RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 TMEM267Q0VDI3 215 aaPredicted RBP4.44□□□□□ -1.7
USP49-205ENST00000448078 TSPAN31Q12999 210 aa4.44□□□□□ -1.7
USP49-205ENST00000448078 KLHL12Q53G59 568 aa4.44□□□□□ -1.7
USP49-205ENST00000448078 PRAMEF5Q5TYX0 476 aa4.44□□□□□ -1.7
USP49-205ENST00000448078 KRT74Q7RTS7 529 aa4.44□□□□□ -1.7
USP49-205ENST00000448078 HPSE2Q8WWQ2 592 aa4.44□□□□□ -1.7
USP49-205ENST00000448078 RGP1Q92546 391 aaPredicted RBP4.44□□□□□ -1.7
USP49-205ENST00000448078 EMG1Q92979 244 aaKnown RBP4.44□□□□□ -1.7
USP49-205ENST00000448078 ST6GAL2Q96JF0 529 aa4.44□□□□□ -1.7
USP49-205ENST00000448078 KCTD7Q96MP8 289 aa4.44□□□□□ -1.7
USP49-205ENST00000448078 OR5B12Q96R08 314 aa4.44□□□□□ -1.7
USP49-205ENST00000448078 SCPEP1Q9HB40 452 aa4.44□□□□□ -1.7
USP49-205ENST00000448078 NEK6Q9HC98 313 aa4.44□□□□□ -1.7
USP49-205ENST00000448078 AASSQ9UDR5 926 aa4.44□□□□□ -1.7
USP49-205ENST00000448078 HYDINQ4G0P3 5121 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 LY6LH3BQJ8 138 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 J3QR06 171 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 ZNF737O75373 536 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 ZNF254O75437 659 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 GATBO75879 557 aaKnown RBP4.43□□□□□ -1.7
USP49-205ENST00000448078 TPPPO94811 219 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 MOSP00540 346 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 HSPB1P04792 205 aaKnown RBP4.43□□□□□ -1.7
USP49-205ENST00000448078 IGF1P05019 195 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 CLEC3BP05452 202 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 SPI1P17947 270 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 ZP3P21754 424 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 PSMB8P28062 276 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 RAB9AP51151 201 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 MFGE8Q08431 387 aaPredicted RBP4.43□□□□□ -1.7
USP49-205ENST00000448078 ZNF829Q3KNS6 432 aaPredicted RBP4.43□□□□□ -1.7
USP49-205ENST00000448078 SPIN3Q5JUX0 258 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 LCN12Q6JVE5 192 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 FAHD1Q6P587 224 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 DEGS2Q6QHC5 323 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 ANGPTL5Q86XS5 388 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 RDH10Q8IZV5 341 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 FAM58AQ8N1B3 248 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 ZNF491Q8N8L2 437 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 SLC37A3Q8NCC5 494 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 OR2T33Q8NG76 320 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 OR10V1Q8NGI7 309 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 DLX4Q92988 240 aaPredicted RBP4.43□□□□□ -1.7
USP49-205ENST00000448078 HOPXQ9BPY8 73 aaPredicted RBP4.43□□□□□ -1.7
USP49-205ENST00000448078 EBF4Q9BQW3 602 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 SIKE1Q9BRV8 207 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 CHST6Q9GZX3 395 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 SLC25A19Q9HC21 320 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 HES4Q9HCC6 221 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 EXOSC4Q9NPD3 245 aaKnown RBP4.43□□□□□ -1.7
USP49-205ENST00000448078 GPR84Q9NQS5 396 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 SLC2A8Q9NY64 477 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 ZNF319Q9P2F9 582 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 LAMP5Q9UJQ1 280 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 RNF150Q9ULK6 438 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 SAMD4AQ9UPU9 718 aaKnown RBP4.43□□□□□ -1.7
USP49-205ENST00000448078 TMEM14AQ9Y6G1 99 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 DNAH7Q8WXX0 4024 aa4.43□□□□□ -1.7
USP49-205ENST00000448078 A0A087X0M5 115 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 TRBV4-1A0A0J9YWV2 114 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 KBTBD11-OT1A0A1B0GTJ5 212 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 A0A1B0GX30 115 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 PQLC2LA1A4F0 135 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 C15orf62A8K5M9 175 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 I3L521 148 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 DHRS3O75911 302 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 GYPBP06028 91 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 MPZP25189 248 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 CD1BP29016 333 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 ATP1B3P54709 279 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 LINC01547P58512 204 aaPredicted RBP4.42□□□□□ -1.7
USP49-205ENST00000448078 FXYD6P3P58550 94 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 MAGOHP61326 146 aaKnown RBP4.42□□□□□ -1.7
USP49-205ENST00000448078 ERVK11-1P61568 191 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 LIPEQ05469 1076 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 SCN1BQ07699 218 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 GAGE5Q13069 117 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 GAGE6Q13070 117 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 APOFQ13790 326 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 EBI3Q14213 229 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 KRBOX4Q5JUW0 171 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 LGALS9CQ6DKI2 356 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 PYHIN1Q6K0P9 492 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 CEMP1Q6PRD7 247 aaPredicted RBP4.42□□□□□ -1.7
USP49-205ENST00000448078 LINC00336Q6ZUF6 198 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 GBGT1Q8N5D6 347 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 TPRX1Q8N7U7 411 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 CHST4Q8NCG5 386 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 CCDC54Q8NEL0 328 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 OR10A7Q8NGE5 316 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 OR8B12Q8NGG6 310 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 OTOSQ8NHW6 89 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 OR51E1Q8TCB6 317 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 ASB17Q8WXJ9 295 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 ARPC1AQ92747 370 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 BORCS8Q96FH0 119 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 S1PR3Q99500 378 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 TSSK6Q9BXA6 273 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 PBOV1Q9GZY1 135 aa4.42□□□□□ -1.7
USP49-205ENST00000448078 OR51V1Q9H2C8 321 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms