82□□□□□ -1.16
HDAC3-208ENST00000476739 CCBE1Q6UXH8 406 aaPredicted RBP7.82□□□□□ -1.16
HDAC3-208ENST00000476739 TPRA1Q86W33 373 aa7.82□□□□□ -1.16
HDAC3-208ENST00000476739 PRR18Q8N4B5 295 aa7.82□□□□□ -1.16
HDAC3-208ENST00000476739 OR13F1Q8NGS4 319 aa7.82□□□□□ -1.16
HDAC3-208ENST00000476739 OR9G1Q8NH87 305 aa7.82□□□□□ -1.16
HDAC3-208ENST00000476739 NDNFQ8TB73 568 aa7.82□□□□□ -1.16
HDAC3-208ENST00000476739 CAPSLQ8WWF8 208 aa7.82□□□□□ -1.16
HDAC3-208ENST00000476739 GCDHQ92947 438 aaPredicted RBP7.82□□□□□ -1.16
HDAC3-208ENST00000476739 MALSU1Q96EH3 234 aa7.82□□□□□ -1.16
HDAC3-208ENST00000476739 DCUN1D5Q9BTE7 237 aa7.82□□□□□ -1.16
HDAC3-208ENST00000476739 URM1Q9BTM9 101 aaKnown RBP7.82□□□□□ -1.16
HDAC3-208ENST00000476739 PECRQ9BY49 303 aa7.82□□□□□ -1.16
HDAC3-208ENST00000476739 MBNL3Q9NUK0 354 aaKnown RBP7.82□□□□□ -1.16
HDAC3-208ENST00000476739 PLEKHJ1Q9NW61 149 aa7.82□□□□□ -1.16
HDAC3-208ENST00000476739 C1RLQ9NZP8 487 aa7.82□□□□□ -1.16
HDAC3-208ENST00000476739 VPREB3Q9UKI3 123 aa7.82□□□□□ -1.16
HDAC3-208ENST00000476739 RAB22AQ9UL26 194 aa7.82□□□□□ -1.16
HDAC3-208ENST00000476739 KCNK7Q9Y2U2 307 aa7.82□□□□□ -1.16
HDAC3-208ENST00000476739 CENPXA8MT69 81 aa7.81□□□□□ -1.16
HDAC3-208ENST00000476739 RAB27BO00194 218 aa7.81□□□□□ -1.16
HDAC3-208ENST00000476739 F2RL2O00254 374 aa7.81□□□□□ -1.16
HDAC3-208ENST00000476739 SDCBPO00560 298 aaPredicted RBP7.81□□□□□ -1.16
HDAC3-208ENST00000476739 TOR1AO14656 332 aa7.81□□□□□ -1.16
HDAC3-208ENST00000476739 SLC31A2O15432 143 aa7.81□□□□□ -1.16
HDAC3-208ENST00000476739 CHST1O43916 411 aa7.81□□□□□ -1.16
HDAC3-208ENST00000476739 AIREO43918 545 aa7.81□□□□□ -1.16
HDAC3-208ENST00000476739 CA11O75493 328 aa7.81□□□□□ -1.16
HDAC3-208ENST00000476739 NAPSAO96009 420 aa7.81□□□□□ -1.16
HDAC3-208ENST00000476739 HBZP02008 142 aa7.81□□□□□ -1.16
HDAC3-208ENST00000476739 CD24P25063 80 aa7.81□□□□□ -1.16
HDAC3-208ENST00000476739 COMPP49747 757 aaPredicted RBP7.81□□□□□ -1.16
HDAC3-208ENST00000476739 ZNF134P52741 427 aa7.81□□□□□ -1.16
HDAC3-208ENST00000476739 PPP5CP53041 499 aa7.81□□□□□ -1.16
HDAC3-208ENST00000476739 AWAT1Q58HT5 328 aa7.81□□□□□ -1.16
HDAC3-208ENST00000476739 MINOS1Q5TGZ0 78 aa7.81□□□□□ -1.16
HDAC3-208ENST00000476739 GPR107Q5VW38 600 aa7.81□□□□□ -1.16
HDAC3-208ENST00000476739 Q6ZTK2 550 aa7.81□□□□□ -1.16
HDAC3-208ENST00000476739 OR10A7Q8NGE5 316 aa7.81□□□□□ -1.16
HDAC3-208ENST00000476739 OR10V1Q8NGI7 309 aa7.81□□□□□ -1.16
HDAC3-208ENST00000476739 OR5H6Q8NGV6 325 aa7.81□□□□□ -1.16
HDAC3-208ENST00000476739 ZNF596Q8TC21 504 aa7.81□□□□□ -1.16
HDAC3-208ENST00000476739 LGALS14Q8TCE9 139 aa7.81□□□□□ -1.16
HDAC3-208ENST00000476739 FUNDC2Q9BWH2 189 aa7.81□□□□□ -1.16
HDAC3-208ENST00000476739 NAA50Q9GZZ1 169 aaKnown RBP7.81□□□□□ -1.16
HDAC3-208ENST00000476739 MMP28Q9H239 520 aa7.81□□□□□ -1.16
HDAC3-208ENST00000476739 TAF9BQ9HBM6 251 aa7.81□□□□□ -1.16
HDAC3-208ENST00000476739 GFOD1Q9NXC2 390 aa7.81□□□□□ -1.16
HDAC3-208ENST00000476739 DPM3Q9P2X0 92 aa7.81□□□□□ -1.16
HDAC3-208ENST00000476739 ZNF221Q9UK13 617 aa7.81□□□□□ -1.16
HDAC3-208ENST00000476739 ELF5Q9UKW6 265 aaPredicted RBP7.81□□□□□ -1.16
HDAC3-208ENST00000476739 HSF4Q9ULV5 492 aa7.81□□□□□ -1.16
HDAC3-208ENST00000476739 MINOS1-NBL1R4GNA1 71 aa7.81□□□□□ -1.16
HDAC3-208ENST00000476739 A3GALT2U3KPV4 340 aa7.81□□□□□ -1.16
HDAC3-208ENST00000476739 A0A075B6Q4 140 aa7.8□□□□□ -1.16
HDAC3-208ENST00000476739 LEUTXA8MZ59 168 aa7.8□□□□□ -1.16
HDAC3-208ENST00000476739 H3BUI4 141 aa7.8□□□□□ -1.16
HDAC3-208ENST00000476739 GNB3P16520 340 aa7.8□□□□□ -1.16
HDAC3-208ENST00000476739 RAB6AP20340 208 aa7.8□□□□□ -1.16
HDAC3-208ENST00000476739 MDKP21741 143 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-208ENST00000476739 RPS19P39019 145 aaKnown RBP7.8□□□□□ -1.16
HDAC3-208ENST00000476739 PRRX1P54821 245 aa7.8□□□□□ -1.16
HDAC3-208ENST00000476739 NCS1P62166 190 aa7.8□□□□□ -1.16
HDAC3-208ENST00000476739 GNMTQ14749 295 aa7.8□□□□□ -1.16
HDAC3-208ENST00000476739 AANATQ16613 207 aa7.8□□□□□ -1.16
HDAC3-208ENST00000476739 IDNKQ5T6J7 187 aa7.8□□□□□ -1.16
HDAC3-208ENST00000476739 TPTE2P1Q5T6R2 138 aa7.8□□□□□ -1.16
HDAC3-208ENST00000476739 ZNF880Q6PDB4 577 aa7.8□□□□□ -1.16
HDAC3-208ENST00000476739 C12orf54Q6X4T0 127 aa7.8□□□□□ -1.16
HDAC3-208ENST00000476739 GDPGP1Q6ZNW5 385 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms