RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 GFI1Q99684 422 aa10.92□□□□□ -0.66
HMGN1-211ENST00000471260 PDCD1LG2Q9BQ51 273 aa10.92□□□□□ -0.66
HMGN1-211ENST00000471260 LIN7BQ9HAP6 207 aa10.92□□□□□ -0.66
HMGN1-211ENST00000471260 HSPB11Q9Y547 144 aa10.92□□□□□ -0.66
HMGN1-211ENST00000471260 PKD1L1Q8TDX9 2849 aa10.92□□□□□ -0.66
HMGN1-211ENST00000471260 A0A0A6YYH2 397 aa10.91□□□□□ -0.66
HMGN1-211ENST00000471260 A6NJ64 397 aa10.91□□□□□ -0.66
HMGN1-211ENST00000471260 H3BUI4 141 aa10.91□□□□□ -0.66
HMGN1-211ENST00000471260 FABP7O15540 132 aa10.91□□□□□ -0.66
HMGN1-211ENST00000471260 CSN2P05814 226 aa10.91□□□□□ -0.66
HMGN1-211ENST00000471260 HTR2BP41595 481 aa10.91□□□□□ -0.66
HMGN1-211ENST00000471260 EFNB2P52799 333 aa10.91□□□□□ -0.66
HMGN1-211ENST00000471260 P2RX3P56373 397 aa10.91□□□□□ -0.66
HMGN1-211ENST00000471260 DHODHQ02127 395 aa10.91□□□□□ -0.66
HMGN1-211ENST00000471260 HERPUD1Q15011 391 aa10.91□□□□□ -0.66
HMGN1-211ENST00000471260 Q5BKY6 102 aa10.91□□□□□ -0.66
HMGN1-211ENST00000471260 OR52W1Q6IF63 320 aa10.91□□□□□ -0.66
HMGN1-211ENST00000471260 Q6ZTK2 550 aa10.91□□□□□ -0.66
HMGN1-211ENST00000471260 LRRTM1Q86UE6 522 aa10.91□□□□□ -0.66
HMGN1-211ENST00000471260 RTN4RL2Q86UN3 420 aa10.91□□□□□ -0.66
HMGN1-211ENST00000471260 OR4S1Q8NGB4 309 aa10.91□□□□□ -0.66
HMGN1-211ENST00000471260 OR11H7Q8NGC8 314 aa10.91□□□□□ -0.66
HMGN1-211ENST00000471260 ZNF431Q8TF32 576 aaPredicted RBP10.91□□□□□ -0.66
HMGN1-211ENST00000471260 CORO2AQ92828 525 aa10.91□□□□□ -0.66
HMGN1-211ENST00000471260 CHST6Q9GZX3 395 aa10.91□□□□□ -0.66
HMGN1-211ENST00000471260 GAL3ST2Q9H3Q3 398 aa10.91□□□□□ -0.66
HMGN1-211ENST00000471260 GPN1Q9HCN4 374 aaPredicted RBP10.91□□□□□ -0.66
HMGN1-211ENST00000471260 TAS2R3Q9NYW6 316 aa10.91□□□□□ -0.66
HMGN1-211ENST00000471260 IL36RNQ9UBH0 155 aa10.91□□□□□ -0.66
HMGN1-211ENST00000471260 STEAP1Q9UHE8 339 aa10.91□□□□□ -0.66
HMGN1-211ENST00000471260 ZNF107Q9UII5 783 aaPredicted RBP10.91□□□□□ -0.66
HMGN1-211ENST00000471260 ELF5Q9UKW6 265 aaPredicted RBP10.91□□□□□ -0.66
HMGN1-211ENST00000471260 FOXJ3Q9UPW0 622 aa10.91□□□□□ -0.66
HMGN1-211ENST00000471260 DHDHQ9UQ10 334 aa10.91□□□□□ -0.66
HMGN1-211ENST00000471260 TCF19Q9Y242 345 aa10.91□□□□□ -0.66
HMGN1-211ENST00000471260 TRAV6A0A075B6T7 132 aa10.9□□□□□ -0.66
HMGN1-211ENST00000471260 TRGV10A0A0A0MS01 117 aa10.9□□□□□ -0.66
HMGN1-211ENST00000471260 IGHV2-26A0A0B4J1V2 119 aa10.9□□□□□ -0.66
HMGN1-211ENST00000471260 IGKV1-12A0A0C4DH73 117 aa10.9□□□□□ -0.66
HMGN1-211ENST00000471260 SULT1C2O00338 296 aa10.9□□□□□ -0.66
HMGN1-211ENST00000471260 OR2H2O95918 312 aa10.9□□□□□ -0.66
HMGN1-211ENST00000471260 IGKV1D-12P01611 117 aa10.9□□□□□ -0.66
HMGN1-211ENST00000471260 CSF1P09603 554 aa10.9□□□□□ -0.66
HMGN1-211ENST00000471260 DUSP1P28562 367 aa10.9□□□□□ -0.66
HMGN1-211ENST00000471260 OR3A1P47881 315 aa10.9□□□□□ -0.66
HMGN1-211ENST00000471260 KISS1Q15726 138 aa10.9□□□□□ -0.66
HMGN1-211ENST00000471260 FAM189A2Q15884 450 aa10.9□□□□□ -0.66
HMGN1-211ENST00000471260 SSX2Q16385 188 aa10.9□□□□□ -0.66
HMGN1-211ENST00000471260 C6orf183Q5T699 404 aa10.9□□□□□ -0.66
HMGN1-211ENST00000471260 TPRX1Q8N7U7 411 aa10.9□□□□□ -0.66
HMGN1-211ENST00000471260 CLEC7AQ9BXN2 247 aa10.9□□□□□ -0.66
HMGN1-211ENST00000471260 TMEM133Q9H2Q1 129 aa10.9□□□□□ -0.66
HMGN1-211ENST00000471260 AUNIPQ9H7T9 357 aa10.9□□□□□ -0.66
HMGN1-211ENST00000471260 HRASLSQ9HDD0 168 aa10.9□□□□□ -0.66
HMGN1-211ENST00000471260 BOLA1Q9Y3E2 137 aa10.9□□□□□ -0.66
HMGN1-211ENST00000471260 CMYA5Q8N3K9 4069 aa10.89□□□□□ -0.67
HMGN1-211ENST00000471260 KCNAB3O43448 404 aa10.89□□□□□ -0.67
HMGN1-211ENST00000471260 XRCC3O43542 346 aa10.89□□□□□ -0.67
HMGN1-211ENST00000471260 NDUFB6O95139 128 aa10.89□□□□□ -0.67
HMGN1-211ENST00000471260 IFNA7P01567 189 aa10.89□□□□□ -0.67
HMGN1-211ENST00000471260 HCKP08631 526 aa10.89□□□□□ -0.67
HMGN1-211ENST00000471260 GIPP09681 153 aaPredicted RBP10.89□□□□□ -0.67
HMGN1-211ENST00000471260 ZNF44P15621 663 aa10.89□□□□□ -0.67
HMGN1-211ENST00000471260 TAS2R20P59543 309 aa10.89□□□□□ -0.67
HMGN1-211ENST00000471260 ZP1P60852 638 aa10.89□□□□□ -0.67
HMGN1-211ENST00000471260 DEFA6Q01524 100 aa10.89□□□□□ -0.67
HMGN1-211ENST00000471260 HES5Q5TA89 166 aa10.89□□□□□ -0.67
HMGN1-211ENST00000471260 ELP2Q6IA86 826 aa10.89□□□□□ -0.67
HMGN1-211ENST00000471260 TRAPPC6BQ86SZ2 158 aa10.89□□□□□ -0.67
HMGN1-211ENST00000471260 CDH26Q8IXH8 852 aa10.89□□□□□ -0.67
HMGN1-211ENST00000471260 DYNAPQ8N1N2 210 aa10.89□□□□□ -0.67
HMGN1-211ENST00000471260 Q8N2B8 174 aa10.89□□□□□ -0.67
HMGN1-211ENST00000471260 PXT1Q8NFP0 134 aa10.89□□□□□ -0.67
HMGN1-211ENST00000471260 SNAPC3Q92966 411 aa10.89□□□□□ -0.67
HMGN1-211ENST00000471260 SPACA5Q96QH8 159 aa10.89□□□□□ -0.67
HMGN1-211ENST00000471260 MRPS7Q9Y2R9 242 aaKnown RBP10.89□□□□□ -0.67
HMGN1-211ENST00000471260 MEX3AA1L020 520 aaKnown RBP10.88□□□□□ -0.67
HMGN1-211ENST00000471260 MEGF11A6BM72 1044 aa10.88□□□□□ -0.67
HMGN1-211ENST00000471260 LINC00862A6NCI5 91 aa10.88□□□□□ -0.67
HMGN1-211ENST00000471260 A6NDX4 124 aa10.88□□□□□ -0.67
HMGN1-211ENST00000471260 SIRPB1O00241 398 aa10.88□□□□□ -0.67
HMGN1-211ENST00000471260 SLC17A2O00624 439 aa10.88□□□□□ -0.67
HMGN1-211ENST00000471260 SSNA1O43805 119 aa10.88□□□□□ -0.67
HMGN1-211ENST00000471260 CHST1O43916 411 aa10.88□□□□□ -0.67
HMGN1-211ENST00000471260 CREBL2O60519 120 aaPredicted RBP10.88□□□□□ -0.67
HMGN1-211ENST00000471260 RGS11O94810 467 aa10.88□□□□□ -0.67
HMGN1-211ENST00000471260 MT-ND4P03905 459 aa10.88□□□□□ -0.67
HMGN1-211ENST00000471260 CD2P06729 351 aa10.88□□□□□ -0.67
HMGN1-211ENST00000471260 TMEM225BP0DP42 221 aa10.88□□□□□ -0.67
HMGN1-211ENST00000471260 CD37P11049 281 aa10.88□□□□□ -0.67
HMGN1-211ENST00000471260 RAB3AP20336 220 aa10.88□□□□□ -0.67
HMGN1-211ENST00000471260 PAX6P26367 422 aa10.88□□□□□ -0.67
HMGN1-211ENST00000471260 HTR1DP28221 377 aa10.88□□□□□ -0.67
HMGN1-211ENST00000471260 SNU13P55769 128 aaKnown RBP10.88□□□□□ -0.67
HMGN1-211ENST00000471260 ACTBP60709 375 aa10.88□□□□□ -0.67
HMGN1-211ENST00000471260 RAP2BP61225 183 aa10.88□□□□□ -0.67
HMGN1-211ENST00000471260 RBMS2Q15434 407 aaKnown RBP10.88□□□□□ -0.67
HMGN1-211ENST00000471260 LDLRAD2Q5SZI1 272 aa10.88□□□□□ -0.67
HMGN1-211ENST00000471260 ZNF529Q6P280 563 aa10.88□□□□□ -0.67
HMGN1-211ENST00000471260 Q6P435 159 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms