RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 C3orf85A0A1B0GTC6 90 aa11.85□□□□□ -0.51
USP39-207ENST00000450066 HSD17B6O14756 317 aa11.85□□□□□ -0.51
USP39-207ENST00000450066 TMPRSS2O15393 492 aa11.85□□□□□ -0.51
USP39-207ENST00000450066 ADAP1O75689 374 aa11.85□□□□□ -0.51
USP39-207ENST00000450066 PRB1P04280 392 aa11.85□□□□□ -0.51
USP39-207ENST00000450066 FGL1Q08830 312 aa11.85□□□□□ -0.51
USP39-207ENST00000450066 HFEQ30201 348 aa11.85□□□□□ -0.51
USP39-207ENST00000450066 SP6Q3SY56 376 aa11.85□□□□□ -0.51
USP39-207ENST00000450066 KIAA2026Q5HYC2 2103 aa11.85□□□□□ -0.51
USP39-207ENST00000450066 TBC1D26Q86UD7 250 aa11.85□□□□□ -0.51
USP39-207ENST00000450066 LRTM2Q8N967 370 aa11.85□□□□□ -0.51
USP39-207ENST00000450066 NINJ1Q92982 152 aa11.85□□□□□ -0.51
USP39-207ENST00000450066 SEC22AQ96IW7 307 aa11.85□□□□□ -0.51
USP39-207ENST00000450066 BOLA1Q9Y3E2 137 aa11.85□□□□□ -0.51
USP39-207ENST00000450066 TANC2Q9HCD6 1990 aa11.85□□□□□ -0.51
USP39-207ENST00000450066 C13orf42A0A1B0GVH6 325 aa11.85□□□□□ -0.51
USP39-207ENST00000450066 C5orf51A6NDU8 294 aa11.85□□□□□ -0.51
USP39-207ENST00000450066 TNFRSF13BO14836 293 aaPredicted RBP11.85□□□□□ -0.51
USP39-207ENST00000450066 S100GP29377 79 aa11.85□□□□□ -0.51
USP39-207ENST00000450066 CYCSP99999 105 aaKnown RBP11.85□□□□□ -0.51
USP39-207ENST00000450066 C11orf71Q6IPW1 123 aa11.85□□□□□ -0.51
USP39-207ENST00000450066 LIAT1Q6ZQX7 453 aa11.85□□□□□ -0.51
USP39-207ENST00000450066 OR52L2PQ8NGH6 319 aa11.85□□□□□ -0.51
USP39-207ENST00000450066 GLYATL2Q8WU03 294 aa11.85□□□□□ -0.51
USP39-207ENST00000450066 AKR1E2Q96JD6 320 aa11.85□□□□□ -0.51
USP39-207ENST00000450066 PARP12Q9H0J9 701 aaKnown RBP11.85□□□□□ -0.51
USP39-207ENST00000450066 METTL8Q9H825 291 aaKnown RBP11.85□□□□□ -0.51
USP39-207ENST00000450066 OR2S2Q9NQN1 319 aa11.85□□□□□ -0.51
USP39-207ENST00000450066 PLSCR3Q9NRY6 295 aa11.85□□□□□ -0.51
USP39-207ENST00000450066 HSPB11Q9Y547 144 aa11.85□□□□□ -0.51
USP39-207ENST00000450066 PHF1O43189 567 aaPredicted RBP11.84□□□□□ -0.51
USP39-207ENST00000450066 PGLYRP1O75594 196 aaPredicted RBP11.84□□□□□ -0.51
USP39-207ENST00000450066 SNAPC5O75971 98 aa11.84□□□□□ -0.51
USP39-207ENST00000450066 ZNF843Q8N446 348 aa11.84□□□□□ -0.51
USP39-207ENST00000450066 GRPEL2Q8TAA5 225 aa11.84□□□□□ -0.51
USP39-207ENST00000450066 RFESDQ8TAC1 157 aa11.84□□□□□ -0.51
USP39-207ENST00000450066 MSI2Q96DH6 328 aaKnown RBP11.84□□□□□ -0.51
USP39-207ENST00000450066 TP53RKQ96S44 253 aa11.84□□□□□ -0.51
USP39-207ENST00000450066 NMES1Q9C002 83 aa11.84□□□□□ -0.51
USP39-207ENST00000450066 TMEM222Q9H0R3 208 aa11.84□□□□□ -0.51
USP39-207ENST00000450066 RAB1BQ9H0U4 201 aa11.84□□□□□ -0.51
USP39-207ENST00000450066 RBM7Q9Y580 266 aaKnown RBP11.84□□□□□ -0.51
USP39-207ENST00000450066 MYO18BQ8IUG5 2567 aa11.84□□□□□ -0.51
USP39-207ENST00000450066 RAI1Q7Z5J4 1906 aaPredicted RBP11.83□□□□□ -0.51
USP39-207ENST00000450066 NDUFA2O43678 99 aa11.83□□□□□ -0.51
USP39-207ENST00000450066 FSTL3O95633 263 aa11.83□□□□□ -0.51
USP39-207ENST00000450066 IGLV2-14P01704 120 aa11.83□□□□□ -0.51
USP39-207ENST00000450066 OR8U9P0C7N5 309 aa11.83□□□□□ -0.51
USP39-207ENST00000450066 DANCRP0C864 163 aa11.83□□□□□ -0.51
USP39-207ENST00000450066 CGB3P0DN86 165 aa11.83□□□□□ -0.51
USP39-207ENST00000450066 CGB7P0DN87 165 aa11.83□□□□□ -0.51
USP39-207ENST00000450066 SRPXP78539 464 aa11.83□□□□□ -0.51
USP39-207ENST00000450066 DTX2Q86UW9 622 aa11.83□□□□□ -0.51
USP39-207ENST00000450066 LGI3Q8N145 548 aa11.83□□□□□ -0.51
USP39-207ENST00000450066 ZBTB8BQ8NAP8 495 aaPredicted RBP11.83□□□□□ -0.51
USP39-207ENST00000450066 OR8U1Q8NH10 309 aa11.83□□□□□ -0.51
USP39-207ENST00000450066 RAB9BQ9NP90 201 aa11.83□□□□□ -0.51
USP39-207ENST00000450066 DCHS2Q6V1P9 2916 aa11.83□□□□□ -0.52
USP39-207ENST00000450066 TRGV10A0A0A0MS01 117 aa11.83□□□□□ -0.52
USP39-207ENST00000450066 MEX3AA1L020 520 aaKnown RBP11.83□□□□□ -0.52
USP39-207ENST00000450066 HMSDA8MTL9 139 aa11.83□□□□□ -0.52
USP39-207ENST00000450066 F2RL2O00254 374 aa11.83□□□□□ -0.52
USP39-207ENST00000450066 SOD3P08294 240 aa11.83□□□□□ -0.52
USP39-207ENST00000450066 HOXB5P09067 269 aa11.83□□□□□ -0.52
USP39-207ENST00000450066 WNT2P09544 360 aa11.83□□□□□ -0.52
USP39-207ENST00000450066 GNMTQ14749 295 aa11.83□□□□□ -0.52
USP39-207ENST00000450066 PPP1R1CQ8WVI7 109 aa11.83□□□□□ -0.52
USP39-207ENST00000450066 COMMD9Q9P000 198 aa11.83□□□□□ -0.52
USP39-207ENST00000450066 KAAG1Q9UBP8 84 aa11.83□□□□□ -0.52
USP39-207ENST00000450066 SLC25A10Q9UBX3 287 aaPredicted RBP11.83□□□□□ -0.52
USP39-207ENST00000450066 ZNF462Q96JM2 2506 aa11.83□□□□□ -0.52
USP39-207ENST00000450066 DOPEY1Q5JWR5 2465 aa11.83□□□□□ -0.52
USP39-207ENST00000450066 TRAV14DV4A0A0A6YYC5 116 aa11.82□□□□□ -0.52
USP39-207ENST00000450066 A0A1W2PPR1 153 aa11.82□□□□□ -0.52
USP39-207ENST00000450066 B3GALNT1O75752 331 aa11.82□□□□□ -0.52
USP39-207ENST00000450066 IFNA21P01568 189 aa11.82□□□□□ -0.52
USP39-207ENST00000450066 PPP1CCP36873 323 aaKnown RBP11.82□□□□□ -0.52
USP39-207ENST00000450066 FAM216AQ8WUB2 273 aa11.82□□□□□ -0.52
USP39-207ENST00000450066 CORO2AQ92828 525 aa11.82□□□□□ -0.52
USP39-207ENST00000450066 C18orf12Q96KH6 178 aa11.82□□□□□ -0.52
USP39-207ENST00000450066 OR10C1Q96KK4 312 aa11.82□□□□□ -0.52
USP39-207ENST00000450066 TMEM56Q96MV1 263 aa11.82□□□□□ -0.52
USP39-207ENST00000450066 TMEM246Q9BRR3 403 aa11.82□□□□□ -0.52
USP39-207ENST00000450066 CALYQ9NYX4 217 aa11.82□□□□□ -0.52
USP39-207ENST00000450066 JPT1Q9UK76 154 aa11.82□□□□□ -0.52
USP39-207ENST00000450066 TMEM56-RWDD3S4R434 201 aa11.82□□□□□ -0.52
USP39-207ENST00000450066 COL12A1Q99715 3063 aa11.82□□□□□ -0.52
USP39-207ENST00000450066 KBTBD11-OT1A0A1B0GTJ5 212 aa11.82□□□□□ -0.52
USP39-207ENST00000450066 MPTX1A8MV57 137 aa11.82□□□□□ -0.52
USP39-207ENST00000450066 H0Y980 276 aa11.82□□□□□ -0.52
USP39-207ENST00000450066 COL8A2P25067 703 aa11.82□□□□□ -0.52
USP39-207ENST00000450066 F2RP25116 425 aa11.82□□□□□ -0.52
USP39-207ENST00000450066 LGALSLQ3ZCW2 172 aaPredicted RBP11.82□□□□□ -0.52
USP39-207ENST00000450066 ZNF645Q8N7E2 425 aa11.82□□□□□ -0.52
USP39-207ENST00000450066 C2orf50Q96LR7 162 aa11.82□□□□□ -0.52
USP39-207ENST00000450066 LINC00574Q9H8X3 128 aa11.82□□□□□ -0.52
USP39-207ENST00000450066 CLN8Q9UBY8 286 aa11.82□□□□□ -0.52
USP39-207ENST00000450066 KCNS2Q9ULS6 477 aa11.82□□□□□ -0.52
USP39-207ENST00000450066 UBE2J1Q9Y385 318 aaPredicted RBP11.82□□□□□ -0.52
USP39-207ENST00000450066 USP9XQ93008 2570 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms