RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 EXOSC4Q9NPD3 245 aaKnown RBP4.29□□□□□ -1.72
NCL-208ENST00000466274 ZC4H2Q9NQZ6 224 aa4.29□□□□□ -1.72
NCL-208ENST00000466274 CALYQ9NYX4 217 aa4.29□□□□□ -1.72
NCL-208ENST00000466274 CNOT2Q9NZN8 540 aaKnown RBP4.29□□□□□ -1.72
NCL-208ENST00000466274 PEF1Q9UBV8 284 aaKnown RBP4.29□□□□□ -1.72
NCL-208ENST00000466274 PKD1P98161 4303 aa4.29□□□□□ -1.72
NCL-208ENST00000466274 TRAV10A0A0B4J240 114 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 TRBV2A0A0J9YWF9 115 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 FAM230AA0A1W2PPH8 454 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 A0A1W2PRQ8 180 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 H3BUA1 57 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 J3KTA2 159 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 RAB27BO00194 218 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 SIRPB1O00241 398 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 SOX15O60248 233 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 DHRS3O75911 302 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 IL1AP01583 271 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 CSN2P05814 226 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 AADACP22760 399 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 GLP1RP43220 463 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 DGCR6Q14129 220 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 MED22Q15528 200 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 LRRC23Q53EV4 343 aaPredicted RBP4.28□□□□□ -1.72
NCL-208ENST00000466274 AKIRIN2Q53H80 203 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 MZT2AQ6P582 158 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 CD200R1LQ6Q8B3 271 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 FAM58AQ8N1B3 248 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 TMEM104Q8NE00 496 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 OR13A1Q8NGR1 328 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 OR6N2Q8NGY6 317 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 SNAPC3Q92966 411 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 SLAMF9Q96A28 289 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 INTS14Q96SY0 518 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 RARRES2Q99969 163 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 EBF4Q9BQW3 602 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 OSBPL10Q9BXB5 764 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 OR52D1Q9H346 318 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 GPR173Q9NS66 373 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 MTCH1Q9NZJ7 389 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 KLHDC2Q9Y2U9 406 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 FAM32AQ9Y421 112 aaKnown RBP4.28□□□□□ -1.72
NCL-208ENST00000466274 A3GALT2U3KPV4 340 aa4.28□□□□□ -1.72
NCL-208ENST00000466274 APOBP04114 4563 aaKnown RBP4.28□□□□□ -1.73
NCL-208ENST00000466274 DNAH6Q9C0G6 4158 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 IGLV5-39A0A0G2JS06 123 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 LOC110117498-PIK3R3F6TDL0 507 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 ANGPT2O15123 496 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 NBR2O15453 112 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 OR2H2O95918 312 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 H1F0P07305 194 aaKnown RBP4.27□□□□□ -1.73
NCL-208ENST00000466274 LYNP07948 512 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 FGF2P09038 288 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 SCTP09683 121 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 ZNF44P15621 663 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 PRKACAP17612 351 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 DUSP1P28562 367 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 HTR1FP30939 366 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 KDELR2P33947 212 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 IFNGR2P38484 337 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 ACTBP60709 375 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 VSNL1P62760 191 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 IFFO1Q0D2I5 559 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 LTC4SQ16873 150 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 C5orf64Q2M2E5 130 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 AGKQ53H12 422 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 Q5VSD8 79 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 UNQ5815/PRO19632Q6UWF5 114 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 Q6ZR54 194 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 SLC25A26Q70HW3 274 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 ZNF367Q7RTV3 350 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 PPP1R27Q86WC6 154 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 ERI1Q8IV48 349 aaKnown RBP4.27□□□□□ -1.73
NCL-208ENST00000466274 UBE2DNLQ8IWF7 75 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 SLC38A6Q8IZM9 456 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 LINC00311Q8N616 119 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 C8orf31Q8N9H6 132 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 OR13C5Q8NGS8 318 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 MPLKIPQ8TAP9 179 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 OR51E1Q8TCB6 317 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 THEM6Q8WUY1 208 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 ZNRF4Q8WWF5 429 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 THRSPQ92748 146 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 ASB9Q96DX5 294 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 NDUFAF3Q9BU61 184 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 TM2D2Q9BX73 214 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 ANKRD60Q9BZ19 345 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 C6orf62Q9GZU0 229 aaPredicted RBP4.27□□□□□ -1.73
NCL-208ENST00000466274 HRH4Q9H3N8 390 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 NCOR1P1Q9H4R4 102 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 LINC00574Q9H8X3 128 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 FAM118AQ9NWS6 357 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 NUBP2Q9Y5Y2 271 aa4.27□□□□□ -1.73
NCL-208ENST00000466274 IGLV2-18A0A075B6J9 118 aa4.26□□□□□ -1.73
NCL-208ENST00000466274 MEIKINA0A087WXM9 373 aa4.26□□□□□ -1.73
NCL-208ENST00000466274 TMEM269A0A1B0GVZ9 245 aa4.26□□□□□ -1.73
NCL-208ENST00000466274 A0A1W2PPE3 182 aa4.26□□□□□ -1.73
NCL-208ENST00000466274 ZNF736B4DX44 427 aaPredicted RBP4.26□□□□□ -1.73
NCL-208ENST00000466274 NPIPB11E5RHQ5 1161 aa4.26□□□□□ -1.73
NCL-208ENST00000466274 F8VVB4 439 aa4.26□□□□□ -1.73
NCL-208ENST00000466274 F8VWA3 439 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms