RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 Q9N2K0 584 aa11.57□□□□□ -0.56
COL3A1-203ENST00000450867 SPATA2Q9UM82 520 aa11.57□□□□□ -0.56
COL3A1-203ENST00000450867 TCF19Q9Y242 345 aa11.57□□□□□ -0.56
COL3A1-203ENST00000450867 HILPDAQ9Y5L2 63 aa11.57□□□□□ -0.56
COL3A1-203ENST00000450867 MMP24Q9Y5R2 645 aa11.57□□□□□ -0.56
COL3A1-203ENST00000450867 A0A0A6YYH2 397 aa11.56□□□□□ -0.56
COL3A1-203ENST00000450867 A6NJ64 397 aa11.56□□□□□ -0.56
COL3A1-203ENST00000450867 DIRAS3O95661 229 aa11.56□□□□□ -0.56
COL3A1-203ENST00000450867 RELBQ01201 579 aa11.56□□□□□ -0.56
COL3A1-203ENST00000450867 FOXL1Q12952 345 aa11.56□□□□□ -0.56
COL3A1-203ENST00000450867 MADCAM1Q13477 382 aa11.56□□□□□ -0.56
COL3A1-203ENST00000450867 SRSF7Q16629 238 aaKnown RBP eCLIP11.56□□□□□ -0.56
COL3A1-203ENST00000450867 LTC4SQ16873 150 aa11.56□□□□□ -0.56
COL3A1-203ENST00000450867 IDNKQ5T6J7 187 aa11.56□□□□□ -0.56
COL3A1-203ENST00000450867 CCDC144NLQ6NUI1 221 aa11.56□□□□□ -0.56
COL3A1-203ENST00000450867 Q6ZS49 121 aa11.56□□□□□ -0.56
COL3A1-203ENST00000450867 OR5H6Q8NGV6 325 aa11.56□□□□□ -0.56
COL3A1-203ENST00000450867 GCDHQ92947 438 aaPredicted RBP11.56□□□□□ -0.56
COL3A1-203ENST00000450867 ST6GALNAC6Q969X2 333 aa11.56□□□□□ -0.56
COL3A1-203ENST00000450867 GALMQ96C23 342 aa11.56□□□□□ -0.56
COL3A1-203ENST00000450867 KCTD12Q96CX2 325 aaKnown RBP11.56□□□□□ -0.56
COL3A1-203ENST00000450867 CMSS1Q9BQ75 279 aaKnown RBP11.56□□□□□ -0.56
COL3A1-203ENST00000450867 ATG5Q9H1Y0 275 aa11.56□□□□□ -0.56
COL3A1-203ENST00000450867 C1RLQ9NZP8 487 aa11.56□□□□□ -0.56
COL3A1-203ENST00000450867 IGHV3-43A0A0B4J1X8 118 aa11.55□□□□□ -0.56
COL3A1-203ENST00000450867 A0A1W2PPI3 338 aa11.55□□□□□ -0.56
COL3A1-203ENST00000450867 A6NDX4 124 aa11.55□□□□□ -0.56
COL3A1-203ENST00000450867 YPEL1O60688 119 aa11.55□□□□□ -0.56
COL3A1-203ENST00000450867 GSTP1P09211 210 aaKnown RBP11.55□□□□□ -0.56
COL3A1-203ENST00000450867 CD3GP09693 182 aa11.55□□□□□ -0.56
COL3A1-203ENST00000450867 IGHV3-43DP0DP04 118 aa11.55□□□□□ -0.56
COL3A1-203ENST00000450867 RAB7AP51149 207 aa11.55□□□□□ -0.56
COL3A1-203ENST00000450867 ARHGDIBP52566 201 aa11.55□□□□□ -0.56
COL3A1-203ENST00000450867 VBP1P61758 197 aa11.55□□□□□ -0.56
COL3A1-203ENST00000450867 HLA-DRB3P79483 266 aa11.55□□□□□ -0.56
COL3A1-203ENST00000450867 ZNF816Q0VGE8 651 aaPredicted RBP11.55□□□□□ -0.56
COL3A1-203ENST00000450867 HABP2Q14520 560 aaPredicted RBP11.55□□□□□ -0.56
COL3A1-203ENST00000450867 MORN2Q502X0 79 aa11.55□□□□□ -0.56
COL3A1-203ENST00000450867 FAM53AQ6NSI3 398 aaPredicted RBP11.55□□□□□ -0.56
COL3A1-203ENST00000450867 GPR141Q7Z602 305 aa11.55□□□□□ -0.56
COL3A1-203ENST00000450867 OR8H3Q8N146 312 aa11.55□□□□□ -0.56
COL3A1-203ENST00000450867 YPEL2Q96QA6 119 aa11.55□□□□□ -0.56
COL3A1-203ENST00000450867 NAA50Q9GZZ1 169 aaKnown RBP11.55□□□□□ -0.56
COL3A1-203ENST00000450867 ABCG5Q9H222 651 aa11.55□□□□□ -0.56
COL3A1-203ENST00000450867 CHMP1AQ9HD42 196 aaPredicted RBP11.55□□□□□ -0.56
COL3A1-203ENST00000450867 RAB18Q9NP72 206 aa11.55□□□□□ -0.56
COL3A1-203ENST00000450867 ABCB10Q9NRK6 738 aa11.55□□□□□ -0.56
COL3A1-203ENST00000450867 TNFRSF19Q9NS68 423 aa11.55□□□□□ -0.56
COL3A1-203ENST00000450867 GNG12Q9UBI6 72 aa11.55□□□□□ -0.56
COL3A1-203ENST00000450867 PITPNC1Q9UKF7 332 aa11.55□□□□□ -0.56
COL3A1-203ENST00000450867 A0A1B0GUS0 222 aa11.54□□□□□ -0.56
COL3A1-203ENST00000450867 FAM90A9PA6NNJ1 464 aa11.54□□□□□ -0.56
COL3A1-203ENST00000450867 ITGB1BP1O14713 200 aa11.54□□□□□ -0.56
COL3A1-203ENST00000450867 TSPAN9O75954 239 aa11.54□□□□□ -0.56
COL3A1-203ENST00000450867 RGS11O94810 467 aa11.54□□□□□ -0.56
COL3A1-203ENST00000450867 IGHV3-7P01780 117 aa11.54□□□□□ -0.56
COL3A1-203ENST00000450867 FCGR3AP08637 254 aa11.54□□□□□ -0.56
COL3A1-203ENST00000450867 GNB3P16520 340 aa11.54□□□□□ -0.56
COL3A1-203ENST00000450867 DTYMKP23919 212 aa11.54□□□□□ -0.56
COL3A1-203ENST00000450867 BRS3P32247 399 aa11.54□□□□□ -0.56
COL3A1-203ENST00000450867 RPL5P46777 297 aaKnown RBP11.54□□□□□ -0.56
COL3A1-203ENST00000450867 SERPINB10P48595 397 aa11.54□□□□□ -0.56
COL3A1-203ENST00000450867 GNG10P50151 68 aa11.54□□□□□ -0.56
COL3A1-203ENST00000450867 ZNF134P52741 427 aa11.54□□□□□ -0.56
COL3A1-203ENST00000450867 GNMTQ14749 295 aa11.54□□□□□ -0.56
COL3A1-203ENST00000450867 AWAT1Q58HT5 328 aa11.54□□□□□ -0.56
COL3A1-203ENST00000450867 CT45A1Q5HYN5 189 aa11.54□□□□□ -0.56
COL3A1-203ENST00000450867 CCBE1Q6UXH8 406 aaPredicted RBP11.54□□□□□ -0.56
COL3A1-203ENST00000450867 C5orf24Q7Z6I8 188 aa11.54□□□□□ -0.56
COL3A1-203ENST00000450867 PRR18Q8N4B5 295 aa11.54□□□□□ -0.56
COL3A1-203ENST00000450867 OR10X1Q8NGY0 326 aa11.54□□□□□ -0.56
COL3A1-203ENST00000450867 CT45A3Q8NHU0 189 aa11.54□□□□□ -0.56
COL3A1-203ENST00000450867 CFHR4Q92496 578 aa11.54□□□□□ -0.56
COL3A1-203ENST00000450867 TOMM40LQ969M1 308 aa11.54□□□□□ -0.56
COL3A1-203ENST00000450867 RPEQ96AT9 228 aa11.54□□□□□ -0.56
COL3A1-203ENST00000450867 BCL7BQ9BQE9 202 aa11.54□□□□□ -0.56
COL3A1-203ENST00000450867 TOLLIPQ9H0E2 274 aa11.54□□□□□ -0.56
COL3A1-203ENST00000450867 C16orf95Q9H693 158 aa11.54□□□□□ -0.56
COL3A1-203ENST00000450867 RANBP3Q9H6Z4 567 aaPredicted RBP11.54□□□□□ -0.56
COL3A1-203ENST00000450867 OR2S2Q9NQN1 319 aa11.54□□□□□ -0.56
COL3A1-203ENST00000450867 A0A1W2PPE3 182 aa11.53□□□□□ -0.56
COL3A1-203ENST00000450867 TRDCB7Z8K6 153 aa11.53□□□□□ -0.56
COL3A1-203ENST00000450867 HSD17B6O14756 317 aa11.53□□□□□ -0.56
COL3A1-203ENST00000450867 SLC31A2O15432 143 aa11.53□□□□□ -0.56
COL3A1-203ENST00000450867 CHST1O43916 411 aa11.53□□□□□ -0.56
COL3A1-203ENST00000450867 CRYBA1P05813 215 aa11.53□□□□□ -0.56
COL3A1-203ENST00000450867 IL3RAP26951 378 aa11.53□□□□□ -0.56
COL3A1-203ENST00000450867 PPP1CCP36873 323 aaKnown RBP11.53□□□□□ -0.56
COL3A1-203ENST00000450867 MNDAP41218 407 aa11.53□□□□□ -0.56
COL3A1-203ENST00000450867 RAB13P51153 203 aa11.53□□□□□ -0.56
COL3A1-203ENST00000450867 RAG2P55895 527 aa11.53□□□□□ -0.56
COL3A1-203ENST00000450867 PNLIPRP3Q17RR3 467 aa11.53□□□□□ -0.56
COL3A1-203ENST00000450867 ZNF260Q3ZCT1 412 aa11.53□□□□□ -0.56
COL3A1-203ENST00000450867 CDNFQ49AH0 187 aa11.53□□□□□ -0.56
COL3A1-203ENST00000450867 PLA1AQ53H76 456 aa11.53□□□□□ -0.56
COL3A1-203ENST00000450867 GPR107Q5VW38 600 aa11.53□□□□□ -0.56
COL3A1-203ENST00000450867 HACD4Q5VWC8 232 aa11.53□□□□□ -0.56
COL3A1-203ENST00000450867 DHRS7BQ6IAN0 325 aaPredicted RBP11.53□□□□□ -0.56
COL3A1-203ENST00000450867 THNSL2Q86YJ6 484 aa11.53□□□□□ -0.56
COL3A1-203ENST00000450867 OR52L2PQ8NGH6 319 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms