RNA–Protein interactions for RNA: ENST00000473258.1

COL6A3-210, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 5,433 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-210ENST00000473258 EGLN1Q9GZT9 426 aa7.87□□□□□ -1.15
COL6A3-210ENST00000473258 C19orf53Q9UNZ5 99 aaPredicted RBP7.87□□□□□ -1.15
COL6A3-210ENST00000473258 ENTPD2Q9Y5L3 495 aa7.87□□□□□ -1.15
COL6A3-210ENST00000473258 NWD1Q149M9 1564 aa7.87□□□□□ -1.15
COL6A3-210ENST00000473258 CEP152O94986 1710 aa7.87□□□□□ -1.15
COL6A3-210ENST00000473258 GDF1P27539 372 aa7.87□□□□□ -1.15
COL6A3-210ENST00000473258 TMEM207Q6UWW9 146 aa7.87□□□□□ -1.15
COL6A3-210ENST00000473258 NXT2Q9NPJ8 142 aaKnown RBP7.87□□□□□ -1.15
COL6A3-210ENST00000473258 ANKRD10Q9NXR5 420 aa7.87□□□□□ -1.15
COL6A3-210ENST00000473258 LRP12Q9Y561 859 aa7.87□□□□□ -1.15
COL6A3-210ENST00000473258 MUC21A0A0G2JKD1 596 aa7.87□□□□□ -1.15
COL6A3-210ENST00000473258 MUC21A0A140T8X8 626 aa7.87□□□□□ -1.15
COL6A3-210ENST00000473258 DLL1O00548 723 aa7.87□□□□□ -1.15
COL6A3-210ENST00000473258 RBP4P02753 201 aa7.87□□□□□ -1.15
COL6A3-210ENST00000473258 MGPP08493 103 aa7.87□□□□□ -1.15
COL6A3-210ENST00000473258 MUC21Q5SSG8 566 aa7.87□□□□□ -1.15
COL6A3-210ENST00000473258 SVIPQ8NHG7 77 aa7.87□□□□□ -1.15
COL6A3-210ENST00000473258 ABHD17AQ96GS6 310 aa7.87□□□□□ -1.15
COL6A3-210ENST00000473258 ABHD14BQ96IU4 210 aa7.87□□□□□ -1.15
COL6A3-210ENST00000473258 RABAC1Q9UI14 185 aa7.87□□□□□ -1.15
COL6A3-210ENST00000473258 B9D1Q9UPM9 204 aa7.87□□□□□ -1.15
COL6A3-210ENST00000473258 SPATA31A1Q5TZJ5 1347 aa7.87□□□□□ -1.15
COL6A3-210ENST00000473258 ATXN8Q156A1 80 aa7.87□□□□□ -1.15
COL6A3-210ENST00000473258 SPANXN1Q5VSR9 72 aa7.87□□□□□ -1.15
COL6A3-210ENST00000473258 SHISA6Q6ZSJ9 500 aa7.87□□□□□ -1.15
COL6A3-210ENST00000473258 ARHGEF5Q12774 1597 aa7.87□□□□□ -1.15
COL6A3-210ENST00000473258 MYH4Q9Y623 1939 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 SPRY1O43609 319 aaPredicted RBP7.86□□□□□ -1.15
COL6A3-210ENST00000473258 PDCD6O75340 191 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 EVI2AP22794 236 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 SLC25A1P53007 311 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 KIR3DS1Q14943 382 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 KIR2DS3Q14952 304 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 TEPPQ6URK8 271 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 C1orf122Q6ZSJ8 110 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 LINC00116Q8NCU8 138 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 WBP2Q969T9 261 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 FOXD3Q9UJU5 478 aaPredicted RBP7.86□□□□□ -1.15
COL6A3-210ENST00000473258 IQGAP3Q86VI3 1631 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 CACNA1DQ01668 2161 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 ASPDHA6ND91 283 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 THY1P04216 161 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 ZNF121P58317 390 aaPredicted RBP7.86□□□□□ -1.15
COL6A3-210ENST00000473258 ZP1P60852 638 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 HOXA4Q00056 320 aaPredicted RBP7.86□□□□□ -1.15
COL6A3-210ENST00000473258 CEACAM21Q3KPI0 293 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 DUSP28Q4G0W2 176 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 SPINK9Q5DT21 86 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 FBXW9Q5XUX1 488 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 SLC23A3Q6PIS1 610 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 MRPL55Q7Z7F7 128 aaKnown RBP7.86□□□□□ -1.15
COL6A3-210ENST00000473258 ZNF519Q8TB69 540 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 WFDC12Q8WWY7 111 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 SH3BGRL3Q9H299 93 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 CACNA1FO60840 1977 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 CTSVO60911 334 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 FCGR3BO75015 233 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 PVRP15151 417 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 COL9A2Q14055 689 aaPredicted RBP7.86□□□□□ -1.15
COL6A3-210ENST00000473258 RTP5Q14D33 572 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 DEFB110Q30KQ9 67 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 MED25Q71SY5 747 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 SCCPDHQ8NBX0 429 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 FGF14Q92915 247 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 TMEM126AQ9H061 195 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 TBC1D29Q9UFV1 150 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 ADGRB3O60242 1522 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 PSMB11A5LHX3 300 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 HOXC4P09017 264 aaPredicted RBP7.86□□□□□ -1.15
COL6A3-210ENST00000473258 CA7P43166 264 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 TMEM50BP56557 158 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 ZNF740Q8NDX6 193 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 GPBAR1Q8TDU6 330 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 TAF15Q92804 592 aaKnown RBP eCLIP7.86□□□□□ -1.15
COL6A3-210ENST00000473258 INSM2Q96T92 566 aaPredicted RBP7.86□□□□□ -1.15
COL6A3-210ENST00000473258 EMC6Q9BV81 110 aa7.86□□□□□ -1.15
COL6A3-210ENST00000473258 GLIS2Q9BZE0 524 aaPredicted RBP7.86□□□□□ -1.15
COL6A3-210ENST00000473258 UBE2ZQ9H832 354 aaPredicted RBP7.86□□□□□ -1.15
COL6A3-210ENST00000473258 A0A1W2PRU2 124 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 DHHO43323 396 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 PEX11BO96011 259 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 ACRP10323 421 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 ADMP35318 185 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 CEACAM3P40198 252 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 CLDN10P78369 228 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 C17orf67Q0P5P2 114 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.85□□□□□ -1.15
COL6A3-210ENST00000473258 SYT8Q8NBV8 401 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 OR4C3Q8NH37 302 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 MRIQ9BWK5 157 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 SLC25A2Q9BXI2 301 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 CLEC1BQ9P126 229 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 PDE4DIPQ5VU43 2346 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 TNS2Q63HR2 1409 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 APOHP02749 345 aaPredicted RBP7.85□□□□□ -1.15
COL6A3-210ENST00000473258 PSG9Q00887 426 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 TBC1D28Q2M2D7 210 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 SLC25A30Q5SVS4 291 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.85□□□□□ -1.15
COL6A3-210ENST00000473258 RTN4RQ9BZR6 473 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms