RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 S1PR3Q99500 378 aa10.86□□□□□ -0.67
SEMA3F-208ENST00000470737 S100A13Q99584 98 aa10.86□□□□□ -0.67
SEMA3F-208ENST00000470737 YTHDF1Q9BYJ9 559 aaKnown RBP10.86□□□□□ -0.67
SEMA3F-208ENST00000470737 Q9H521 79 aa10.86□□□□□ -0.67
SEMA3F-208ENST00000470737 RAB9BQ9NP90 201 aa10.86□□□□□ -0.67
SEMA3F-208ENST00000470737 TMEM138Q9NPI0 162 aa10.86□□□□□ -0.67
SEMA3F-208ENST00000470737 ST3GAL6Q9Y274 331 aa10.86□□□□□ -0.67
SEMA3F-208ENST00000470737 SMAD5-AS1Q9Y6J3 95 aa10.86□□□□□ -0.67
SEMA3F-208ENST00000470737 TXNL1O43396 289 aa10.85□□□□□ -0.67
SEMA3F-208ENST00000470737 IGHG4P01861 327 aa10.85□□□□□ -0.67
SEMA3F-208ENST00000470737 MAPK3P27361 379 aaPredicted RBP10.85□□□□□ -0.67
SEMA3F-208ENST00000470737 SOX2P48431 317 aa10.85□□□□□ -0.67
SEMA3F-208ENST00000470737 TMEM65Q6PI78 240 aa10.85□□□□□ -0.67
SEMA3F-208ENST00000470737 C8orf31Q8N9H6 132 aa10.85□□□□□ -0.67
SEMA3F-208ENST00000470737 MUC7Q8TAX7 377 aa10.85□□□□□ -0.67
SEMA3F-208ENST00000470737 RTN4IP1Q8WWV3 396 aaPredicted RBP10.85□□□□□ -0.67
SEMA3F-208ENST00000470737 METTL9Q9H1A3 318 aa10.85□□□□□ -0.67
SEMA3F-208ENST00000470737 GFOD1Q9NXC2 390 aa10.85□□□□□ -0.67
SEMA3F-208ENST00000470737 CKLFQ9UBR5 152 aa10.85□□□□□ -0.67
SEMA3F-208ENST00000470737 SCOCQ9UIL1 159 aa10.85□□□□□ -0.67
SEMA3F-208ENST00000470737 ING4Q9UNL4 249 aa10.85□□□□□ -0.67
SEMA3F-208ENST00000470737 HUWE1Q7Z6Z7 4374 aaKnown RBP10.84□□□□□ -0.67
SEMA3F-208ENST00000470737 IGHV3-43A0A0B4J1X8 118 aa10.84□□□□□ -0.67
SEMA3F-208ENST00000470737 OR8U8P0C7N1 319 aa10.84□□□□□ -0.67
SEMA3F-208ENST00000470737 IGHV3-43DP0DP04 118 aa10.84□□□□□ -0.67
SEMA3F-208ENST00000470737 BDKRB2P30411 391 aa10.84□□□□□ -0.67
SEMA3F-208ENST00000470737 GABARAPL2P60520 117 aa10.84□□□□□ -0.67
SEMA3F-208ENST00000470737 PPP3R1P63098 170 aa10.84□□□□□ -0.67
SEMA3F-208ENST00000470737 TPBGQ13641 420 aa10.84□□□□□ -0.67
SEMA3F-208ENST00000470737 FHL3Q13643 280 aa10.84□□□□□ -0.67
SEMA3F-208ENST00000470737 DOC2BQ14184 412 aa10.84□□□□□ -0.67
SEMA3F-208ENST00000470737 TRAM1Q15629 374 aa10.84□□□□□ -0.67
SEMA3F-208ENST00000470737 Q3ZCU0 254 aa10.84□□□□□ -0.67
SEMA3F-208ENST00000470737 ATAD3CQ5T2N8 411 aa10.84□□□□□ -0.67
SEMA3F-208ENST00000470737 FAM27D1Q5T7N8 215 aa10.84□□□□□ -0.67
SEMA3F-208ENST00000470737 LINC00596Q86U02 117 aa10.84□□□□□ -0.67
SEMA3F-208ENST00000470737 UBALD1Q8TB05 177 aa10.84□□□□□ -0.67
SEMA3F-208ENST00000470737 CCDC107Q8WV48 283 aa10.84□□□□□ -0.67
SEMA3F-208ENST00000470737 CNBD2Q96M20 576 aa10.84□□□□□ -0.67
SEMA3F-208ENST00000470737 KCTD7Q96MP8 289 aa10.84□□□□□ -0.67
SEMA3F-208ENST00000470737 CHCHD6Q9BRQ6 235 aa10.84□□□□□ -0.67
SEMA3F-208ENST00000470737 IFT22Q9H7X7 185 aa10.84□□□□□ -0.67
SEMA3F-208ENST00000470737 TAS2R4Q9NYW5 299 aa10.84□□□□□ -0.67
SEMA3F-208ENST00000470737 IL36GQ9NZH8 169 aa10.84□□□□□ -0.67
SEMA3F-208ENST00000470737 ZNF107Q9UII5 783 aaPredicted RBP10.84□□□□□ -0.67
SEMA3F-208ENST00000470737 DNAH7Q8WXX0 4024 aa10.84□□□□□ -0.67
SEMA3F-208ENST00000470737 DYNC2H1Q8NCM8 4307 aaKnown RBP10.84□□□□□ -0.67
SEMA3F-208ENST00000470737 STAB2Q8WWQ8 2551 aa10.84□□□□□ -0.67
SEMA3F-208ENST00000470737 RYR2Q92736 4967 aa10.84□□□□□ -0.67
SEMA3F-208ENST00000470737 ORC5O43913 435 aa10.83□□□□□ -0.68
SEMA3F-208ENST00000470737 SC5DO75845 299 aa10.83□□□□□ -0.68
SEMA3F-208ENST00000470737 CDRT1O95170 752 aa10.83□□□□□ -0.68
SEMA3F-208ENST00000470737 PSMB8P28062 276 aa10.83□□□□□ -0.68
SEMA3F-208ENST00000470737 RBM11P57052 281 aaKnown RBP10.83□□□□□ -0.68
SEMA3F-208ENST00000470737 CFHR3Q02985 330 aa10.83□□□□□ -0.68
SEMA3F-208ENST00000470737 MLLT11Q13015 90 aaPredicted RBP10.83□□□□□ -0.68
SEMA3F-208ENST00000470737 TBCEQ15813 527 aaPredicted RBP10.83□□□□□ -0.68
SEMA3F-208ENST00000470737 NHLRC3Q5JS37 347 aa10.83□□□□□ -0.68
SEMA3F-208ENST00000470737 ZFP41Q8N8Y5 198 aa10.83□□□□□ -0.68
SEMA3F-208ENST00000470737 OR51A2Q8NGJ7 313 aa10.83□□□□□ -0.68
SEMA3F-208ENST00000470737 PHYHIPQ92561 330 aa10.83□□□□□ -0.68
SEMA3F-208ENST00000470737 RCHY1Q96PM5 261 aa10.83□□□□□ -0.68
SEMA3F-208ENST00000470737 DERL3Q96Q80 235 aa10.83□□□□□ -0.68
SEMA3F-208ENST00000470737 HSPB9Q9BQS6 159 aa10.83□□□□□ -0.68
SEMA3F-208ENST00000470737 PALMDQ9NP74 551 aa10.83□□□□□ -0.68
SEMA3F-208ENST00000470737 PLSCR3Q9NRY6 295 aa10.83□□□□□ -0.68
SEMA3F-208ENST00000470737 GNG12Q9UBI6 72 aa10.83□□□□□ -0.68
SEMA3F-208ENST00000470737 C15orf65H3BRN8 121 aa10.82□□□□□ -0.68
SEMA3F-208ENST00000470737 AIPO00170 330 aa10.82□□□□□ -0.68
SEMA3F-208ENST00000470737 GEMIN2O14893 280 aaKnown RBP10.82□□□□□ -0.68
SEMA3F-208ENST00000470737 SPINT2O43291 252 aa10.82□□□□□ -0.68
SEMA3F-208ENST00000470737 ZNF780AO75290 641 aaPredicted RBP10.82□□□□□ -0.68
SEMA3F-208ENST00000470737 IGF1P05019 195 aa10.82□□□□□ -0.68
SEMA3F-208ENST00000470737 CD37P11049 281 aa10.82□□□□□ -0.68
SEMA3F-208ENST00000470737 SERPINA2P20848 420 aa10.82□□□□□ -0.68
SEMA3F-208ENST00000470737 PSMA1P25786 263 aaKnown RBP10.82□□□□□ -0.68
SEMA3F-208ENST00000470737 ZNF93P35789 620 aaPredicted RBP10.82□□□□□ -0.68
SEMA3F-208ENST00000470737 ZNF616Q08AN1 781 aa10.82□□□□□ -0.68
SEMA3F-208ENST00000470737 MED22Q15528 200 aa10.82□□□□□ -0.68
SEMA3F-208ENST00000470737 MPV17LQ2QL34 196 aa10.82□□□□□ -0.68
SEMA3F-208ENST00000470737 CASC10Q5T4H9 136 aa10.82□□□□□ -0.68
SEMA3F-208ENST00000470737 ZNF429Q86V71 674 aa10.82□□□□□ -0.68
SEMA3F-208ENST00000470737 LYPD6Q86Y78 171 aa10.82□□□□□ -0.68
SEMA3F-208ENST00000470737 FAM71E2Q8N5Q1 922 aa10.82□□□□□ -0.68
SEMA3F-208ENST00000470737 TMEM104Q8NE00 496 aa10.82□□□□□ -0.68
SEMA3F-208ENST00000470737 OR1N2Q8NGR9 330 aa10.82□□□□□ -0.68
SEMA3F-208ENST00000470737 ST6GALNAC6Q969X2 333 aa10.82□□□□□ -0.68
SEMA3F-208ENST00000470737 UBE2E2Q96LR5 201 aa10.82□□□□□ -0.68
SEMA3F-208ENST00000470737 OR14A2Q96R54 314 aa10.82□□□□□ -0.68
SEMA3F-208ENST00000470737 ZMAT4Q9H898 229 aa10.82□□□□□ -0.68
SEMA3F-208ENST00000470737 ZNF580Q9UK33 172 aa10.82□□□□□ -0.68
SEMA3F-208ENST00000470737 VSIG4Q9Y279 399 aa10.82□□□□□ -0.68
SEMA3F-208ENST00000470737 ZNF736B4DX44 427 aaPredicted RBP10.81□□□□□ -0.68
SEMA3F-208ENST00000470737 SLC2A2P11168 524 aaPredicted RBP10.81□□□□□ -0.68
SEMA3F-208ENST00000470737 CPEP16870 476 aa10.81□□□□□ -0.68
SEMA3F-208ENST00000470737 F2RL1P55085 397 aa10.81□□□□□ -0.68
SEMA3F-208ENST00000470737 MMDQ15546 238 aa10.81□□□□□ -0.68
SEMA3F-208ENST00000470737 TMEM30BQ3MIR4 351 aa10.81□□□□□ -0.68
SEMA3F-208ENST00000470737 C6orf183Q5T699 404 aa10.81□□□□□ -0.68
SEMA3F-208ENST00000470737 DDI2Q5TDH0 399 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms