RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 RBM38Q9H0Z9 239 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-212ENST00000461239 NDUFB11Q9NX14 153 aa6.53□□□□□ -1.36
ECHDC1-212ENST00000461239 C1RLQ9NZP8 487 aa6.53□□□□□ -1.36
ECHDC1-212ENST00000461239 RPUSD1Q9UJJ7 312 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-212ENST00000461239 A0A0G2JMP0 313 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 A0A0X1KG70 313 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 K7N7A8 449 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 NDUFB3O43676 98 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 OR2H2O95918 312 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 HAND1O96004 215 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 SMIM18P0DKX4 95 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 PRKACAP17612 351 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 SRMP19623 302 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 HOXD3P31249 432 aaPredicted RBP6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 SNU13P55769 128 aaKnown RBP6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 DLX1P56177 255 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 CAV3P56539 151 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 PPP3R1P63098 170 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 UBE2V1Q13404 147 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 SYT6Q5T7P8 510 aaPredicted RBP6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 TCF23Q7RTU1 214 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 SLC36A1Q7Z2H8 476 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 NR2C2APQ86WQ0 139 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 ZNF561Q8N587 486 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 C11orf42Q8N5U0 333 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 Q8N7P7 452 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 OR4S1Q8NGB4 309 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 OR4M2Q8NGB6 313 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 OR51T1Q8NGJ9 327 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 C8orf46Q8TAG6 207 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 MED30Q96HR3 178 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 TBX15Q96SF7 602 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 SIRPDQ9H106 197 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 ZNF696Q9H7X3 374 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 C19orf12Q9NSK7 152 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 IL36GQ9NZH8 169 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 OR5V1Q9UGF6 321 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 GSTK1Q9Y2Q3 226 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 SOX21Q9Y651 276 aaPredicted RBP6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 ATRQ13535 2644 aa6.52□□□□□ -1.37
ECHDC1-212ENST00000461239 TRAV24A0A0B4J272 114 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 TRDV1A0A1B0GX56 115 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 NKX6-3A6NJ46 265 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 J3QLI3 93 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 CCRL2O00421 344 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 MAGEB3O15480 346 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 TOMM40O96008 361 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 OCMP0CE72 109 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 IGHV4-38-2P0DP08 117 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 MAPK3P27361 379 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 PSMB9P28065 219 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 OR3A1P47881 315 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 FGF12P61328 243 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 ARF6P62330 175 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 PRB3Q04118 309 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 TWIST1Q15672 202 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 NEDD8Q15843 81 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 PIGYQ3MUY2 71 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 CHRFAM7AQ494W8 412 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 HSD17B12Q53GQ0 312 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 LRRC10Q5BKY1 277 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 C1orf100Q5SVJ3 147 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 GLIPR1L1Q6UWM5 242 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 CENPVQ7Z7K6 275 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 CDH26Q8IXH8 852 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 Q8IYB0 196 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 OR8H3Q8N146 312 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 TMEM104Q8NE00 496 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 TMEM185AQ8NFB2 350 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 OR4M1Q8NGD0 313 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 THAP6Q8TBB0 222 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 PHYHIPQ92561 330 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 GPER1Q99527 375 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 BEX2Q9BXY8 128 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 CHST6Q9GZX3 395 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 OR51E2Q9H255 320 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 RNF167Q9H6Y7 350 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 RHOFQ9HBH0 211 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 NEK6Q9HC98 313 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 ING4Q9UNL4 249 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 AUP1Q9Y679 476 aa6.51□□□□□ -1.37
ECHDC1-212ENST00000461239 MEX3AA1L020 520 aaKnown RBP6.5□□□□□ -1.37
ECHDC1-212ENST00000461239 SIRPB1O00241 398 aa6.5□□□□□ -1.37
ECHDC1-212ENST00000461239 SLC33A1O00400 549 aaPredicted RBP6.5□□□□□ -1.37
ECHDC1-212ENST00000461239 SLC22A1O15245 554 aa6.5□□□□□ -1.37
ECHDC1-212ENST00000461239 ENSAO43768 121 aaKnown RBP6.5□□□□□ -1.37
ECHDC1-212ENST00000461239 GAGE7O76087 117 aa6.5□□□□□ -1.37
ECHDC1-212ENST00000461239 TNFAIP8O95379 198 aa6.5□□□□□ -1.37
ECHDC1-212ENST00000461239 ECDO95905 644 aaPredicted RBP6.5□□□□□ -1.37
ECHDC1-212ENST00000461239 CYB5AP00167 134 aa6.5□□□□□ -1.37
ECHDC1-212ENST00000461239 GAGE12FP0CL80 117 aa6.5□□□□□ -1.37
ECHDC1-212ENST00000461239 GAGE12GP0CL81 117 aa6.5□□□□□ -1.37
ECHDC1-212ENST00000461239 GAGE12IP0CL82 117 aa6.5□□□□□ -1.37
ECHDC1-212ENST00000461239 PPIAL4GP0DN37 164 aa6.5□□□□□ -1.37
ECHDC1-212ENST00000461239 IGHV4-30-4P0DP06 118 aa6.5□□□□□ -1.37
ECHDC1-212ENST00000461239 PSMA1P25786 263 aaKnown RBP6.5□□□□□ -1.37
ECHDC1-212ENST00000461239 DLX6P56179 175 aa6.5□□□□□ -1.37
ECHDC1-212ENST00000461239 QRFPP83859 136 aa6.5□□□□□ -1.37
ECHDC1-212ENST00000461239 GAGE1Q13065 139 aa6.5□□□□□ -1.37
ECHDC1-212ENST00000461239 GAGE4Q13068 117 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms