RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 TNFAIP8L1Q8WVP5 186 aa2.34□□□□□ -2.03
USH2A-203ENST00000463147 RTBDNQ9BSG5 229 aaPredicted RBP2.34□□□□□ -2.03
USH2A-203ENST00000463147 ZNF717Q9BY31 904 aaPredicted RBP2.34□□□□□ -2.03
USH2A-203ENST00000463147 MROQ9BYG7 248 aa2.34□□□□□ -2.03
USH2A-203ENST00000463147 DERL2Q9GZP9 239 aa2.34□□□□□ -2.03
USH2A-203ENST00000463147 ALX4Q9H161 411 aaPredicted RBP2.34□□□□□ -2.03
USH2A-203ENST00000463147 ZNF492Q9P255 531 aa2.34□□□□□ -2.03
USH2A-203ENST00000463147 TIAM1Q13009 1591 aa2.34□□□□□ -2.03
USH2A-203ENST00000463147 CEP170Q5SW79 1584 aa2.34□□□□□ -2.03
USH2A-203ENST00000463147 SPATA31E1Q6ZUB1 1445 aa2.34□□□□□ -2.04
USH2A-203ENST00000463147 CAMSAP2Q08AD1 1489 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 LRRC9Q6ZRR7 1453 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 FYCO1Q9BQS8 1478 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 ARHGAP35Q9NRY4 1499 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 RAPGEF2Q9Y4G8 1499 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 EPRSP07814 1512 aaKnown RBP2.33□□□□□ -2.04
USH2A-203ENST00000463147 CLASP1Q7Z460 1538 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 SHROOM2Q13796 1616 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 PTPN23Q9H3S7 1636 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 IGLV3-12A0A075B6K2 115 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 IGHV3OR16-8A0A075B7F1 116 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 GMNCA6NCL1 334 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 F5H5P2 479 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 M0QYV0 167 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 SLC16A4O15374 487 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 RGS5O15539 181 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 POP7O75817 140 aaKnown RBP2.33□□□□□ -2.04
USH2A-203ENST00000463147 ARL6IP5O75915 188 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 LYPLA2O95372 231 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 FSTL3O95633 263 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 LTAP01374 205 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 IFNA5P01569 189 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 ZNF286BP0CG31 522 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 CD99P14209 185 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 GADD45AP24522 165 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 RPS12P25398 132 aaKnown RBP2.33□□□□□ -2.04
USH2A-203ENST00000463147 MIPP30301 263 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 MPV17P39210 176 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 IDH2P48735 452 aaKnown RBP2.33□□□□□ -2.04
USH2A-203ENST00000463147 ACTBP60709 375 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 ACTG1P63261 375 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 PPP1R1AQ13522 171 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 SNCBQ16143 134 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 CLEC12BQ2HXU8 276 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 TRMT12Q53H54 448 aaKnown RBP2.33□□□□□ -2.04
USH2A-203ENST00000463147 HENMT1Q5T8I9 393 aaKnown RBP2.33□□□□□ -2.04
USH2A-203ENST00000463147 Q6ZRU5 148 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 OR8K1Q8NGG5 319 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 OR10D3Q8NH80 312 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 ERMNQ8TAM6 284 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 DTD1Q8TEA8 209 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 LZICQ8WZA0 190 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 STARD4Q96DR4 205 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 TSC22D3Q99576 134 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 DHRS9Q9BPW9 319 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 MAP1LC3AQ9H492 121 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 FGFR1OP2Q9NVK5 253 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 ALG5Q9Y673 324 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 SLC22A7Q9Y694 548 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 HFM1A2PYH4 1435 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 PTPRGP23470 1445 aa2.33□□□□□ -2.04
USH2A-203ENST00000463147 HECW1Q76N89 1606 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 GOLGA6L4A6NEF3 574 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 LRRN3E7EW58 273 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 H3BQF6 201 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 PFDN6O15212 129 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 SMIM24O75264 130 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 ZNF189O75820 626 aaPredicted RBP2.32□□□□□ -2.04
USH2A-203ENST00000463147 CDRT1O95170 752 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 SERPINA6P08185 405 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 CTSEP14091 401 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 ZNF708P17019 499 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 CD34P28906 385 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 AGTR1P30556 359 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 HAAOP46952 286 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 H2BFSP57053 126 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 RBX1P62877 108 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 DEFA6Q01524 100 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 FMODQ06828 376 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 ENDOGQ14249 297 aaKnown RBP2.32□□□□□ -2.04
USH2A-203ENST00000463147 IMPG1Q17R60 797 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 SPIN4Q56A73 249 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 CST9Q5W186 159 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 EBLN2Q6P2I7 272 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 CD200R1LQ6Q8B3 271 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 EEF1AKMT1Q8WVE0 214 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 KCTD4Q8WVF5 259 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 DYDC1Q8WWB3 177 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 PACRGQ96M98 296 aaPredicted RBP2.32□□□□□ -2.04
USH2A-203ENST00000463147 OR2V2Q96R30 315 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 GNB1LQ9BYB4 327 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 BCL2L14Q9BZR8 327 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 TXNIPQ9H3M7 391 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 CENPHQ9H3R5 247 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 HRASLSQ9HDD0 168 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 SPANXB1Q9NS25 103 aaPredicted RBP2.32□□□□□ -2.04
USH2A-203ENST00000463147 BABAM2Q9NXR7 383 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 PAIP2BQ9ULR5 123 aaKnown RBP2.32□□□□□ -2.04
USH2A-203ENST00000463147 ABCC11Q96J66 1382 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 PLCH2O75038 1416 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms