RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 DIDO1Q9BTC0 2240 aaKnown RBP16.41■□□□□ 0.22
LIMS2-212ENST00000466410 PRRC2CQ9Y520 2896 aaKnown RBP16.41■□□□□ 0.22
LIMS2-212ENST00000466410 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.4■□□□□ 0.22
LIMS2-212ENST00000466410 ATXN7O15265 892 aaPredicted RBP16.4■□□□□ 0.22
LIMS2-212ENST00000466410 CNOT4O95628 575 aaKnown RBP16.4■□□□□ 0.22
LIMS2-212ENST00000466410 IGHV2-5P01817 119 aa16.4■□□□□ 0.22
LIMS2-212ENST00000466410 SLC25A6P12236 298 aa16.4■□□□□ 0.22
LIMS2-212ENST00000466410 TLE4Q04727 773 aa16.4■□□□□ 0.22
LIMS2-212ENST00000466410 ZNF506Q5JVG8 444 aa16.4■□□□□ 0.22
LIMS2-212ENST00000466410 UNKLQ9H9P5 680 aaKnown RBP16.4■□□□□ 0.22
LIMS2-212ENST00000466410 WSB1Q9Y6I7 421 aa16.4■□□□□ 0.22
LIMS2-212ENST00000466410 DFFBO76075 338 aa16.4■□□□□ 0.22
LIMS2-212ENST00000466410 OR2H2O95918 312 aa16.4■□□□□ 0.22
LIMS2-212ENST00000466410 IGKV1-5P01602 117 aa16.4■□□□□ 0.22
LIMS2-212ENST00000466410 CELA3BP08861 270 aa16.4■□□□□ 0.22
LIMS2-212ENST00000466410 IAPPP10997 89 aa16.4■□□□□ 0.22
LIMS2-212ENST00000466410 MAS1LP35410 378 aa16.4■□□□□ 0.22
LIMS2-212ENST00000466410 SLC10A1Q14973 349 aa16.4■□□□□ 0.22
LIMS2-212ENST00000466410 FBXW9Q5XUX1 488 aa16.4■□□□□ 0.22
LIMS2-212ENST00000466410 SLC25A24Q6NUK1 477 aa16.4■□□□□ 0.22
LIMS2-212ENST00000466410 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.4■□□□□ 0.22
LIMS2-212ENST00000466410 MUCL1Q96DR8 90 aa16.4■□□□□ 0.22
LIMS2-212ENST00000466410 RSG1Q9BU20 258 aa16.4■□□□□ 0.22
LIMS2-212ENST00000466410 NPIPB11E5RHQ5 1161 aa16.39■□□□□ 0.22
LIMS2-212ENST00000466410 IFNA5P01569 189 aa16.39■□□□□ 0.22
LIMS2-212ENST00000466410 HSPB1P04792 205 aaKnown RBP16.39■□□□□ 0.22
LIMS2-212ENST00000466410 NQO2P16083 231 aa16.39■□□□□ 0.22
LIMS2-212ENST00000466410 HEPN1Q6WQI6 88 aa16.39■□□□□ 0.22
LIMS2-212ENST00000466410 ZNF429Q86V71 674 aa16.39■□□□□ 0.22
LIMS2-212ENST00000466410 SCCPDHQ8NBX0 429 aa16.39■□□□□ 0.22
LIMS2-212ENST00000466410 MDS2Q8NDY4 140 aa16.39■□□□□ 0.22
LIMS2-212ENST00000466410 KLF13Q9Y2Y9 288 aaPredicted RBP16.39■□□□□ 0.22
LIMS2-212ENST00000466410 GTF3C1Q12789 2109 aa16.39■□□□□ 0.21
LIMS2-212ENST00000466410 M0R296 226 aa16.39■□□□□ 0.21
LIMS2-212ENST00000466410 S100A8P05109 93 aa16.39■□□□□ 0.21
LIMS2-212ENST00000466410 OR8U8P0C7N1 319 aa16.39■□□□□ 0.21
LIMS2-212ENST00000466410 ZNF16P17020 682 aaPredicted RBP16.39■□□□□ 0.21
LIMS2-212ENST00000466410 TAGLN2P37802 199 aaKnown RBP16.39■□□□□ 0.21
LIMS2-212ENST00000466410 UBE2KP61086 200 aa16.39■□□□□ 0.21
LIMS2-212ENST00000466410 ARL16Q0P5N6 197 aa16.39■□□□□ 0.21
LIMS2-212ENST00000466410 ZNF497Q6ZNH5 498 aa16.39■□□□□ 0.21
LIMS2-212ENST00000466410 TRAPPC2LQ9UL33 140 aa16.39■□□□□ 0.21
LIMS2-212ENST00000466410 RBM7Q9Y580 266 aaKnown RBP16.39■□□□□ 0.21
LIMS2-212ENST00000466410 SYNGR2O43760 224 aa16.38■□□□□ 0.21
LIMS2-212ENST00000466410 METTL15P1P0C7V9 234 aa16.38■□□□□ 0.21
LIMS2-212ENST00000466410 ZNF585BQ52M93 769 aa16.38■□□□□ 0.21
LIMS2-212ENST00000466410 RBMXL1Q96E39 390 aaKnown RBP16.38■□□□□ 0.21
LIMS2-212ENST00000466410 RTL8AQ9BWD3 113 aa16.38■□□□□ 0.21
LIMS2-212ENST00000466410 HIPK2Q9H2X6 1198 aa16.38■□□□□ 0.21
LIMS2-212ENST00000466410 KCNS2Q9ULS6 477 aa16.38■□□□□ 0.21
LIMS2-212ENST00000466410 MMP24Q9Y5R2 645 aa16.38■□□□□ 0.21
LIMS2-212ENST00000466410 KLRC4-KLRK1H3BQV0 150 aa16.38■□□□□ 0.21
LIMS2-212ENST00000466410 WNT2P09544 360 aa16.38■□□□□ 0.21
LIMS2-212ENST00000466410 ZNF806P0C7X5 589 aa16.38■□□□□ 0.21
LIMS2-212ENST00000466410 SP9P0CG40 484 aa16.38■□□□□ 0.21
LIMS2-212ENST00000466410 ERVS71-1P61550 626 aa16.38■□□□□ 0.21
LIMS2-212ENST00000466410 B2MP61769 119 aa16.38■□□□□ 0.21
LIMS2-212ENST00000466410 DLK1P80370 383 aa16.38■□□□□ 0.21
LIMS2-212ENST00000466410 ALKBH6Q3KRA9 238 aa16.38■□□□□ 0.21
LIMS2-212ENST00000466410 LSM10Q969L4 123 aaKnown RBP16.38■□□□□ 0.21
LIMS2-212ENST00000466410 HBE1P02100 147 aa16.37■□□□□ 0.21
LIMS2-212ENST00000466410 SMIM6P0DI80 62 aa16.37■□□□□ 0.21
LIMS2-212ENST00000466410 S100A12P80511 92 aa16.37■□□□□ 0.21
LIMS2-212ENST00000466410 RNFT1Q5M7Z0 435 aa16.37■□□□□ 0.21
LIMS2-212ENST00000466410 DPPA3Q6W0C5 159 aa16.37■□□□□ 0.21
LIMS2-212ENST00000466410 NANOS1Q8WY41 292 aaKnown RBP16.37■□□□□ 0.21
LIMS2-212ENST00000466410 WDYHV1Q96HA8 205 aa16.37■□□□□ 0.21
LIMS2-212ENST00000466410 OR2J1Q9GZK6 312 aa16.37■□□□□ 0.21
LIMS2-212ENST00000466410 VSIRQ9H7M9 311 aa16.37■□□□□ 0.21
LIMS2-212ENST00000466410 SEBOXQ9HB31 216 aaPredicted RBP16.37■□□□□ 0.21
LIMS2-212ENST00000466410 RPRMQ9NS64 109 aa16.37■□□□□ 0.21
LIMS2-212ENST00000466410 SPRR3Q9UBC9 169 aa16.37■□□□□ 0.21
LIMS2-212ENST00000466410 WDR1O75083 606 aa16.37■□□□□ 0.21
LIMS2-212ENST00000466410 MDH2P40926 338 aaKnown RBP16.37■□□□□ 0.21
LIMS2-212ENST00000466410 ERVK11-1P61568 191 aa16.37■□□□□ 0.21
LIMS2-212ENST00000466410 ZNF343Q6P1L6 599 aa16.37■□□□□ 0.21
LIMS2-212ENST00000466410 HAPLN4Q86UW8 402 aa16.37■□□□□ 0.21
LIMS2-212ENST00000466410 BCL2L14Q9BZR8 327 aa16.37■□□□□ 0.21
LIMS2-212ENST00000466410 TREM2Q9NZC2 230 aa16.37■□□□□ 0.21
LIMS2-212ENST00000466410 LRP5LA4QPB2 252 aa16.36■□□□□ 0.21
LIMS2-212ENST00000466410 CDIPTO14735 213 aa16.36■□□□□ 0.21
LIMS2-212ENST00000466410 RAB2AP61019 212 aa16.36■□□□□ 0.21
LIMS2-212ENST00000466410 TBC1D28Q2M2D7 210 aa16.36■□□□□ 0.21
LIMS2-212ENST00000466410 MOB1BQ7L9L4 216 aa16.36■□□□□ 0.21
LIMS2-212ENST00000466410 PSENENQ9NZ42 101 aa16.36■□□□□ 0.21
LIMS2-212ENST00000466410 GNG13Q9P2W3 67 aa16.36■□□□□ 0.21
LIMS2-212ENST00000466410 AP4M1O00189 453 aa16.36■□□□□ 0.21
LIMS2-212ENST00000466410 S100A9P06702 114 aaKnown RBP16.36■□□□□ 0.21
LIMS2-212ENST00000466410 CD59P13987 128 aa16.36■□□□□ 0.21
LIMS2-212ENST00000466410 SELEP16581 610 aa16.36■□□□□ 0.21
LIMS2-212ENST00000466410 RPS10P46783 165 aaKnown RBP16.36■□□□□ 0.21
LIMS2-212ENST00000466410 KHDC3LQ587J8 217 aa16.36■□□□□ 0.21
LIMS2-212ENST00000466410 ATP1A1-AS1Q5TC04 95 aa16.36■□□□□ 0.21
LIMS2-212ENST00000466410 ZNF525Q8N782 197 aa16.36■□□□□ 0.21
LIMS2-212ENST00000466410 PIGBOS1A0A0B4J2F0 54 aa16.35■□□□□ 0.21
LIMS2-212ENST00000466410 SMPD2O60906 423 aa16.35■□□□□ 0.21
LIMS2-212ENST00000466410 CEACAM6P40199 344 aa16.35■□□□□ 0.21
LIMS2-212ENST00000466410 PPP1CBP62140 327 aa16.35■□□□□ 0.21
LIMS2-212ENST00000466410 C1QL4Q86Z23 238 aa16.35■□□□□ 0.21
LIMS2-212ENST00000466410 SCGB1C1Q8TD33 95 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms