RNA–Protein interactions for RNA: ENST00000459584.1

SNORD42A-201, Transcript of small nucleolar RNA, C/D box 42A, humanhuman

BASIC

Gene SNORD42A, Length 64 nt, Biotype snoRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42A-201ENST00000459584 TRIP13Q15645 432 aaPredicted RBP0.66□□□□□ -2.3
SNORD42A-201ENST00000459584 MRPL51Q4U2R6 128 aaKnown RBP0.66□□□□□ -2.3
SNORD42A-201ENST00000459584 FAM183BPQ6ZVS7 135 aa0.66□□□□□ -2.3
SNORD42A-201ENST00000459584 SYS1Q8N2H4 156 aa0.66□□□□□ -2.3
SNORD42A-201ENST00000459584 SLC35F6Q8N357 371 aa0.66□□□□□ -2.3
SNORD42A-201ENST00000459584 ZNF283Q8N7M2 679 aa0.66□□□□□ -2.3
SNORD42A-201ENST00000459584 EBNA1BP2Q99848 306 aaKnown RBP0.66□□□□□ -2.3
SNORD42A-201ENST00000459584 C11orf49Q9H6J7 331 aa0.66□□□□□ -2.3
SNORD42A-201ENST00000459584 STMN3Q9NZ72 180 aa0.66□□□□□ -2.3
SNORD42A-201ENST00000459584 DIDO1Q9BTC0 2240 aaKnown RBP0.65□□□□□ -2.3
SNORD42A-201ENST00000459584 KIF27Q86VH2 1401 aa0.65□□□□□ -2.3
SNORD42A-201ENST00000459584 DHRS12A0PJE2 317 aa0.65□□□□□ -2.31
SNORD42A-201ENST00000459584 C11orf86A6NJI1 115 aa0.65□□□□□ -2.31
SNORD42A-201ENST00000459584 A8MUN3 132 aa0.65□□□□□ -2.31
SNORD42A-201ENST00000459584 SNAI1O95863 264 aaPredicted RBP0.65□□□□□ -2.31
SNORD42A-201ENST00000459584 STAG3L2P0CL84 134 aa0.65□□□□□ -2.31
SNORD42A-201ENST00000459584 IGHV3-30-3P0DP02 117 aa0.65□□□□□ -2.31
SNORD42A-201ENST00000459584 SLC25A16P16260 332 aa0.65□□□□□ -2.31
SNORD42A-201ENST00000459584 G6PCP35575 357 aa0.65□□□□□ -2.31
SNORD42A-201ENST00000459584 PPP1CCP36873 323 aaKnown RBP0.65□□□□□ -2.31
SNORD42A-201ENST00000459584 TRAM1Q15629 374 aa0.65□□□□□ -2.31
SNORD42A-201ENST00000459584 FAM201AQ5SY85 155 aa0.65□□□□□ -2.31
SNORD42A-201ENST00000459584 PID1Q7Z2X4 250 aa0.65□□□□□ -2.31
SNORD42A-201ENST00000459584 GLT6D1Q7Z4J2 308 aa0.65□□□□□ -2.31
SNORD42A-201ENST00000459584 PGLYRP3Q96LB9 341 aa0.65□□□□□ -2.31
SNORD42A-201ENST00000459584 MGLLQ99685 303 aa0.65□□□□□ -2.31
SNORD42A-201ENST00000459584 MRPS16Q9Y3D3 137 aaKnown RBP0.65□□□□□ -2.31
SNORD42A-201ENST00000459584 POLEQ07864 2286 aa0.64□□□□□ -2.31
SNORD42A-201ENST00000459584 IGHV3-15A0A0B4J1V0 119 aa0.64□□□□□ -2.31
SNORD42A-201ENST00000459584 hCG_2039718K7EN88 272 aa0.64□□□□□ -2.31
SNORD42A-201ENST00000459584 PSMD11O00231 422 aa0.64□□□□□ -2.31
SNORD42A-201ENST00000459584 UBDO15205 165 aa0.64□□□□□ -2.31
SNORD42A-201ENST00000459584 SHOX2O60902 331 aaPredicted RBP0.64□□□□□ -2.31
SNORD42A-201ENST00000459584 BGNP21810 368 aa0.64□□□□□ -2.31
SNORD42A-201ENST00000459584 RPL14P50914 215 aaKnown RBP0.64□□□□□ -2.31
SNORD42A-201ENST00000459584 RAP1GDS1P52306 607 aa0.64□□□□□ -2.31
SNORD42A-201ENST00000459584 AKR1C2P52895 323 aa0.64□□□□□ -2.31
SNORD42A-201ENST00000459584 FAM162BQ5T6X4 162 aa0.64□□□□□ -2.31
SNORD42A-201ENST00000459584 RASL11AQ6T310 242 aa0.64□□□□□ -2.31
SNORD42A-201ENST00000459584 Q6ZTI0 123 aa0.64□□□□□ -2.31
SNORD42A-201ENST00000459584 NAA40Q86UY6 237 aa0.64□□□□□ -2.31
SNORD42A-201ENST00000459584 OR5D18Q8NGL1 313 aa0.64□□□□□ -2.31
SNORD42A-201ENST00000459584 FGF13Q92913 245 aa0.64□□□□□ -2.31
SNORD42A-201ENST00000459584 GALMQ96C23 342 aa0.64□□□□□ -2.31
SNORD42A-201ENST00000459584 ZNF471Q9BX82 626 aaPredicted RBP0.64□□□□□ -2.31
SNORD42A-201ENST00000459584 C1QTNF6Q9BXI9 259 aa0.64□□□□□ -2.31
SNORD42A-201ENST00000459584 TMBIM4Q9HC24 238 aa0.64□□□□□ -2.31
SNORD42A-201ENST00000459584 RMND1Q9NWS8 449 aa0.64□□□□□ -2.31
SNORD42A-201ENST00000459584 SCML1Q9UN30 329 aa0.64□□□□□ -2.31
SNORD42A-201ENST00000459584 HMCN1Q96RW7 5635 aa0.63□□□□□ -2.31
SNORD42A-201ENST00000459584 TNIKQ9UKE5 1360 aa0.63□□□□□ -2.31
SNORD42A-201ENST00000459584 GNRH2O43555 120 aa0.63□□□□□ -2.31
SNORD42A-201ENST00000459584 CDK14O94921 469 aa0.63□□□□□ -2.31
SNORD42A-201ENST00000459584 VAPBO95292 243 aa0.63□□□□□ -2.31
SNORD42A-201ENST00000459584 EPPINO95925 133 aa0.63□□□□□ -2.31
SNORD42A-201ENST00000459584 CRYGCP07315 174 aa0.63□□□□□ -2.31
SNORD42A-201ENST00000459584 ZNF705DP0CH99 300 aaPredicted RBP0.63□□□□□ -2.31
SNORD42A-201ENST00000459584 ZNF705BP0CI00 300 aaPredicted RBP0.63□□□□□ -2.31
SNORD42A-201ENST00000459584 PRB4P10163 310 aaPredicted RBP0.63□□□□□ -2.31
SNORD42A-201ENST00000459584 DNASE1L1P49184 302 aa0.63□□□□□ -2.31
SNORD42A-201ENST00000459584 SLC35A2P78381 396 aa0.63□□□□□ -2.31
SNORD42A-201ENST00000459584 PDK2Q15119 407 aa0.63□□□□□ -2.31
SNORD42A-201ENST00000459584 MAPK14Q16539 360 aa0.63□□□□□ -2.31
SNORD42A-201ENST00000459584 CAVIN4Q5BKX8 364 aa0.63□□□□□ -2.31
SNORD42A-201ENST00000459584 Q6ZT83 130 aa0.63□□□□□ -2.31
SNORD42A-201ENST00000459584 ZBTB8OSQ8IWT0 167 aa0.63□□□□□ -2.31
SNORD42A-201ENST00000459584 ZNF321PQ8N8H1 164 aa0.63□□□□□ -2.31
SNORD42A-201ENST00000459584 ASCC1Q8N9N2 400 aaKnown RBP0.63□□□□□ -2.31
SNORD42A-201ENST00000459584 OR11L1Q8NGX0 322 aa0.63□□□□□ -2.31
SNORD42A-201ENST00000459584 FAAP24Q9BTP7 215 aa0.63□□□□□ -2.31
SNORD42A-201ENST00000459584 IFT46Q9NQC8 304 aa0.63□□□□□ -2.31
SNORD42A-201ENST00000459584 CUL9Q8IWT3 2517 aa0.63□□□□□ -2.31
SNORD42A-201ENST00000459584 CPAMD8Q8IZJ3 1885 aa0.63□□□□□ -2.31
SNORD42A-201ENST00000459584 H3BPC8 53 aa0.62□□□□□ -2.31
SNORD42A-201ENST00000459584 BOLA2-SMG1P6H3BVE0 249 aa0.62□□□□□ -2.31
SNORD42A-201ENST00000459584 CDIPTO14735 213 aa0.62□□□□□ -2.31
SNORD42A-201ENST00000459584 TPM2P07951 284 aa0.62□□□□□ -2.31
SNORD42A-201ENST00000459584 FBP1P09467 338 aa0.62□□□□□ -2.31
SNORD42A-201ENST00000459584 ESDP10768 282 aa0.62□□□□□ -2.31
SNORD42A-201ENST00000459584 CTSEP14091 401 aa0.62□□□□□ -2.31
SNORD42A-201ENST00000459584 RPA3P35244 121 aaPredicted RBP0.62□□□□□ -2.31
SNORD42A-201ENST00000459584 YIPF7Q8N8F6 280 aa0.62□□□□□ -2.31
SNORD42A-201ENST00000459584 OR13C9Q8NGT0 318 aa0.62□□□□□ -2.31
SNORD42A-201ENST00000459584 LGALS14Q8TCE9 139 aa0.62□□□□□ -2.31
SNORD42A-201ENST00000459584 DTD1Q8TEA8 209 aa0.62□□□□□ -2.31
SNORD42A-201ENST00000459584 OR5P2Q8WZ92 322 aa0.62□□□□□ -2.31
SNORD42A-201ENST00000459584 TBX5Q99593 518 aa0.62□□□□□ -2.31
SNORD42A-201ENST00000459584 CDCA4Q9BXL8 241 aa0.62□□□□□ -2.31
SNORD42A-201ENST00000459584 XKR8Q9H6D3 395 aa0.62□□□□□ -2.31
SNORD42A-201ENST00000459584 PUS1Q9Y606 427 aaKnown RBP eCLIP0.62□□□□□ -2.31
SNORD42A-201ENST00000459584 CHD5Q8TDI0 1954 aa0.62□□□□□ -2.31
SNORD42A-201ENST00000459584 BRWD1Q9NSI6 2320 aa0.62□□□□□ -2.31
SNORD42A-201ENST00000459584 NAV1Q8NEY1 1877 aa0.62□□□□□ -2.31
SNORD42A-201ENST00000459584 ARFGEF3Q5TH69 2177 aa0.62□□□□□ -2.31
SNORD42A-201ENST00000459584 DISP1Q96F81 1524 aa0.61□□□□□ -2.31
SNORD42A-201ENST00000459584 MGAT4DA6NG13 374 aa0.61□□□□□ -2.31
SNORD42A-201ENST00000459584 RFPL4AA6NLU0 287 aa0.61□□□□□ -2.31
SNORD42A-201ENST00000459584 E7EWF7 191 aa0.61□□□□□ -2.31
SNORD42A-201ENST00000459584 RFPL4AL1F8VTS6 287 aa0.61□□□□□ -2.31
SNORD42A-201ENST00000459584 POLR3GO15318 223 aaPredicted RBP0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms