RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 RORCP51449 518 aa11.09□□□□□ -0.63
LIMD1-203ENST00000465039 HLA-DRB3P79483 266 aa11.09□□□□□ -0.63
LIMD1-203ENST00000465039 PRB3Q04118 309 aaPredicted RBP11.09□□□□□ -0.63
LIMD1-203ENST00000465039 PLA2G7Q13093 441 aa11.09□□□□□ -0.63
LIMD1-203ENST00000465039 MOGAT2Q3SYC2 334 aa11.09□□□□□ -0.63
LIMD1-203ENST00000465039 UBE2NLQ5JXB2 153 aa11.09□□□□□ -0.63
LIMD1-203ENST00000465039 HACD4Q5VWC8 232 aa11.09□□□□□ -0.63
LIMD1-203ENST00000465039 SLC25A48Q6ZT89 311 aaKnown RBP11.09□□□□□ -0.63
LIMD1-203ENST00000465039 OR8H3Q8N146 312 aa11.09□□□□□ -0.63
LIMD1-203ENST00000465039 ZNF439Q8NDP4 499 aa11.09□□□□□ -0.63
LIMD1-203ENST00000465039 RFESDQ8TAC1 157 aa11.09□□□□□ -0.63
LIMD1-203ENST00000465039 NDNFQ8TB73 568 aa11.09□□□□□ -0.63
LIMD1-203ENST00000465039 YPEL2Q96QA6 119 aa11.09□□□□□ -0.63
LIMD1-203ENST00000465039 OR2S2Q9NQN1 319 aa11.09□□□□□ -0.63
LIMD1-203ENST00000465039 DIABLOQ9NR28 239 aa11.09□□□□□ -0.63
LIMD1-203ENST00000465039 SOX21Q9Y651 276 aaPredicted RBP11.09□□□□□ -0.63
LIMD1-203ENST00000465039 TRAV39A0A0B4J263 110 aa11.08□□□□□ -0.64
LIMD1-203ENST00000465039 A0A1W2PRD5 423 aa11.08□□□□□ -0.64
LIMD1-203ENST00000465039 A0A1W2PRF3 423 aa11.08□□□□□ -0.64
LIMD1-203ENST00000465039 A0A1W2PRM7 423 aa11.08□□□□□ -0.64
LIMD1-203ENST00000465039 RNF212BA8MTL3 300 aa11.08□□□□□ -0.64
LIMD1-203ENST00000465039 TPPPO94811 219 aa11.08□□□□□ -0.64
LIMD1-203ENST00000465039 IGHV4-59P01825 116 aa11.08□□□□□ -0.64
LIMD1-203ENST00000465039 APOA1P02647 267 aa11.08□□□□□ -0.64
LIMD1-203ENST00000465039 LPLP06858 475 aa11.08□□□□□ -0.64
LIMD1-203ENST00000465039 FCGR3AP08637 254 aa11.08□□□□□ -0.64
LIMD1-203ENST00000465039 MNDAP41218 407 aa11.08□□□□□ -0.64
LIMD1-203ENST00000465039 COMPP49747 757 aaPredicted RBP11.08□□□□□ -0.64
LIMD1-203ENST00000465039 SSX2Q16385 188 aa11.08□□□□□ -0.64
LIMD1-203ENST00000465039 TPTE2P1Q5T6R2 138 aa11.08□□□□□ -0.64
LIMD1-203ENST00000465039 LHFPL4Q7Z7J7 247 aa11.08□□□□□ -0.64
LIMD1-203ENST00000465039 OR4A4PQ8NGN8 299 aa11.08□□□□□ -0.64
LIMD1-203ENST00000465039 OR10X1Q8NGY0 326 aa11.08□□□□□ -0.64
LIMD1-203ENST00000465039 S100A16Q96FQ6 103 aaKnown RBP11.08□□□□□ -0.64
LIMD1-203ENST00000465039 SSX3Q99909 188 aa11.08□□□□□ -0.64
LIMD1-203ENST00000465039 C19orf24Q9BVV8 132 aa11.08□□□□□ -0.64
LIMD1-203ENST00000465039 CHIAQ9BZP6 476 aa11.08□□□□□ -0.64
LIMD1-203ENST00000465039 ABCB10Q9NRK6 738 aa11.08□□□□□ -0.64
LIMD1-203ENST00000465039 A0A1B0GUS0 222 aa11.07□□□□□ -0.64
LIMD1-203ENST00000465039 TRDCB7Z8K6 153 aa11.07□□□□□ -0.64
LIMD1-203ENST00000465039 ZNF701M0R085 212 aaPredicted RBP11.07□□□□□ -0.64
LIMD1-203ENST00000465039 NDUFA7O95182 113 aa11.07□□□□□ -0.64
LIMD1-203ENST00000465039 HKR1P10072 659 aa11.07□□□□□ -0.64
LIMD1-203ENST00000465039 GNB3P16520 340 aa11.07□□□□□ -0.64
LIMD1-203ENST00000465039 ZNF182P17025 639 aaPredicted RBP11.07□□□□□ -0.64
LIMD1-203ENST00000465039 ZBTB25P24278 435 aa11.07□□□□□ -0.64
LIMD1-203ENST00000465039 SOX6P35712 828 aa11.07□□□□□ -0.64
LIMD1-203ENST00000465039 TGFBR1P36897 503 aa11.07□□□□□ -0.64
LIMD1-203ENST00000465039 TALDO1P37837 337 aa11.07□□□□□ -0.64
LIMD1-203ENST00000465039 ZNF816Q0VGE8 651 aaPredicted RBP11.07□□□□□ -0.64
LIMD1-203ENST00000465039 ARFRP1Q13795 201 aa11.07□□□□□ -0.64
LIMD1-203ENST00000465039 HABP2Q14520 560 aaPredicted RBP11.07□□□□□ -0.64
LIMD1-203ENST00000465039 LDLRAD2Q5SZI1 272 aa11.07□□□□□ -0.64
LIMD1-203ENST00000465039 FAM71F2Q6NXP2 309 aa11.07□□□□□ -0.64
LIMD1-203ENST00000465039 MZT2AQ6P582 158 aa11.07□□□□□ -0.64
LIMD1-203ENST00000465039 Q6ZPA2 131 aa11.07□□□□□ -0.64
LIMD1-203ENST00000465039 C16orf82Q7Z2V1 217 aa11.07□□□□□ -0.64
LIMD1-203ENST00000465039 OR5H6Q8NGV6 325 aa11.07□□□□□ -0.64
LIMD1-203ENST00000465039 OR1L1Q8NH94 360 aa11.07□□□□□ -0.64
LIMD1-203ENST00000465039 C17orf50Q8WW18 174 aa11.07□□□□□ -0.64
LIMD1-203ENST00000465039 EDARADDQ8WWZ3 215 aa11.07□□□□□ -0.64
LIMD1-203ENST00000465039 RPEQ96AT9 228 aa11.07□□□□□ -0.64
LIMD1-203ENST00000465039 CABLES2Q9BTV7 478 aa11.07□□□□□ -0.64
LIMD1-203ENST00000465039 TOLLIPQ9H0E2 274 aa11.07□□□□□ -0.64
LIMD1-203ENST00000465039 RANBP3Q9H6Z4 567 aaPredicted RBP11.07□□□□□ -0.64
LIMD1-203ENST00000465039 TMEM89A2RUT3 159 aa11.06□□□□□ -0.64
LIMD1-203ENST00000465039 H3BUX3 64 aa11.06□□□□□ -0.64
LIMD1-203ENST00000465039 XRCC3O43542 346 aa11.06□□□□□ -0.64
LIMD1-203ENST00000465039 GPR137BO60478 399 aa11.06□□□□□ -0.64
LIMD1-203ENST00000465039 ZNF260Q3ZCT1 412 aa11.06□□□□□ -0.64
LIMD1-203ENST00000465039 CDNFQ49AH0 187 aa11.06□□□□□ -0.64
LIMD1-203ENST00000465039 MORN2Q502X0 79 aa11.06□□□□□ -0.64
LIMD1-203ENST00000465039 BAIAP2L2Q6UXY1 529 aa11.06□□□□□ -0.64
LIMD1-203ENST00000465039 CLVS1Q8IUQ0 354 aaPredicted RBP11.06□□□□□ -0.64
LIMD1-203ENST00000465039 PRR18Q8N4B5 295 aa11.06□□□□□ -0.64
LIMD1-203ENST00000465039 SAMD12Q8N8I0 201 aa11.06□□□□□ -0.64
LIMD1-203ENST00000465039 OR2AK2Q8NG84 335 aa11.06□□□□□ -0.64
LIMD1-203ENST00000465039 SPATA3Q8NHX4 192 aa11.06□□□□□ -0.64
LIMD1-203ENST00000465039 TOMM40LQ969M1 308 aa11.06□□□□□ -0.64
LIMD1-203ENST00000465039 ST6GALNAC6Q969X2 333 aa11.06□□□□□ -0.64
LIMD1-203ENST00000465039 NAA50Q9GZZ1 169 aaKnown RBP11.06□□□□□ -0.64
LIMD1-203ENST00000465039 CCDC59Q9P031 241 aaKnown RBP11.06□□□□□ -0.64
LIMD1-203ENST00000465039 TCF19Q9Y242 345 aa11.06□□□□□ -0.64
LIMD1-203ENST00000465039 HSD17B6O14756 317 aa11.05□□□□□ -0.64
LIMD1-203ENST00000465039 FABP7O15540 132 aa11.05□□□□□ -0.64
LIMD1-203ENST00000465039 LANCL1O43813 399 aa11.05□□□□□ -0.64
LIMD1-203ENST00000465039 GAPDHP04406 335 aaKnown RBP11.05□□□□□ -0.64
LIMD1-203ENST00000465039 CRYBA1P05813 215 aa11.05□□□□□ -0.64
LIMD1-203ENST00000465039 CTXN2P0C2S0 81 aa11.05□□□□□ -0.64
LIMD1-203ENST00000465039 CBX5P45973 191 aa11.05□□□□□ -0.64
LIMD1-203ENST00000465039 GNG2P59768 71 aa11.05□□□□□ -0.64
LIMD1-203ENST00000465039 ACTG1P63261 375 aa11.05□□□□□ -0.64
LIMD1-203ENST00000465039 FOXL1Q12952 345 aa11.05□□□□□ -0.64
LIMD1-203ENST00000465039 LTC4SQ16873 150 aa11.05□□□□□ -0.64
LIMD1-203ENST00000465039 OLFML2AQ68BL7 652 aa11.05□□□□□ -0.64
LIMD1-203ENST00000465039 THNSL2Q86YJ6 484 aa11.05□□□□□ -0.64
LIMD1-203ENST00000465039 DYNAPQ8N1N2 210 aa11.05□□□□□ -0.64
LIMD1-203ENST00000465039 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.05□□□□□ -0.64
LIMD1-203ENST00000465039 SETD6Q8TBK2 473 aa11.05□□□□□ -0.64
LIMD1-203ENST00000465039 PIFOQ8TCI5 191 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms