RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 CHATP28329 748 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 SNU13P55769 128 aaKnown RBP13.42□□□□□ -0.26
SNX17-204ENST00000453453 TMEM33P57088 247 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 MZT1Q08AG7 82 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 MIDNQ504T8 468 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 FAM222BQ8WU58 562 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 MRPL24Q96A35 216 aaKnown RBP13.42□□□□□ -0.26
SNX17-204ENST00000453453 YPEL4Q96NS1 127 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 SYT3Q9BQG1 590 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 SPACA1Q9HBV2 294 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 PLA2G2EQ9NZK7 142 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 CRIM1Q9NZV1 1036 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 TMED3Q9Y3Q3 217 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 IGLV3-9A0A075B6K5 115 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 A0A1W2PPH5 198 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 BTBD17A6NE02 478 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 ZNF732B4DXR9 585 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 SFTPBP07988 381 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 SNRNP70P08621 437 aaKnown RBP13.42□□□□□ -0.26
SNX17-204ENST00000453453 HOXB5P09067 269 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 HOXA5P20719 270 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 OR3A4PP47883 348 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 SULT1A1P50225 295 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 GPM6AP51674 278 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 SSTP61278 116 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 GNG3P63215 75 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 IL13RA2Q14627 380 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 CLINT1Q14677 625 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 ALKBH6Q3KRA9 238 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 LRTM2Q8N967 370 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 HPSE2Q8WWQ2 592 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 ARHGAP5-AS1Q96IT6 56 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 C19orf12Q9NSK7 152 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 TREM2Q9NZC2 230 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 GSKIPQ9P0R6 139 aa13.42□□□□□ -0.26
SNX17-204ENST00000453453 SPTBN1Q01082 2364 aaKnown RBP13.41□□□□□ -0.26
SNX17-204ENST00000453453 A0A087WWC5 75 aa13.41□□□□□ -0.26
SNX17-204ENST00000453453 A0A1W2PPE3 182 aa13.41□□□□□ -0.26
SNX17-204ENST00000453453 SHISA9B4DS77 424 aa13.41□□□□□ -0.26
SNX17-204ENST00000453453 UMAD1C9J7I0 102 aa13.41□□□□□ -0.26
SNX17-204ENST00000453453 M0R036 132 aa13.41□□□□□ -0.26
SNX17-204ENST00000453453 TMEM225BP0DP42 221 aa13.41□□□□□ -0.26
SNX17-204ENST00000453453 CHRFAM7AQ494W8 412 aa13.41□□□□□ -0.26
SNX17-204ENST00000453453 ZNF573Q86YE8 665 aa13.41□□□□□ -0.26
SNX17-204ENST00000453453 TMEM104Q8NE00 496 aa13.41□□□□□ -0.26
SNX17-204ENST00000453453 OR5D18Q8NGL1 313 aa13.41□□□□□ -0.26
SNX17-204ENST00000453453 MRPL37Q9BZE1 423 aaKnown RBP13.41□□□□□ -0.26
SNX17-204ENST00000453453 PLK3Q9H4B4 646 aa13.41□□□□□ -0.26
SNX17-204ENST00000453453 TAAR3PQ9P1P4 343 aa13.41□□□□□ -0.26
SNX17-204ENST00000453453 TMEM210A6NLX4 147 aa13.4□□□□□ -0.26
SNX17-204ENST00000453453 DEFB108AA8MXU0 73 aa13.4□□□□□ -0.26
SNX17-204ENST00000453453 OR4A8P0C604 315 aa13.4□□□□□ -0.26
SNX17-204ENST00000453453 GLRA1P23415 457 aa13.4□□□□□ -0.26
SNX17-204ENST00000453453 CAMLGP49069 296 aa13.4□□□□□ -0.26
SNX17-204ENST00000453453 MSMPQ1L6U9 139 aa13.4□□□□□ -0.26
SNX17-204ENST00000453453 KRBOX4Q5JUW0 171 aa13.4□□□□□ -0.26
SNX17-204ENST00000453453 LRP11Q86VZ4 500 aa13.4□□□□□ -0.26
SNX17-204ENST00000453453 FAM219AQ8IW50 185 aa13.4□□□□□ -0.26
SNX17-204ENST00000453453 DMRTC2Q8IXT2 367 aaPredicted RBP13.4□□□□□ -0.26
SNX17-204ENST00000453453 GALNT14Q96FL9 552 aa13.4□□□□□ -0.26
SNX17-204ENST00000453453 PECRQ9BY49 303 aa13.4□□□□□ -0.26
SNX17-204ENST00000453453 TOLLIPQ9H0E2 274 aa13.4□□□□□ -0.26
SNX17-204ENST00000453453 CXXC4Q9H2H0 198 aa13.4□□□□□ -0.26
SNX17-204ENST00000453453 ELL3Q9HB65 397 aaPredicted RBP13.4□□□□□ -0.26
SNX17-204ENST00000453453 IGKV1-27A0A075B6S5 117 aa13.39□□□□□ -0.27
SNX17-204ENST00000453453 AGPAT2O15120 278 aa13.39□□□□□ -0.27
SNX17-204ENST00000453453 CRTAPO75718 401 aaPredicted RBP13.39□□□□□ -0.27
SNX17-204ENST00000453453 HAAOP46952 286 aa13.39□□□□□ -0.27
SNX17-204ENST00000453453 RSU1Q15404 277 aa13.39□□□□□ -0.27
SNX17-204ENST00000453453 ADIPOQQ15848 244 aa13.39□□□□□ -0.27
SNX17-204ENST00000453453 GGNBP1Q5YKI7 109 aa13.39□□□□□ -0.27
SNX17-204ENST00000453453 HEPN1Q6WQI6 88 aa13.39□□□□□ -0.27
SNX17-204ENST00000453453 EDARADDQ8WWZ3 215 aa13.39□□□□□ -0.27
SNX17-204ENST00000453453 SUCNR1Q9BXA5 334 aa13.39□□□□□ -0.27
SNX17-204ENST00000453453 METTL9Q9H1A3 318 aa13.39□□□□□ -0.27
SNX17-204ENST00000453453 SMG1Q96Q15 3661 aaKnown RBP13.39□□□□□ -0.27
SNX17-204ENST00000453453 PLCE1Q9P212 2302 aa13.39□□□□□ -0.27
SNX17-204ENST00000453453 LRP5LA4QPB2 252 aa13.39□□□□□ -0.27
SNX17-204ENST00000453453 H7C1Q1 480 aa13.39□□□□□ -0.27
SNX17-204ENST00000453453 TGOLN2O43493 480 aa13.39□□□□□ -0.27
SNX17-204ENST00000453453 APOBEC3AP31941 199 aaPredicted RBP13.39□□□□□ -0.27
SNX17-204ENST00000453453 CDX1P47902 265 aaPredicted RBP13.39□□□□□ -0.27
SNX17-204ENST00000453453 MEX3BQ6ZN04 569 aaKnown RBP13.39□□□□□ -0.27
SNX17-204ENST00000453453 RNF144BQ7Z419 303 aa13.39□□□□□ -0.27
SNX17-204ENST00000453453 MKXQ8IYA7 352 aa13.39□□□□□ -0.27
SNX17-204ENST00000453453 ZNF611Q8N823 705 aa13.39□□□□□ -0.27
SNX17-204ENST00000453453 ZNF565Q8N9K5 539 aa13.39□□□□□ -0.27
SNX17-204ENST00000453453 OR10AD1Q8NGE0 317 aa13.39□□□□□ -0.27
SNX17-204ENST00000453453 OR51T1Q8NGJ9 327 aa13.39□□□□□ -0.27
SNX17-204ENST00000453453 MSL2Q9HCI7 577 aa13.39□□□□□ -0.27
SNX17-204ENST00000453453 RALYQ9UKM9 306 aaKnown RBP13.39□□□□□ -0.27
SNX17-204ENST00000453453 KCNIP3Q9Y2W7 256 aa13.39□□□□□ -0.27
SNX17-204ENST00000453453 CXorf65A6NEN9 183 aa13.38□□□□□ -0.27
SNX17-204ENST00000453453 E7EQL1 145 aa13.38□□□□□ -0.27
SNX17-204ENST00000453453 C19orf84I3L1E1 186 aa13.38□□□□□ -0.27
SNX17-204ENST00000453453 MLNRO43193 412 aa13.38□□□□□ -0.27
SNX17-204ENST00000453453 SIAH2O43255 324 aa13.38□□□□□ -0.27
SNX17-204ENST00000453453 TXNL1O43396 289 aa13.38□□□□□ -0.27
SNX17-204ENST00000453453 SPRY1O43609 319 aaPredicted RBP13.38□□□□□ -0.27
SNX17-204ENST00000453453 NQO2P16083 231 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms