RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 LRRTM1Q86UE6 522 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 FOXRED2Q8IWF2 684 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 IZUMO1Q8IYV9 350 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 Q8N6K4 173 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 Q8N9W7 124 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 ZNF439Q8NDP4 499 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 OR51D1Q8NGF3 324 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 OR1L1Q8NH94 360 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 KCNG3Q8TAE7 436 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 UBALD1Q8TB05 177 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 RCC1LQ96I51 464 aaKnown RBP5.76□□□□□ -1.49
PTPRF-210ENST00000463041 NEDD4LQ96PU5 975 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 YPEL2Q96QA6 119 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 RASL11BQ9BPW5 248 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 ABCG5Q9H222 651 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 DUSP21Q9H596 190 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 TAF9BQ9HBM6 251 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 ISYNA1Q9NPH2 558 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 OR2S2Q9NQN1 319 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 PLSCR3Q9NRY6 295 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 LIN7CQ9NUP9 197 aaKnown RBP5.76□□□□□ -1.49
PTPRF-210ENST00000463041 NKX1-2Q9UD57 310 aaPredicted RBP5.76□□□□□ -1.49
PTPRF-210ENST00000463041 SORL1Q92673 2214 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 IGHV3-72A0A0B4J1Y9 119 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 ANKRD65E5RJM6 399 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 AP4M1O00189 453 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 RGS11O94810 467 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 BPNT1O95861 308 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 MPIG6BO95866 241 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 UCHL1P09936 223 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 VSIG8P0DPA2 414 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 IGLL1P15814 213 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 MYF6P23409 242 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 CHATP28329 748 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 HTR2CP28335 458 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 MYCNOSP40205 109 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 PSMD7P51665 324 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 RPS27AP62979 156 aaKnown RBP5.75□□□□□ -1.49
PTPRF-210ENST00000463041 INSL4Q14641 139 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 MED22Q15528 200 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 PNLIPRP3Q17RR3 467 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 HSD17B12Q53GQ0 312 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 KHDC1LQ5JSQ8 128 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 RBM48Q5RL73 367 aaKnown RBP5.75□□□□□ -1.49
PTPRF-210ENST00000463041 FAM27D1Q5T7N8 215 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 FOXB2Q5VYV0 432 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 FAM53AQ6NSI3 398 aaPredicted RBP5.75□□□□□ -1.49
PTPRF-210ENST00000463041 TEX38Q6PEX7 206 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 STPG2Q8N412 459 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 PRR18Q8N4B5 295 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 OR10V1Q8NGI7 309 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 MRPL30Q8TCC3 161 aaKnown RBP5.75□□□□□ -1.49
PTPRF-210ENST00000463041 UFD1Q92890 307 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 PHF21AQ96BD5 680 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 GALMQ96C23 342 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 NOL4LQ96MY1 436 aaPredicted RBP5.75□□□□□ -1.49
PTPRF-210ENST00000463041 S1PR3Q99500 378 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 CHCHD6Q9BRQ6 235 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 FAAP24Q9BTP7 215 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 TMED9Q9BVK6 235 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 TM2D1Q9BX74 207 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 GPR61Q9BZJ8 451 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 GHITMQ9H3K2 345 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 RIMS4Q9H426 269 aaPredicted RBP5.75□□□□□ -1.49
PTPRF-210ENST00000463041 JPT1Q9UK76 154 aa5.75□□□□□ -1.49
PTPRF-210ENST00000463041 LSM2Q9Y333 95 aaKnown RBP5.75□□□□□ -1.49
PTPRF-210ENST00000463041 LINC01548A6NM66 108 aa5.74□□□□□ -1.49
PTPRF-210ENST00000463041 TMEM14DPA8MWL7 114 aa5.74□□□□□ -1.49
PTPRF-210ENST00000463041 ZNF736B4DX44 427 aaPredicted RBP5.74□□□□□ -1.49
PTPRF-210ENST00000463041 SLC22A1O15245 554 aa5.74□□□□□ -1.49
PTPRF-210ENST00000463041 SLC31A2O15432 143 aa5.74□□□□□ -1.49
PTPRF-210ENST00000463041 RGS10O43665 173 aa5.74□□□□□ -1.49
PTPRF-210ENST00000463041 ARL6IP5O75915 188 aa5.74□□□□□ -1.49
PTPRF-210ENST00000463041 PRB2P02812 416 aaPredicted RBP5.74□□□□□ -1.49
PTPRF-210ENST00000463041 PSMA1P25786 263 aaKnown RBP5.74□□□□□ -1.49
PTPRF-210ENST00000463041 BLVRBP30043 206 aaPredicted RBP5.74□□□□□ -1.49
PTPRF-210ENST00000463041 SOX6P35712 828 aa5.74□□□□□ -1.49
PTPRF-210ENST00000463041 GPR12P47775 334 aa5.74□□□□□ -1.49
PTPRF-210ENST00000463041 THBS3P49746 956 aa5.74□□□□□ -1.49
PTPRF-210ENST00000463041 F2RL1P55085 397 aa5.74□□□□□ -1.49
PTPRF-210ENST00000463041 RPL23AP62750 156 aaKnown RBP5.74□□□□□ -1.49
PTPRF-210ENST00000463041 QRFPP83859 136 aa5.74□□□□□ -1.49
PTPRF-210ENST00000463041 LIPKQ5VXJ0 399 aa5.74□□□□□ -1.49
PTPRF-210ENST00000463041 OR10K2Q6IF99 312 aa5.74□□□□□ -1.49
PTPRF-210ENST00000463041 Q6ZPA2 131 aa5.74□□□□□ -1.49
PTPRF-210ENST00000463041 OR2W3Q7Z3T1 314 aa5.74□□□□□ -1.49
PTPRF-210ENST00000463041 FAM89BQ8N5H3 189 aa5.74□□□□□ -1.49
PTPRF-210ENST00000463041 OR52L2PQ8NGH6 319 aa5.74□□□□□ -1.49
PTPRF-210ENST00000463041 OR6M1Q8NGM8 313 aa5.74□□□□□ -1.49
PTPRF-210ENST00000463041 MRAPQ8TCY5 172 aa5.74□□□□□ -1.49
PTPRF-210ENST00000463041 FAM46BQ96A09 425 aa5.74□□□□□ -1.49
PTPRF-210ENST00000463041 SULT4A1Q9BR01 284 aa5.74□□□□□ -1.49
PTPRF-210ENST00000463041 URM1Q9BTM9 101 aaKnown RBP5.74□□□□□ -1.49
PTPRF-210ENST00000463041 MCRIP2Q9BUT9 160 aaKnown RBP5.74□□□□□ -1.49
PTPRF-210ENST00000463041 TMEM59Q9BXS4 323 aa5.74□□□□□ -1.49
PTPRF-210ENST00000463041 VCX3BQ9H321 246 aa5.74□□□□□ -1.49
PTPRF-210ENST00000463041 PLEKHJ1Q9NW61 149 aa5.74□□□□□ -1.49
PTPRF-210ENST00000463041 AURKAIP1Q9NWT8 199 aaPredicted RBP5.74□□□□□ -1.49
PTPRF-210ENST00000463041 ABRACLQ9P1F3 81 aa5.74□□□□□ -1.49
PTPRF-210ENST00000463041 ZMAT5Q9UDW3 170 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms