RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 NEK7Q8TDX7 302 aa12.51□□□□□ -0.41
GPC1-206ENST00000455111 PRR25Q96S07 402 aa12.51□□□□□ -0.41
GPC1-206ENST00000455111 KCNK15Q9H427 330 aa12.51□□□□□ -0.41
GPC1-206ENST00000455111 PEX16Q9Y5Y5 336 aa12.51□□□□□ -0.41
GPC1-206ENST00000455111 RYR2Q92736 4967 aa12.51□□□□□ -0.41
GPC1-206ENST00000455111 UBE2QL1A1L167 161 aa12.5□□□□□ -0.41
GPC1-206ENST00000455111 IGF1P05019 195 aa12.5□□□□□ -0.41
GPC1-206ENST00000455111 MGMTP16455 207 aa12.5□□□□□ -0.41
GPC1-206ENST00000455111 CD69Q07108 199 aa12.5□□□□□ -0.41
GPC1-206ENST00000455111 ST3GAL4Q11206 333 aa12.5□□□□□ -0.41
GPC1-206ENST00000455111 FAM27D1Q5T7N8 215 aa12.5□□□□□ -0.41
GPC1-206ENST00000455111 JAGN1Q8N5M9 183 aa12.5□□□□□ -0.41
GPC1-206ENST00000455111 FBLIM1Q8WUP2 373 aa12.5□□□□□ -0.41
GPC1-206ENST00000455111 KCTD7Q96MP8 289 aa12.5□□□□□ -0.41
GPC1-206ENST00000455111 MCRIP2Q9BUT9 160 aaKnown RBP12.5□□□□□ -0.41
GPC1-206ENST00000455111 SELENOIQ9C0D9 397 aa12.5□□□□□ -0.41
GPC1-206ENST00000455111 GNB4Q9HAV0 340 aa12.5□□□□□ -0.41
GPC1-206ENST00000455111 TAF9BQ9HBM6 251 aa12.5□□□□□ -0.41
GPC1-206ENST00000455111 PAK1IP1Q9NWT1 392 aaPredicted RBP12.5□□□□□ -0.41
GPC1-206ENST00000455111 ZNF107Q9UII5 783 aaPredicted RBP12.5□□□□□ -0.41
GPC1-206ENST00000455111 TRAPPC2LQ9UL33 140 aa12.5□□□□□ -0.41
GPC1-206ENST00000455111 SACSQ9NZJ4 4579 aa12.49□□□□□ -0.41
GPC1-206ENST00000455111 MCRIP1C9JLW8 97 aa12.49□□□□□ -0.41
GPC1-206ENST00000455111 G3V318 75 aa12.49□□□□□ -0.41
GPC1-206ENST00000455111 ELANEP08246 267 aa12.49□□□□□ -0.41
GPC1-206ENST00000455111 SLC2A2P11168 524 aaPredicted RBP12.49□□□□□ -0.41
GPC1-206ENST00000455111 PPP1CCP36873 323 aaKnown RBP12.49□□□□□ -0.41
GPC1-206ENST00000455111 RAB25P57735 213 aa12.49□□□□□ -0.41
GPC1-206ENST00000455111 DGCR2P98153 550 aa12.49□□□□□ -0.41
GPC1-206ENST00000455111 NDPQ00604 133 aa12.49□□□□□ -0.41
GPC1-206ENST00000455111 AWAT2Q6E213 333 aa12.49□□□□□ -0.41
GPC1-206ENST00000455111 OR10K2Q6IF99 312 aa12.49□□□□□ -0.41
GPC1-206ENST00000455111 CYGBQ8WWM9 190 aa12.49□□□□□ -0.41
GPC1-206ENST00000455111 FAM46BQ96A09 425 aa12.49□□□□□ -0.41
GPC1-206ENST00000455111 S100A13Q99584 98 aa12.49□□□□□ -0.41
GPC1-206ENST00000455111 NABP2Q9BQ15 211 aa12.49□□□□□ -0.41
GPC1-206ENST00000455111 ZNF251Q9BRH9 671 aa12.49□□□□□ -0.41
GPC1-206ENST00000455111 MRPL20Q9BYC9 149 aaKnown RBP12.49□□□□□ -0.41
GPC1-206ENST00000455111 GNG12Q9UBI6 72 aa12.49□□□□□ -0.41
GPC1-206ENST00000455111 ZNF580Q9UK33 172 aa12.49□□□□□ -0.41
GPC1-206ENST00000455111 FBXO7Q9Y3I1 522 aa12.49□□□□□ -0.41
GPC1-206ENST00000455111 TENM3Q9P273 2699 aa12.48□□□□□ -0.41
GPC1-206ENST00000455111 IGHV7-81A0A0B4J1V7 117 aa12.48□□□□□ -0.41
GPC1-206ENST00000455111 LANCL1O43813 399 aa12.48□□□□□ -0.41
GPC1-206ENST00000455111 MYL12AP19105 171 aa12.48□□□□□ -0.41
GPC1-206ENST00000455111 MYF6P23409 242 aa12.48□□□□□ -0.41
GPC1-206ENST00000455111 OR3A3P47888 321 aa12.48□□□□□ -0.41
GPC1-206ENST00000455111 C19orf54Q5BKX5 351 aa12.48□□□□□ -0.41
GPC1-206ENST00000455111 LRRTM1Q86UE6 522 aa12.48□□□□□ -0.41
GPC1-206ENST00000455111 MRPS24Q96EL2 167 aaKnown RBP12.48□□□□□ -0.41
GPC1-206ENST00000455111 RASL11BQ9BPW5 248 aa12.48□□□□□ -0.41
GPC1-206ENST00000455111 SULT4A1Q9BR01 284 aa12.48□□□□□ -0.41
GPC1-206ENST00000455111 PARP12Q9H0J9 701 aaKnown RBP12.48□□□□□ -0.41
GPC1-206ENST00000455111 FKBP14Q9NWM8 211 aa12.48□□□□□ -0.41
GPC1-206ENST00000455111 PSORS1C1Q9UIG5 152 aa12.48□□□□□ -0.41
GPC1-206ENST00000455111 A0A0A6YYD4 124 aa12.47□□□□□ -0.41
GPC1-206ENST00000455111 FAM90A10PA6NDY2 464 aa12.47□□□□□ -0.41
GPC1-206ENST00000455111 FAM90A7PA6NKC0 464 aa12.47□□□□□ -0.41
GPC1-206ENST00000455111 FAM90A23PA8MXZ1 464 aa12.47□□□□□ -0.41
GPC1-206ENST00000455111 I3L521 148 aa12.47□□□□□ -0.41
GPC1-206ENST00000455111 ATP6V0E1O15342 81 aa12.47□□□□□ -0.41
GPC1-206ENST00000455111 SOX15O60248 233 aa12.47□□□□□ -0.41
GPC1-206ENST00000455111 CRTAPO75718 401 aaPredicted RBP12.47□□□□□ -0.41
GPC1-206ENST00000455111 IGLV1-40P01703 118 aa12.47□□□□□ -0.41
GPC1-206ENST00000455111 CELP19835 753 aa12.47□□□□□ -0.41
GPC1-206ENST00000455111 IL3RAP26951 378 aa12.47□□□□□ -0.41
GPC1-206ENST00000455111 SOX6P35712 828 aa12.47□□□□□ -0.41
GPC1-206ENST00000455111 GNB1P62873 340 aa12.47□□□□□ -0.41
GPC1-206ENST00000455111 GPR176Q14439 515 aa12.47□□□□□ -0.41
GPC1-206ENST00000455111 HMGN3Q15651 99 aa12.47□□□□□ -0.41
GPC1-206ENST00000455111 CXorf66Q5JRM2 361 aaPredicted RBP12.47□□□□□ -0.41
GPC1-206ENST00000455111 C6orf183Q5T699 404 aa12.47□□□□□ -0.41
GPC1-206ENST00000455111 UNQ9370/PRO34162Q6UXP9 181 aa12.47□□□□□ -0.41
GPC1-206ENST00000455111 ZNF833PQ6ZTB9 187 aa12.47□□□□□ -0.41
GPC1-206ENST00000455111 CDH26Q8IXH8 852 aa12.47□□□□□ -0.41
GPC1-206ENST00000455111 OR8H1Q8NGG4 311 aa12.47□□□□□ -0.41
GPC1-206ENST00000455111 OR8U1Q8NH10 309 aa12.47□□□□□ -0.41
GPC1-206ENST00000455111 C4orf3Q8WVX3 66 aa12.47□□□□□ -0.41
GPC1-206ENST00000455111 DPF1Q92782 380 aa12.47□□□□□ -0.41
GPC1-206ENST00000455111 WWC2-AS2Q96NR7 200 aa12.47□□□□□ -0.41
GPC1-206ENST00000455111 NICN1Q9BSH3 213 aa12.47□□□□□ -0.41
GPC1-206ENST00000455111 GPR61Q9BZJ8 451 aa12.47□□□□□ -0.41
GPC1-206ENST00000455111 IFI27L2Q9H2X8 130 aa12.47□□□□□ -0.41
GPC1-206ENST00000455111 SPACA1Q9HBV2 294 aa12.47□□□□□ -0.41
GPC1-206ENST00000455111 OR2S2Q9NQN1 319 aa12.47□□□□□ -0.41
GPC1-206ENST00000455111 WSB1Q9Y6I7 421 aa12.47□□□□□ -0.41
GPC1-206ENST00000455111 IRGMA1A4Y4 181 aa12.46□□□□□ -0.41
GPC1-206ENST00000455111 EFCAB10A6NFE3 127 aa12.46□□□□□ -0.41
GPC1-206ENST00000455111 SPINT2O43291 252 aa12.46□□□□□ -0.41
GPC1-206ENST00000455111 TXNL1O43396 289 aa12.46□□□□□ -0.41
GPC1-206ENST00000455111 PDCD6O75340 191 aa12.46□□□□□ -0.41
GPC1-206ENST00000455111 CD1AP06126 327 aa12.46□□□□□ -0.41
GPC1-206ENST00000455111 FUT3P21217 361 aa12.46□□□□□ -0.41
GPC1-206ENST00000455111 CHATP28329 748 aa12.46□□□□□ -0.41
GPC1-206ENST00000455111 ACTBP60709 375 aa12.46□□□□□ -0.41
GPC1-206ENST00000455111 UNC119Q13432 240 aa12.46□□□□□ -0.41
GPC1-206ENST00000455111 TTC23Q5W5X9 447 aa12.46□□□□□ -0.41
GPC1-206ENST00000455111 STX19Q8N4C7 294 aa12.46□□□□□ -0.41
GPC1-206ENST00000455111 NANOGP1Q8N7R0 232 aa12.46□□□□□ -0.41
GPC1-206ENST00000455111 ZNF491Q8N8L2 437 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms