RNA–Protein interactions for RNA: ENST00000468108.1

CCDC66-211, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-211ENST00000468108 LINC00052Q96N35 136 aa4.34□□□□□ -1.71
CCDC66-211ENST00000468108 NKX3-1Q99801 234 aaPredicted RBP4.34□□□□□ -1.71
CCDC66-211ENST00000468108 GAL3ST1Q99999 423 aa4.34□□□□□ -1.71
CCDC66-211ENST00000468108 RTL8AQ9BWD3 113 aa4.34□□□□□ -1.71
CCDC66-211ENST00000468108 TMEM59Q9BXS4 323 aa4.34□□□□□ -1.71
CCDC66-211ENST00000468108 SELENOIQ9C0D9 397 aa4.34□□□□□ -1.71
CCDC66-211ENST00000468108 FXYD6Q9H0Q3 95 aa4.34□□□□□ -1.71
CCDC66-211ENST00000468108 OR51B6Q9H340 312 aa4.34□□□□□ -1.71
CCDC66-211ENST00000468108 OR51I2Q9H344 312 aa4.34□□□□□ -1.71
CCDC66-211ENST00000468108 ELL3Q9HB65 397 aaPredicted RBP4.34□□□□□ -1.71
CCDC66-211ENST00000468108 BEX1Q9HBH7 125 aa4.34□□□□□ -1.71
CCDC66-211ENST00000468108 KCNJ16Q9NPI9 418 aa4.34□□□□□ -1.71
CCDC66-211ENST00000468108 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.34□□□□□ -1.714e-7■■■■■ 32.3
CCDC66-211ENST00000468108 MYEF2Q9P2K5 600 aaKnown RBP4.34□□□□□ -1.71
CCDC66-211ENST00000468108 NDRG3Q9UGV2 375 aa4.34□□□□□ -1.71
CCDC66-211ENST00000468108 SHPKQ9UHJ6 478 aa4.34□□□□□ -1.71
CCDC66-211ENST00000468108 PURGQ9UJV8 347 aaKnown RBP4.34□□□□□ -1.71
CCDC66-211ENST00000468108 HSF4Q9ULV5 492 aa4.34□□□□□ -1.71
CCDC66-211ENST00000468108 TNFSF18Q9UNG2 199 aa4.34□□□□□ -1.71
CCDC66-211ENST00000468108 LAMP3Q9UQV4 416 aa4.34□□□□□ -1.71
CCDC66-211ENST00000468108 KCNK7Q9Y2U2 307 aa4.34□□□□□ -1.71
CCDC66-211ENST00000468108 PIEZO1Q92508 2521 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 HCFC1P51610 2035 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 IGLV3-9A0A075B6K5 115 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 TRBV6-7A0A0A0MS04 114 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 IGKV1-12A0A0C4DH73 117 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 LRP5LA4QPB2 252 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 DPRXA6NFQ7 191 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 OR5H14A6NHG9 310 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 A6NNC1 897 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 CEACAM18A8MTB9 384 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 FOXI3A8MTJ6 420 aaPredicted RBP4.33□□□□□ -1.72
CCDC66-211ENST00000468108 TRAPPC2LH3BP13 241 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 TSPAN4O14817 238 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 SOCS1O15524 211 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 SPRY1O43609 319 aaPredicted RBP4.33□□□□□ -1.72
CCDC66-211ENST00000468108 NDUFA2O43678 99 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 ANGPTL7O43827 346 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 TIMM8AO60220 97 aaPredicted RBP4.33□□□□□ -1.72
CCDC66-211ENST00000468108 IGKV1D-12P01611 117 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 CD3DP04234 171 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 PET100P0DJ07 73 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 TPT1P13693 172 aaKnown RBP4.33□□□□□ -1.72
CCDC66-211ENST00000468108 IGFBP2P18065 325 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 SERPINA2P20848 420 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 MPV17P39210 176 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 CBX5P45973 191 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 HAAOP46952 286 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 KLF3P57682 345 aaPredicted RBP4.33□□□□□ -1.72
CCDC66-211ENST00000468108 ERVS71-1P61550 626 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 ADORA2A-AS1P86434 159 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 SORDQ00796 357 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 IL24Q13007 206 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 SNTB1Q13884 538 aaKnown RBP4.33□□□□□ -1.72
CCDC66-211ENST00000468108 OR8G1Q15617 311 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 MOGAT2Q3SYC2 334 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 RNASE10Q5GAN6 216 aaKnown RBP4.33□□□□□ -1.72
CCDC66-211ENST00000468108 DMRTC1Q5HYR2 192 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 EIF5AL1Q6IS14 154 aaKnown RBP4.33□□□□□ -1.72
CCDC66-211ENST00000468108 C9orf47Q6ZRZ4 202 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 SLC25A26Q70HW3 274 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 LYG2Q86SG7 212 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 LINC00596Q86U02 117 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 SLC25A42Q86VD7 318 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 FJX1Q86VR8 437 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 Q8IYB0 196 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 SVBPQ8N300 66 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 ARRDC1Q8N5I2 433 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 ZNF611Q8N823 705 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 INO80EQ8NBZ0 244 aaPredicted RBP4.33□□□□□ -1.72
CCDC66-211ENST00000468108 ACBD4Q8NC06 268 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 BHLHE23Q8NDY6 225 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 OR10Z1Q8NGY1 313 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 COQ8AQ8NI60 647 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 THAP6Q8TBB0 222 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 CA5BP1Q8WTZ4 195 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 RAB3CQ96E17 227 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 WFIKKN1Q96NZ8 548 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 PHB2Q99623 299 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 ARPC5LQ9BPX5 153 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 NICN1Q9BSH3 213 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 ADAT1Q9BUB4 502 aaKnown RBP4.33□□□□□ -1.72
CCDC66-211ENST00000468108 NMES1Q9C002 83 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 CXXC4Q9H2H0 198 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 KCNK15Q9H427 330 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 PLK3Q9H4B4 646 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 BANF2Q9H503 90 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 ESRP2Q9H6T0 727 aaKnown RBP4.33□□□□□ -1.72
CCDC66-211ENST00000468108 ZNF442Q9H7R0 627 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 IFT46Q9NQC8 304 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 MTCH1Q9NZJ7 389 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 ST3GAL6Q9Y274 331 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 POLDIP2Q9Y2S7 368 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 CACNA1AO00555 2505 aa4.33□□□□□ -1.72
CCDC66-211ENST00000468108 CEP295Q9C0D2 2601 aa4.32□□□□□ -1.72
CCDC66-211ENST00000468108 TRAV14DV4A0A0A6YYC5 116 aa4.32□□□□□ -1.72
CCDC66-211ENST00000468108 A0A0A6YYD4 124 aa4.32□□□□□ -1.72
CCDC66-211ENST00000468108 A0A1W2PP11 408 aa4.32□□□□□ -1.72
CCDC66-211ENST00000468108 CXorf65A6NEN9 183 aa4.32□□□□□ -1.72
CCDC66-211ENST00000468108 SERPINE3A8MV23 424 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms