RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 PPIL3Q9H2H8 161 aaKnown RBP11.23□□□□□ -0.61
CXCR4-203ENST00000466288 PLEKHA1Q9HB21 404 aa11.23□□□□□ -0.61
CXCR4-203ENST00000466288 MRM2Q9UI43 246 aaKnown RBP11.23□□□□□ -0.61
CXCR4-203ENST00000466288 PSG11Q9UQ72 335 aa11.23□□□□□ -0.61
CXCR4-203ENST00000466288 I3L521 148 aa11.22□□□□□ -0.61
CXCR4-203ENST00000466288 OGG1O15527 345 aa11.22□□□□□ -0.61
CXCR4-203ENST00000466288 JTBO76095 146 aa11.22□□□□□ -0.61
CXCR4-203ENST00000466288 APOL3O95236 402 aa11.22□□□□□ -0.61
CXCR4-203ENST00000466288 RPS19P39019 145 aaKnown RBP11.22□□□□□ -0.61
CXCR4-203ENST00000466288 KIAA0141Q14154 515 aaPredicted RBP11.22□□□□□ -0.61
CXCR4-203ENST00000466288 ODF4Q2M2E3 257 aa11.22□□□□□ -0.61
CXCR4-203ENST00000466288 RPL22L1Q6P5R6 122 aaKnown RBP11.22□□□□□ -0.61
CXCR4-203ENST00000466288 SLC35F2Q8IXU6 374 aa11.22□□□□□ -0.61
CXCR4-203ENST00000466288 OR1N2Q8NGR9 330 aa11.22□□□□□ -0.61
CXCR4-203ENST00000466288 ACOT12Q8WYK0 555 aa11.22□□□□□ -0.61
CXCR4-203ENST00000466288 C6orf62Q9GZU0 229 aaPredicted RBP11.22□□□□□ -0.61
CXCR4-203ENST00000466288 COMMD4Q9H0A8 199 aa11.22□□□□□ -0.61
CXCR4-203ENST00000466288 PLSCR3Q9NRY6 295 aa11.22□□□□□ -0.61
CXCR4-203ENST00000466288 ING3Q9NXR8 418 aa11.22□□□□□ -0.61
CXCR4-203ENST00000466288 KIAA2026Q5HYC2 2103 aa11.22□□□□□ -0.61
CXCR4-203ENST00000466288 A0A1W2PQL4 384 aaPredicted RBP11.21□□□□□ -0.61
CXCR4-203ENST00000466288 GABRPO00591 440 aa11.21□□□□□ -0.61
CXCR4-203ENST00000466288 SYT7O43581 403 aa11.21□□□□□ -0.61
CXCR4-203ENST00000466288 PTBP1P26599 531 aaKnown RBP eCLIP11.21□□□□□ -0.61
CXCR4-203ENST00000466288 MTNR1BP49286 362 aa11.21□□□□□ -0.61
CXCR4-203ENST00000466288 POU3F4P49335 361 aa11.21□□□□□ -0.61
CXCR4-203ENST00000466288 RBP2P50120 134 aa11.21□□□□□ -0.61
CXCR4-203ENST00000466288 RPS25P62851 125 aaKnown RBP11.21□□□□□ -0.61
CXCR4-203ENST00000466288 RUNX1Q01196 453 aa11.21□□□□□ -0.61
CXCR4-203ENST00000466288 ZNF85Q03923 595 aa11.21□□□□□ -0.61
CXCR4-203ENST00000466288 ZNF616Q08AN1 781 aa11.21□□□□□ -0.61
CXCR4-203ENST00000466288 DMKNQ6E0U4 476 aaPredicted RBP11.21□□□□□ -0.61
CXCR4-203ENST00000466288 Q6ZNX1 250 aa11.21□□□□□ -0.61
CXCR4-203ENST00000466288 CCDC190Q86UF4 302 aa11.21□□□□□ -0.61
CXCR4-203ENST00000466288 FAM71E2Q8N5Q1 922 aa11.21□□□□□ -0.61
CXCR4-203ENST00000466288 DNAAF1Q8NEP3 725 aa11.21□□□□□ -0.61
CXCR4-203ENST00000466288 DCUN1D4Q92564 292 aa11.21□□□□□ -0.61
CXCR4-203ENST00000466288 THRSPQ92748 146 aa11.21□□□□□ -0.61
CXCR4-203ENST00000466288 KCTD12Q96CX2 325 aaKnown RBP11.21□□□□□ -0.61
CXCR4-203ENST00000466288 CCDC32Q9BV29 185 aa11.21□□□□□ -0.61
CXCR4-203ENST00000466288 GNB4Q9HAV0 340 aa11.21□□□□□ -0.61
CXCR4-203ENST00000466288 OR6C3Q9NZP0 311 aa11.21□□□□□ -0.61
CXCR4-203ENST00000466288 IGHV3-72A0A0B4J1Y9 119 aa11.2□□□□□ -0.62
CXCR4-203ENST00000466288 IGKV1-9A0A0C4DH69 117 aa11.2□□□□□ -0.62
CXCR4-203ENST00000466288 IGKV1-12A0A0C4DH73 117 aa11.2□□□□□ -0.62
CXCR4-203ENST00000466288 SULT1C4O75897 302 aa11.2□□□□□ -0.62
CXCR4-203ENST00000466288 CDRT1O95170 752 aa11.2□□□□□ -0.62
CXCR4-203ENST00000466288 CYB5AP00167 134 aa11.2□□□□□ -0.62
CXCR4-203ENST00000466288 IGKV1D-12P01611 117 aa11.2□□□□□ -0.62
CXCR4-203ENST00000466288 ATP1B3P54709 279 aa11.2□□□□□ -0.62
CXCR4-203ENST00000466288 FABP5Q01469 135 aa11.2□□□□□ -0.62
CXCR4-203ENST00000466288 ATXN7L3Q14CW9 347 aaPredicted RBP11.2□□□□□ -0.62
CXCR4-203ENST00000466288 C22orf42Q6IC83 251 aa11.2□□□□□ -0.62
CXCR4-203ENST00000466288 Q6P435 159 aa11.2□□□□□ -0.62
CXCR4-203ENST00000466288 MZT2AQ6P582 158 aa11.2□□□□□ -0.62
CXCR4-203ENST00000466288 IZUMO1Q8IYV9 350 aa11.2□□□□□ -0.62
CXCR4-203ENST00000466288 RNF166Q96A37 237 aaPredicted RBP11.2□□□□□ -0.62
CXCR4-203ENST00000466288 C4orf36Q96KX1 117 aa11.2□□□□□ -0.62
CXCR4-203ENST00000466288 UBE2E2Q96LR5 201 aa11.2□□□□□ -0.62
CXCR4-203ENST00000466288 HSPB9Q9BQS6 159 aa11.2□□□□□ -0.62
CXCR4-203ENST00000466288 LINC00574Q9H8X3 128 aa11.2□□□□□ -0.62
CXCR4-203ENST00000466288 IGHV1-3A0A0C4DH29 117 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 J3QLW9 94 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 SLC33A1O00400 549 aaPredicted RBP11.19□□□□□ -0.62
CXCR4-203ENST00000466288 OVOL1O14753 267 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 SAP30O75446 220 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 LALBAP00709 142 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 IGHV4-30-4P0DP06 118 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 ZNF44P15621 663 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 ZNF19P17023 458 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 VDAC1P21796 283 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 TGFBR1P36897 503 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 GNB1P62873 340 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 SCN1BQ07699 218 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 ZNF816Q0VGE8 651 aaPredicted RBP11.19□□□□□ -0.62
CXCR4-203ENST00000466288 PDZK1IP1Q13113 114 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 DDI2Q5TDH0 399 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 FAM53AQ6NSI3 398 aaPredicted RBP11.19□□□□□ -0.62
CXCR4-203ENST00000466288 CATSPERDQ86XM0 798 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 ZNF491Q8N8L2 437 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 TMEM203Q969S6 136 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 SMIM19Q96E16 107 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 KLK15Q9H2R5 256 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 RNF167Q9H6Y7 350 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 ISG20L2Q9H9L3 353 aaKnown RBP11.19□□□□□ -0.62
CXCR4-203ENST00000466288 CALYQ9NYX4 217 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 IDI2-AS1Q9NZ38 188 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 ADAM30Q9UKF2 790 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 DNAH10Q8IVF4 4471 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 KMT2AQ03164 3969 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 TRAV1-2A0A0B4J238 106 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 NPIPB11E5RHQ5 1161 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 HSD17B6O14756 317 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 UPK1BO75841 260 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 SC5DO75845 299 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 ARL6IP5O75915 188 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 RPP14O95059 124 aaKnown RBP11.19□□□□□ -0.62
CXCR4-203ENST00000466288 IGF1P05019 195 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 REG1BP48304 166 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 GNG10P50151 68 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms