RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 LIPCP11150 499 aa-0.09□□□□□ -2.42
COMMD3-209ENST00000471350 CRHBPP24387 322 aa-0.09□□□□□ -2.42
COMMD3-209ENST00000471350 REG1BP48304 166 aa-0.09□□□□□ -2.42
COMMD3-209ENST00000471350 DNASE1L1P49184 302 aa-0.09□□□□□ -2.42
COMMD3-209ENST00000471350 MP68P56378 58 aa-0.09□□□□□ -2.42
COMMD3-209ENST00000471350 DSTNP60981 165 aa-0.09□□□□□ -2.42
COMMD3-209ENST00000471350 HBG1P69891 147 aa-0.09□□□□□ -2.42
COMMD3-209ENST00000471350 HBG2P69892 147 aa-0.09□□□□□ -2.42
COMMD3-209ENST00000471350 EMX1Q04741 257 aaPredicted RBP-0.09□□□□□ -2.42
COMMD3-209ENST00000471350 OR10K2Q6IF99 312 aa-0.09□□□□□ -2.42
COMMD3-209ENST00000471350 CLEC20AQ6ZU45 233 aa-0.09□□□□□ -2.42
COMMD3-209ENST00000471350 MRPL21Q7Z2W9 205 aaKnown RBP-0.09□□□□□ -2.42
COMMD3-209ENST00000471350 DYNAPQ8N1N2 210 aa-0.09□□□□□ -2.42
COMMD3-209ENST00000471350 ATPAF2Q8N5M1 289 aa-0.09□□□□□ -2.42
COMMD3-209ENST00000471350 COMMD1Q8N668 190 aa-0.09□□□□□ -2.42
COMMD3-209ENST00000471350 ZNF439Q8NDP4 499 aa-0.09□□□□□ -2.42
COMMD3-209ENST00000471350 FNDC9Q8TBE3 224 aa-0.09□□□□□ -2.42
COMMD3-209ENST00000471350 TFGQ92734 400 aaPredicted RBP-0.09□□□□□ -2.42
COMMD3-209ENST00000471350 SUCNR1Q9BXA5 334 aa-0.09□□□□□ -2.42
COMMD3-209ENST00000471350 IQCGQ9H095 443 aaKnown RBP-0.09□□□□□ -2.42
COMMD3-209ENST00000471350 C11orf49Q9H6J7 331 aa-0.09□□□□□ -2.42
COMMD3-209ENST00000471350 AHSPQ9NZD4 102 aa-0.09□□□□□ -2.42
COMMD3-209ENST00000471350 ZMAT5Q9UDW3 170 aaKnown RBP-0.09□□□□□ -2.42
COMMD3-209ENST00000471350 TBL2Q9Y4P3 447 aaKnown RBP-0.09□□□□□ -2.42
COMMD3-209ENST00000471350 FAM215AQ9Y5M1 114 aa-0.09□□□□□ -2.42
COMMD3-209ENST00000471350 TRPM6Q9BX84 2022 aa-0.09□□□□□ -2.42
COMMD3-209ENST00000471350 AQRO60306 1485 aaKnown RBP eCLIP-0.1□□□□□ -2.426e-7■■■■□ 24.7
COMMD3-209ENST00000471350 TRAV8-2A0A0B4J237 113 aa-0.1□□□□□ -2.43
COMMD3-209ENST00000471350 LOC100653049A0A140TA62 436 aa-0.1□□□□□ -2.43
COMMD3-209ENST00000471350 H3BSA7 217 aa-0.1□□□□□ -2.43
COMMD3-209ENST00000471350 PSMD11O00231 422 aa-0.1□□□□□ -2.43
COMMD3-209ENST00000471350 CASQ2O14958 399 aaPredicted RBP-0.1□□□□□ -2.43
COMMD3-209ENST00000471350 KRT34O76011 436 aa-0.1□□□□□ -2.43
COMMD3-209ENST00000471350 ZNF728P0DKX0 622 aa-0.1□□□□□ -2.43
COMMD3-209ENST00000471350 RAB38P57729 211 aa-0.1□□□□□ -2.43
COMMD3-209ENST00000471350 DEFA6Q01524 100 aa-0.1□□□□□ -2.43
COMMD3-209ENST00000471350 DYNC1I2Q13409 638 aaKnown RBP-0.1□□□□□ -2.43
COMMD3-209ENST00000471350 ELOBQ15370 118 aa-0.1□□□□□ -2.43
COMMD3-209ENST00000471350 EBLN2Q6P2I7 272 aa-0.1□□□□□ -2.43
COMMD3-209ENST00000471350 FAM43BQ6ZT52 329 aaPredicted RBP-0.1□□□□□ -2.43
COMMD3-209ENST00000471350 SBSPONQ8IVN8 264 aa-0.1□□□□□ -2.43
COMMD3-209ENST00000471350 PROKR2Q8NFJ6 384 aa-0.1□□□□□ -2.43
COMMD3-209ENST00000471350 OR9I1Q8NGQ6 314 aa-0.1□□□□□ -2.43
COMMD3-209ENST00000471350 TBX5Q99593 518 aa-0.1□□□□□ -2.43
COMMD3-209ENST00000471350 EBPLQ9BY08 206 aa-0.1□□□□□ -2.43
COMMD3-209ENST00000471350 C11orf1Q9H5F2 150 aa-0.1□□□□□ -2.43
COMMD3-209ENST00000471350 EXO5Q9H790 373 aa-0.1□□□□□ -2.43
COMMD3-209ENST00000471350 METTL17Q9H7H0 456 aaPredicted RBP-0.1□□□□□ -2.43
COMMD3-209ENST00000471350 ACOT13Q9NPJ3 140 aa-0.1□□□□□ -2.43
COMMD3-209ENST00000471350 IFNKQ9P0W0 207 aa-0.1□□□□□ -2.43
COMMD3-209ENST00000471350 GLS2Q9UI32 602 aa-0.1□□□□□ -2.43
COMMD3-209ENST00000471350 MACF1Q9UPN3 7388 aaKnown RBP-0.1□□□□□ -2.43
COMMD3-209ENST00000471350 CTAGE15A4D2H0 777 aa-0.11□□□□□ -2.43
COMMD3-209ENST00000471350 TRAPPC13A5PLN9 417 aa-0.11□□□□□ -2.43
COMMD3-209ENST00000471350 FGF4P08620 206 aa-0.11□□□□□ -2.43
COMMD3-209ENST00000471350 SPNP16150 400 aa-0.11□□□□□ -2.43
COMMD3-209ENST00000471350 TSPOP30536 169 aa-0.11□□□□□ -2.43
COMMD3-209ENST00000471350 XCL1P47992 114 aa-0.11□□□□□ -2.43
COMMD3-209ENST00000471350 TSPEAR-AS2P59090 65 aa-0.11□□□□□ -2.43
COMMD3-209ENST00000471350 STX4Q12846 297 aa-0.11□□□□□ -2.43
COMMD3-209ENST00000471350 PDGFRLQ15198 375 aa-0.11□□□□□ -2.43
COMMD3-209ENST00000471350 TAL2Q16559 108 aa-0.11□□□□□ -2.43
COMMD3-209ENST00000471350 RESP18Q5W5W9 173 aa-0.11□□□□□ -2.43
COMMD3-209ENST00000471350 LAMTOR1Q6IAA8 161 aa-0.11□□□□□ -2.43
COMMD3-209ENST00000471350 DGAT2L6Q6ZPD8 337 aa-0.11□□□□□ -2.43
COMMD3-209ENST00000471350 C7orf65Q6ZTY9 151 aa-0.11□□□□□ -2.43
COMMD3-209ENST00000471350 DCXRQ7Z4W1 244 aa-0.11□□□□□ -2.43
COMMD3-209ENST00000471350 KTN1-AS1Q86SY8 53 aa-0.11□□□□□ -2.43
COMMD3-209ENST00000471350 CTAGE6Q86UF2 777 aa-0.11□□□□□ -2.43
COMMD3-209ENST00000471350 SLC13A5Q86YT5 568 aaPredicted RBP-0.11□□□□□ -2.43
COMMD3-209ENST00000471350 KATNAL2Q8IYT4 538 aa-0.11□□□□□ -2.43
COMMD3-209ENST00000471350 Q8N2B8 174 aa-0.11□□□□□ -2.43
COMMD3-209ENST00000471350 SLC7A6Q92536 515 aa-0.11□□□□□ -2.43
COMMD3-209ENST00000471350 CCDC127Q96BQ5 260 aa-0.11□□□□□ -2.43
COMMD3-209ENST00000471350 CERS2Q96G23 380 aa-0.11□□□□□ -2.43
COMMD3-209ENST00000471350 BEX2Q9BXY8 128 aa-0.11□□□□□ -2.43
COMMD3-209ENST00000471350 VCX3BQ9H321 246 aa-0.11□□□□□ -2.43
COMMD3-209ENST00000471350 CACNA1SQ13698 1873 aa-0.12□□□□□ -2.43
COMMD3-209ENST00000471350 NAV3Q8IVL0 2385 aa-0.12□□□□□ -2.43
COMMD3-209ENST00000471350 LINC00862A6NCI5 91 aa-0.12□□□□□ -2.43
COMMD3-209ENST00000471350 OR5K4A6NMS3 321 aa-0.12□□□□□ -2.43
COMMD3-209ENST00000471350 CCDC169A6NNP5 214 aa-0.12□□□□□ -2.43
COMMD3-209ENST00000471350 J3QLI3 93 aa-0.12□□□□□ -2.43
COMMD3-209ENST00000471350 UBDO15205 165 aa-0.12□□□□□ -2.43
COMMD3-209ENST00000471350 CIAO1O76071 339 aa-0.12□□□□□ -2.43
COMMD3-209ENST00000471350 MT-CO2P00403 227 aa-0.12□□□□□ -2.43
COMMD3-209ENST00000471350 CD8AP01732 235 aa-0.12□□□□□ -2.43
COMMD3-209ENST00000471350 SERPINA7P05543 415 aa-0.12□□□□□ -2.43
COMMD3-209ENST00000471350 BPGMP07738 259 aa-0.12□□□□□ -2.43
COMMD3-209ENST00000471350 OR8G3PP0DMU2 310 aa-0.12□□□□□ -2.43
COMMD3-209ENST00000471350 AKR1C4P17516 323 aa-0.12□□□□□ -2.43
COMMD3-209ENST00000471350 NPPCP23582 126 aa-0.12□□□□□ -2.43
COMMD3-209ENST00000471350 CD24P25063 80 aa-0.12□□□□□ -2.43
COMMD3-209ENST00000471350 ALDH3A1P30838 453 aa-0.12□□□□□ -2.43
COMMD3-209ENST00000471350 CD79BP40259 229 aa-0.12□□□□□ -2.43
COMMD3-209ENST00000471350 RPS5P46782 204 aaKnown RBP-0.12□□□□□ -2.43
COMMD3-209ENST00000471350 PAFAH1B3Q15102 231 aaKnown RBP-0.12□□□□□ -2.43
COMMD3-209ENST00000471350 CDK10Q15131 360 aa-0.12□□□□□ -2.43
COMMD3-209ENST00000471350 RAB11BQ15907 218 aa-0.12□□□□□ -2.43
COMMD3-209ENST00000471350 HES3Q5TGS1 186 aa-0.12□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms