RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 IGHV3-43A0A0B4J1X8 118 aa12.32□□□□□ -0.44
SDC3-203ENST00000471567 MFNGO00587 321 aa12.32□□□□□ -0.44
SDC3-203ENST00000471567 TFAP2AP05549 437 aa12.32□□□□□ -0.44
SDC3-203ENST00000471567 CD3GP09693 182 aa12.32□□□□□ -0.44
SDC3-203ENST00000471567 IGHV3-43DP0DP04 118 aa12.32□□□□□ -0.44
SDC3-203ENST00000471567 HIST1H1DP16402 221 aaKnown RBP12.32□□□□□ -0.44
SDC3-203ENST00000471567 BRS3P32247 399 aa12.32□□□□□ -0.44
SDC3-203ENST00000471567 TGFBR1P36897 503 aa12.32□□□□□ -0.44
SDC3-203ENST00000471567 MRPS15P82914 257 aaKnown RBP12.32□□□□□ -0.44
SDC3-203ENST00000471567 PLA1AQ53H76 456 aa12.32□□□□□ -0.44
SDC3-203ENST00000471567 LY6G6FQ5SQ64 297 aa12.32□□□□□ -0.44
SDC3-203ENST00000471567 C12orf54Q6X4T0 127 aa12.32□□□□□ -0.44
SDC3-203ENST00000471567 Q6ZPA2 131 aa12.32□□□□□ -0.44
SDC3-203ENST00000471567 OR10X1Q8NGY0 326 aa12.32□□□□□ -0.44
SDC3-203ENST00000471567 SETD6Q8TBK2 473 aa12.32□□□□□ -0.44
SDC3-203ENST00000471567 RPEQ96AT9 228 aa12.32□□□□□ -0.44
SDC3-203ENST00000471567 HDHD3Q9BSH5 251 aaPredicted RBP12.32□□□□□ -0.44
SDC3-203ENST00000471567 Q9N2K0 584 aa12.32□□□□□ -0.44
SDC3-203ENST00000471567 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.32□□□□□ -0.44
SDC3-203ENST00000471567 PITPNC1Q9UKF7 332 aa12.32□□□□□ -0.44
SDC3-203ENST00000471567 TCF19Q9Y242 345 aa12.32□□□□□ -0.44
SDC3-203ENST00000471567 A0A1B0GUS0 222 aa12.31□□□□□ -0.44
SDC3-203ENST00000471567 YPEL1O60688 119 aa12.31□□□□□ -0.44
SDC3-203ENST00000471567 RGS11O94810 467 aa12.31□□□□□ -0.44
SDC3-203ENST00000471567 GNB3P16520 340 aa12.31□□□□□ -0.44
SDC3-203ENST00000471567 IL3RAP26951 378 aa12.31□□□□□ -0.44
SDC3-203ENST00000471567 MNDAP41218 407 aa12.31□□□□□ -0.44
SDC3-203ENST00000471567 RAB7AP51149 207 aa12.31□□□□□ -0.44
SDC3-203ENST00000471567 RAB13P51153 203 aa12.31□□□□□ -0.44
SDC3-203ENST00000471567 LY6EQ16553 131 aa12.31□□□□□ -0.44
SDC3-203ENST00000471567 MORN2Q502X0 79 aa12.31□□□□□ -0.44
SDC3-203ENST00000471567 AWAT1Q58HT5 328 aa12.31□□□□□ -0.44
SDC3-203ENST00000471567 OLFML2AQ68BL7 652 aa12.31□□□□□ -0.44
SDC3-203ENST00000471567 DHRS7BQ6IAN0 325 aaPredicted RBP12.31□□□□□ -0.44
SDC3-203ENST00000471567 SLC25A48Q6ZT89 311 aaKnown RBP12.31□□□□□ -0.44
SDC3-203ENST00000471567 GPR141Q7Z602 305 aa12.31□□□□□ -0.44
SDC3-203ENST00000471567 ZNF439Q8NDP4 499 aa12.31□□□□□ -0.44
SDC3-203ENST00000471567 OR4F5Q8NH21 305 aa12.31□□□□□ -0.44
SDC3-203ENST00000471567 TOMM40LQ969M1 308 aa12.31□□□□□ -0.44
SDC3-203ENST00000471567 YPEL2Q96QA6 119 aa12.31□□□□□ -0.44
SDC3-203ENST00000471567 RHBDL2Q9NX52 303 aa12.31□□□□□ -0.44
SDC3-203ENST00000471567 SPATA2Q9UM82 520 aa12.31□□□□□ -0.44
SDC3-203ENST00000471567 MMP24Q9Y5R2 645 aa12.31□□□□□ -0.44
SDC3-203ENST00000471567 A0A0A6YYH2 397 aa12.3□□□□□ -0.44
SDC3-203ENST00000471567 A0A1W2PPE3 182 aa12.3□□□□□ -0.44
SDC3-203ENST00000471567 A6NDX4 124 aa12.3□□□□□ -0.44
SDC3-203ENST00000471567 A6NJ64 397 aa12.3□□□□□ -0.44
SDC3-203ENST00000471567 GABARAPO95166 117 aa12.3□□□□□ -0.44
SDC3-203ENST00000471567 SERPINB10P48595 397 aa12.3□□□□□ -0.44
SDC3-203ENST00000471567 RAG2P55895 527 aa12.3□□□□□ -0.44
SDC3-203ENST00000471567 VBP1P61758 197 aa12.3□□□□□ -0.44
SDC3-203ENST00000471567 NCS1P62166 190 aa12.3□□□□□ -0.44
SDC3-203ENST00000471567 HLA-DRB3P79483 266 aa12.3□□□□□ -0.44
SDC3-203ENST00000471567 RELBQ01201 579 aa12.3□□□□□ -0.44
SDC3-203ENST00000471567 ZNF816Q0VGE8 651 aaPredicted RBP12.3□□□□□ -0.44
SDC3-203ENST00000471567 CDNFQ49AH0 187 aa12.3□□□□□ -0.44
SDC3-203ENST00000471567 CT45A1Q5HYN5 189 aa12.3□□□□□ -0.44
SDC3-203ENST00000471567 FAM53AQ6NSI3 398 aaPredicted RBP12.3□□□□□ -0.44
SDC3-203ENST00000471567 OR8H3Q8N146 312 aa12.3□□□□□ -0.44
SDC3-203ENST00000471567 OR52L2PQ8NGH6 319 aa12.3□□□□□ -0.44
SDC3-203ENST00000471567 OR10V1Q8NGI7 309 aa12.3□□□□□ -0.44
SDC3-203ENST00000471567 OR5H6Q8NGV6 325 aa12.3□□□□□ -0.44
SDC3-203ENST00000471567 CT45A3Q8NHU0 189 aa12.3□□□□□ -0.44
SDC3-203ENST00000471567 SLC25A46Q96AG3 418 aa12.3□□□□□ -0.44
SDC3-203ENST00000471567 KCTD12Q96CX2 325 aaKnown RBP12.3□□□□□ -0.44
SDC3-203ENST00000471567 STAB1Q9NY15 2570 aa12.29□□□□□ -0.44
SDC3-203ENST00000471567 A0A075B6Q4 140 aa12.29□□□□□ -0.44
SDC3-203ENST00000471567 TRDCB7Z8K6 153 aa12.29□□□□□ -0.44
SDC3-203ENST00000471567 TSPAN9O75954 239 aa12.29□□□□□ -0.44
SDC3-203ENST00000471567 GAPDHP04406 335 aaKnown RBP12.29□□□□□ -0.44
SDC3-203ENST00000471567 GSTP1P09211 210 aaKnown RBP12.29□□□□□ -0.44
SDC3-203ENST00000471567 ZNF134P52741 427 aa12.29□□□□□ -0.44
SDC3-203ENST00000471567 ZNF137PP52743 207 aa12.29□□□□□ -0.44
SDC3-203ENST00000471567 ARFRP1Q13795 201 aa12.29□□□□□ -0.44
SDC3-203ENST00000471567 CTF1Q16619 201 aa12.29□□□□□ -0.44
SDC3-203ENST00000471567 SRSF7Q16629 238 aaKnown RBP eCLIP12.29□□□□□ -0.44
SDC3-203ENST00000471567 GPR107Q5VW38 600 aa12.29□□□□□ -0.44
SDC3-203ENST00000471567 C5orf24Q7Z6I8 188 aa12.29□□□□□ -0.44
SDC3-203ENST00000471567 THNSL2Q86YJ6 484 aa12.29□□□□□ -0.44
SDC3-203ENST00000471567 DTX3Q8N9I9 347 aa12.29□□□□□ -0.44
SDC3-203ENST00000471567 IL1F10Q8WWZ1 152 aa12.29□□□□□ -0.44
SDC3-203ENST00000471567 ST6GALNAC6Q969X2 333 aa12.29□□□□□ -0.44
SDC3-203ENST00000471567 PHF21AQ96BD5 680 aa12.29□□□□□ -0.44
SDC3-203ENST00000471567 SLC25A38Q96DW6 304 aa12.29□□□□□ -0.44
SDC3-203ENST00000471567 C16orf95Q9H693 158 aa12.29□□□□□ -0.44
SDC3-203ENST00000471567 BEX1Q9HBH7 125 aa12.29□□□□□ -0.44
SDC3-203ENST00000471567 FAM90A9PA6NNJ1 464 aa12.28□□□□□ -0.44
SDC3-203ENST00000471567 HSD17B6O14756 317 aa12.28□□□□□ -0.44
SDC3-203ENST00000471567 SLC31A2O15432 143 aa12.28□□□□□ -0.44
SDC3-203ENST00000471567 LPLP06858 475 aa12.28□□□□□ -0.44
SDC3-203ENST00000471567 FCGR3AP08637 254 aa12.28□□□□□ -0.44
SDC3-203ENST00000471567 PPP1CCP36873 323 aaKnown RBP12.28□□□□□ -0.44
SDC3-203ENST00000471567 TALDO1P37837 337 aa12.28□□□□□ -0.44
SDC3-203ENST00000471567 KIR2DS4P43632 304 aa12.28□□□□□ -0.44
SDC3-203ENST00000471567 RPL5P46777 297 aaKnown RBP12.28□□□□□ -0.44
SDC3-203ENST00000471567 PITPNAQ00169 270 aa12.28□□□□□ -0.44
SDC3-203ENST00000471567 GNMTQ14749 295 aa12.28□□□□□ -0.44
SDC3-203ENST00000471567 KIR2DS1Q14954 304 aa12.28□□□□□ -0.44
SDC3-203ENST00000471567 PNLIPRP3Q17RR3 467 aa12.28□□□□□ -0.44
SDC3-203ENST00000471567 HACD4Q5VWC8 232 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms