RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 OR2T2Q6IF00 324 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 CPT1CQ8TCG5 803 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 CORO2AQ92828 525 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 OR6C1Q96RD1 312 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 P2RX4Q99571 388 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 MAGT1Q9H0U3 335 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 PROK2Q9HC23 129 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 Q9N2K0 584 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 TAAR3PQ9P1P4 343 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 BDP1A6H8Y1 2624 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 BAHCC1Q9P281 2608 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 PIGBOS1A0A0B4J2F0 54 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 A0A0J9YW62 118 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 ZNF816-ZNF321PA0A0X1KG74 233 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 SLC22A20A6NK97 555 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 H0Y980 276 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 CHST1O43916 411 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 TK1P04183 234 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 WNT2P09544 360 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 ZNF32P17041 273 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 CEBPGP53567 150 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 CLDN15P56746 228 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 ZNF92Q03936 586 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 ZNF154Q13106 437 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 GAMTQ14353 236 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 CALHM1Q8IU99 346 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 ZNF295-AS1Q8N0V1 137 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 GAPTQ8N292 157 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 ZNF611Q8N823 705 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 OR2V1Q8NHB1 315 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 MBD3L1Q8WWY6 194 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 EXTL1Q92935 676 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 SPSB4Q96A44 273 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 CDH20Q9HBT6 801 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 SDF2L1Q9HCN8 221 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 SH2D2AQ9NP31 389 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 P4HTMQ9NXG6 502 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 NCOR1O75376 2440 aa7.27□□□□□ -1.25
VPS50-208ENST00000458707 LOC102723996A0A087X1L8 192 aa7.27□□□□□ -1.25
VPS50-208ENST00000458707 IGKV1D-13A0A0B4J2D9 117 aa7.27□□□□□ -1.25
VPS50-208ENST00000458707 KIAA1324LA8MWY0 1029 aaPredicted RBP7.27□□□□□ -1.25
VPS50-208ENST00000458707 M0R143 59 aa7.27□□□□□ -1.25
VPS50-208ENST00000458707 EREGO14944 169 aa7.27□□□□□ -1.25
VPS50-208ENST00000458707 OR7C1O76099 320 aaPredicted RBP7.27□□□□□ -1.25
VPS50-208ENST00000458707 IGKV1-13P0DP09 117 aa7.27□□□□□ -1.25
VPS50-208ENST00000458707 BCL2P10415 239 aa7.27□□□□□ -1.25
VPS50-208ENST00000458707 PSG4Q00888 419 aa7.27□□□□□ -1.25
VPS50-208ENST00000458707 PMS2P11Q13670 270 aa7.27□□□□□ -1.25
VPS50-208ENST00000458707 HERPUD1Q15011 391 aa7.27□□□□□ -1.25
VPS50-208ENST00000458707 PCOLCEQ15113 449 aa7.27□□□□□ -1.25
VPS50-208ENST00000458707 PDCD1Q15116 288 aa7.27□□□□□ -1.25
VPS50-208ENST00000458707 SPIN3Q5JUX0 258 aa7.27□□□□□ -1.25
VPS50-208ENST00000458707 RAET1LQ5VY80 246 aa7.27□□□□□ -1.25
VPS50-208ENST00000458707 PLCXD3Q63HM9 321 aa7.27□□□□□ -1.25
VPS50-208ENST00000458707 PRSS57Q6UWY2 283 aa7.27□□□□□ -1.25
VPS50-208ENST00000458707 BHLHA15Q7RTS1 189 aaPredicted RBP7.27□□□□□ -1.25
VPS50-208ENST00000458707 SAXO1Q8IYX7 474 aa7.27□□□□□ -1.25
VPS50-208ENST00000458707 TMEM217Q8N7C4 229 aa7.27□□□□□ -1.25
VPS50-208ENST00000458707 OR2D3Q8NGH3 330 aa7.27□□□□□ -1.25
VPS50-208ENST00000458707 RNASEH2CQ8TDP1 164 aaKnown RBP7.27□□□□□ -1.25
VPS50-208ENST00000458707 CLUHP3Q96NS8 147 aa7.27□□□□□ -1.25
VPS50-208ENST00000458707 PSMG3Q9BT73 122 aaPredicted RBP7.27□□□□□ -1.25
VPS50-208ENST00000458707 SRXN1Q9BYN0 137 aa7.27□□□□□ -1.25
VPS50-208ENST00000458707 CTDSP1Q9GZU7 261 aa7.27□□□□□ -1.25
VPS50-208ENST00000458707 RARRES3Q9UL19 164 aa7.27□□□□□ -1.25
VPS50-208ENST00000458707 RNF150Q9ULK6 438 aa7.27□□□□□ -1.25
VPS50-208ENST00000458707 TRIOO75962 3097 aa7.27□□□□□ -1.25
VPS50-208ENST00000458707 ZNF407Q9C0G0 2248 aa7.27□□□□□ -1.25
VPS50-208ENST00000458707 SDK2Q58EX2 2172 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 KIR2DS1A0A191URI9 304 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 VSTM5A8MXK1 200 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 NTF4P34130 210 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 KIR2DS4P43632 304 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 RAC3P60763 192 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 TRA2AQ13595 282 aaKnown RBP eCLIP7.26□□□□□ -1.25
VPS50-208ENST00000458707 KIR2DS1Q14954 304 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 RAB30Q15771 203 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 RNASE8Q8TDE3 154 aaKnown RBP7.26□□□□□ -1.25
VPS50-208ENST00000458707 PIGCQ92535 297 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 NAT6Q93015 286 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 RAB40CQ96S21 281 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 HIST1H2BLQ99880 126 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 ATG101Q9BSB4 218 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 SNHG12Q9BXW3 62 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 OR2H1Q9GZK4 316 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 PITPNC1Q9UKF7 332 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 ARHGAP21Q5T5U3 1957 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 FREM1Q5H8C1 2179 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 CACNA1BQ00975 2339 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 GJE1A6NN92 205 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 ZNF716A6NP11 495 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 C9J4A7 227 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 TNFSF11O14788 317 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 ATXN7O15265 892 aaPredicted RBP7.26□□□□□ -1.25
VPS50-208ENST00000458707 IFNA5P01569 189 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 SCTP09683 121 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 CCL3P10147 92 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 FABP4P15090 132 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 FGF12P61328 243 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 PCBD1P61457 104 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms