RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 NOXO1Q8NFA2 376 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 OR6K3Q8NGY3 331 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 OR10J6PQ8NGY7 276 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 OR2T29Q8NH02 315 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 FNDC9Q8TBE3 224 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 BAALCQ8WXS3 180 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 RPEQ96AT9 228 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 EXOSC8Q96B26 276 aaKnown RBP1.63□□□□□ -2.15
CALD1-216ENST00000473714 HAUS1Q96CS2 278 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 SGTBQ96EQ0 304 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 DUS3LQ96G46 650 aaKnown RBP1.63□□□□□ -2.15
CALD1-216ENST00000473714 Q96MT0 163 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 ZNF317Q96PQ6 595 aaPredicted RBP1.63□□□□□ -2.15
CALD1-216ENST00000473714 OR2M2Q96R28 347 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 PITX2Q99697 317 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 CIB1Q99828 191 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 DOHHQ9BU89 302 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 YTHDF1Q9BYJ9 559 aaKnown RBP1.63□□□□□ -2.15
CALD1-216ENST00000473714 POTEKPQ9BYX7 375 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 FRMD8P1Q9BZ68 369 aaPredicted RBP1.63□□□□□ -2.15
CALD1-216ENST00000473714 SPNS1Q9H2V7 528 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 IFI27L2Q9H2X8 130 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 RNF122Q9H9V4 155 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 ISYNA1Q9NPH2 558 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 MED4Q9NPJ6 270 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 ZNF229Q9UJW7 825 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 SIGLEC9Q9Y336 463 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 RBMX2Q9Y388 322 aaKnown RBP1.63□□□□□ -2.15
CALD1-216ENST00000473714 IGLV11-55A0A075B6I3 123 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 A0A0U1RQV1 116 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 A6NDN8 102 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 ZNF860A6NHJ4 632 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 C16orf90A8MZG2 172 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 INS-IGF2F8WCM5 200 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 RNASEK-C17orf49H0YIS7 233 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 H7C1H1 209 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 PRMT5O14744 637 aaPredicted RBP1.62□□□□□ -2.15
CALD1-216ENST00000473714 SLC16A7O60669 478 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 SPAG7O75391 227 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 AQP8O94778 261 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 NSA2O95478 260 aaKnown RBP1.62□□□□□ -2.15
CALD1-216ENST00000473714 GLAP06280 429 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 GIG44P09565 113 aaPredicted RBP1.62□□□□□ -2.15
CALD1-216ENST00000473714 CD3GP09693 182 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 CD28P10747 220 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 ZNF708P17019 499 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 IL1RNP18510 177 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 DTYMKP23919 212 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 COL8A2P25067 703 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 CNTFRP26992 372 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 HSPA9P38646 679 aaKnown RBP1.62□□□□□ -2.15
CALD1-216ENST00000473714 CXCL5P42830 114 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 GPR4P46093 362 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 WNT4P56705 351 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 TMEM33P57088 247 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 DSCR10P59022 87 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 VSNL1P62760 191 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 C2orf54Q08AI8 447 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 STX4Q12846 297 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 PSG5Q15238 335 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 ZNF239Q16600 458 aaKnown RBP1.62□□□□□ -2.15
CALD1-216ENST00000473714 NDUFAF6Q330K2 333 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 ZNF658BQ4V348 819 aaPredicted RBP1.62□□□□□ -2.15
CALD1-216ENST00000473714 OPN5Q6U736 354 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 ZNF584Q8IVC4 421 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 NKAIN4Q8IVV8 208 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 RIBC1Q8N443 379 aaPredicted RBP1.62□□□□□ -2.15
CALD1-216ENST00000473714 NPWQ8N729 165 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 COX18Q8N8Q8 333 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 GATSQ8NAP1 163 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 OR51A7Q8NH64 312 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 ZIM3Q96PE6 472 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 OR2A5Q96R48 311 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 TIMM17AQ99595 171 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 TSNAXQ99598 290 aaKnown RBP1.62□□□□□ -2.15
CALD1-216ENST00000473714 HSD17B10Q99714 261 aaKnown RBP1.62□□□□□ -2.15
CALD1-216ENST00000473714 ULBP2Q9BZM5 246 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 SLIRPQ9GZT3 109 aaKnown RBP1.62□□□□□ -2.15
CALD1-216ENST00000473714 SYT4Q9H2B2 425 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 GOLPH3Q9H4A6 298 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 REEP1Q9H902 201 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 TMEM27Q9HBJ8 222 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 MMP26Q9NRE1 261 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 SDHAF2Q9NX18 166 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 MTFP1Q9UDX5 166 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 CD300AQ9UGN4 299 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 CES1P1Q9UKY3 287 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 C15orf41Q9Y2V0 281 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 F11RQ9Y624 299 aaKnown RBP1.62□□□□□ -2.15
CALD1-216ENST00000473714 GMEB1Q9Y692 573 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 CHCHD2Q9Y6H1 151 aaPredicted RBP1.62□□□□□ -2.15
CALD1-216ENST00000473714 AGRNO00468 2067 aa1.62□□□□□ -2.15
CALD1-216ENST00000473714 TRAV8-7A0A075B6U6 113 aa1.61□□□□□ -2.15
CALD1-216ENST00000473714 UQCRHLA0A096LP55 91 aa1.61□□□□□ -2.15
CALD1-216ENST00000473714 IGKV3D-11A0A0A0MRZ8 115 aa1.61□□□□□ -2.15
CALD1-216ENST00000473714 TRAV40A0A0B4J280 105 aa1.61□□□□□ -2.15
CALD1-216ENST00000473714 ISPDA4D126 451 aa1.61□□□□□ -2.15
CALD1-216ENST00000473714 TVP23AA6NH52 213 aa1.61□□□□□ -2.15
CALD1-216ENST00000473714 TRPC5OSA6NMA1 111 aa1.61□□□□□ -2.15
CALD1-216ENST00000473714 NCBP2LA6PVI3 153 aaKnown RBP1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms