RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 NEBP20929 6669 aa4.3□□□□□ -1.72
BRAFP1-201ENST00000445336 IGHV3-72A0A0B4J1Y9 119 aa4.3□□□□□ -1.72
BRAFP1-201ENST00000445336 H7C1C5 153 aa4.3□□□□□ -1.72
BRAFP1-201ENST00000445336 K7EMT4 169 aa4.3□□□□□ -1.72
BRAFP1-201ENST00000445336 PIAS1O75925 651 aa4.3□□□□□ -1.72
BRAFP1-201ENST00000445336 HSD11B1P28845 292 aa4.3□□□□□ -1.72
BRAFP1-201ENST00000445336 MC5RP33032 325 aa4.3□□□□□ -1.72
BRAFP1-201ENST00000445336 LCN6P62502 163 aa4.3□□□□□ -1.72
BRAFP1-201ENST00000445336 KRBOX4Q5JUW0 171 aa4.3□□□□□ -1.72
BRAFP1-201ENST00000445336 CSNK1G2-AS1Q8NCQ2 148 aa4.3□□□□□ -1.72
BRAFP1-201ENST00000445336 LFNGQ8NES3 379 aa4.3□□□□□ -1.72
BRAFP1-201ENST00000445336 OR6T1Q8NGN1 323 aa4.3□□□□□ -1.72
BRAFP1-201ENST00000445336 CHAC1Q9BUX1 264 aa4.3□□□□□ -1.72
BRAFP1-201ENST00000445336 ZNF230Q9UIE0 474 aaPredicted RBP4.3□□□□□ -1.72
BRAFP1-201ENST00000445336 BOLA1Q9Y3E2 137 aa4.3□□□□□ -1.72
BRAFP1-201ENST00000445336 TRAV9-2A0A087WT02 112 aa4.29□□□□□ -1.72
BRAFP1-201ENST00000445336 TRBV5-7A0A0A0MS05 114 aa4.29□□□□□ -1.72
BRAFP1-201ENST00000445336 FAM25EA8MYX2 175 aa4.29□□□□□ -1.72
BRAFP1-201ENST00000445336 ORC5O43913 435 aa4.29□□□□□ -1.72
BRAFP1-201ENST00000445336 TRBV12-3P01733 135 aa4.29□□□□□ -1.72
BRAFP1-201ENST00000445336 GNB3P16520 340 aa4.29□□□□□ -1.72
BRAFP1-201ENST00000445336 HNRNPA3P51991 378 aaKnown RBP4.29□□□□□ -1.72
BRAFP1-201ENST00000445336 BNIP1Q12981 228 aa4.29□□□□□ -1.72
BRAFP1-201ENST00000445336 HSP90B2PQ58FF3 399 aa4.29□□□□□ -1.72
BRAFP1-201ENST00000445336 ZNF529Q6P280 563 aa4.29□□□□□ -1.72
BRAFP1-201ENST00000445336 MOB3CQ70IA8 216 aa4.29□□□□□ -1.72
BRAFP1-201ENST00000445336 OR5B3Q8NH48 314 aa4.29□□□□□ -1.72
BRAFP1-201ENST00000445336 FAM81AQ8TBF8 368 aa4.29□□□□□ -1.72
BRAFP1-201ENST00000445336 RAB40CQ96S21 281 aa4.29□□□□□ -1.72
BRAFP1-201ENST00000445336 TSNAXQ99598 290 aaKnown RBP4.29□□□□□ -1.72
BRAFP1-201ENST00000445336 NEK6Q9HC98 313 aa4.29□□□□□ -1.72
BRAFP1-201ENST00000445336 GFOD1Q9NXC2 390 aa4.29□□□□□ -1.72
BRAFP1-201ENST00000445336 OR5H14A6NHG9 310 aa4.29□□□□□ -1.72
BRAFP1-201ENST00000445336 APOL3O95236 402 aa4.29□□□□□ -1.72
BRAFP1-201ENST00000445336 IGLV3-1P01715 115 aa4.29□□□□□ -1.72
BRAFP1-201ENST00000445336 ST3GAL3Q11203 375 aa4.29□□□□□ -1.72
BRAFP1-201ENST00000445336 SSX7Q7RTT5 188 aa4.29□□□□□ -1.72
BRAFP1-201ENST00000445336 SCXQ7RTU7 201 aa4.29□□□□□ -1.72
BRAFP1-201ENST00000445336 TRPT1Q86TN4 253 aaKnown RBP4.29□□□□□ -1.72
BRAFP1-201ENST00000445336 ZBTB8BQ8NAP8 495 aaPredicted RBP4.29□□□□□ -1.72
BRAFP1-201ENST00000445336 DNAAF1Q8NEP3 725 aa4.29□□□□□ -1.72
BRAFP1-201ENST00000445336 RNF133Q8WVZ7 376 aa4.29□□□□□ -1.72
BRAFP1-201ENST00000445336 ZNF436Q9C0F3 470 aaPredicted RBP4.29□□□□□ -1.72
BRAFP1-201ENST00000445336 ANKRD19PQ9H560 264 aa4.29□□□□□ -1.72
BRAFP1-201ENST00000445336 ZNF586Q9NXT0 402 aa4.29□□□□□ -1.72
BRAFP1-201ENST00000445336 OR2T8A6NH00 312 aa4.28□□□□□ -1.72
BRAFP1-201ENST00000445336 CCSO14618 274 aa4.28□□□□□ -1.72
BRAFP1-201ENST00000445336 ENTPD6O75354 484 aa4.28□□□□□ -1.72
BRAFP1-201ENST00000445336 S1PR2O95136 353 aa4.28□□□□□ -1.72
BRAFP1-201ENST00000445336 NRASP01111 189 aa4.28□□□□□ -1.72
BRAFP1-201ENST00000445336 SLC2A2P11168 524 aaPredicted RBP4.28□□□□□ -1.72
BRAFP1-201ENST00000445336 TMED1Q13445 227 aa4.28□□□□□ -1.72
BRAFP1-201ENST00000445336 MED21Q13503 144 aa4.28□□□□□ -1.72
BRAFP1-201ENST00000445336 EPS8L3Q8TE67 593 aaKnown RBP4.28□□□□□ -1.72
BRAFP1-201ENST00000445336 SCARB1Q8WTV0 552 aa4.28□□□□□ -1.72
BRAFP1-201ENST00000445336 RSRC1Q96IZ7 334 aaKnown RBP4.28□□□□□ -1.72
BRAFP1-201ENST00000445336 GHRLQ9UBU3 117 aa4.28□□□□□ -1.72
BRAFP1-201ENST00000445336 TNFRSF18Q9Y5U5 241 aa4.28□□□□□ -1.72
BRAFP1-201ENST00000445336 DYNC1I1O14576 645 aa4.28□□□□□ -1.72
BRAFP1-201ENST00000445336 GSC2O15499 205 aa4.28□□□□□ -1.72
BRAFP1-201ENST00000445336 IFI30P13284 250 aa4.28□□□□□ -1.72
BRAFP1-201ENST00000445336 PRKXP51817 358 aa4.28□□□□□ -1.72
BRAFP1-201ENST00000445336 ZNF121P58317 390 aaPredicted RBP4.28□□□□□ -1.72
BRAFP1-201ENST00000445336 SCARB2Q14108 478 aa4.28□□□□□ -1.72
BRAFP1-201ENST00000445336 ZSCAN26Q16670 478 aa4.28□□□□□ -1.72
BRAFP1-201ENST00000445336 MEP1BQ16820 701 aa4.28□□□□□ -1.72
BRAFP1-201ENST00000445336 ANKRD39Q53RE8 183 aa4.28□□□□□ -1.72
BRAFP1-201ENST00000445336 ARHGAP24Q8N264 748 aa4.28□□□□□ -1.72
BRAFP1-201ENST00000445336 PRSS35Q8N3Z0 413 aa4.28□□□□□ -1.72
BRAFP1-201ENST00000445336 TXLNGYQ9BZA5 131 aa4.28□□□□□ -1.72
BRAFP1-201ENST00000445336 MRPL22Q9NWU5 206 aaKnown RBP4.28□□□□□ -1.72
BRAFP1-201ENST00000445336 GMPPBQ9Y5P6 360 aa4.28□□□□□ -1.72
BRAFP1-201ENST00000445336 TRAV5A0A0B4J249 113 aa4.27□□□□□ -1.73
BRAFP1-201ENST00000445336 OR9G9P0C7N8 305 aa4.27□□□□□ -1.73
BRAFP1-201ENST00000445336 CDKN2CP42773 168 aa4.27□□□□□ -1.73
BRAFP1-201ENST00000445336 TAS2R41P59536 307 aa4.27□□□□□ -1.73
BRAFP1-201ENST00000445336 SMUG1Q53HV7 270 aa4.27□□□□□ -1.73
BRAFP1-201ENST00000445336 FAM57BQ71RH2 274 aa4.27□□□□□ -1.73
BRAFP1-201ENST00000445336 BCDIN3DQ7Z5W3 292 aaKnown RBP4.27□□□□□ -1.73
BRAFP1-201ENST00000445336 FAM58AQ8N1B3 248 aa4.27□□□□□ -1.73
BRAFP1-201ENST00000445336 TPRX1Q8N7U7 411 aa4.27□□□□□ -1.73
BRAFP1-201ENST00000445336 KCNG3Q8TAE7 436 aa4.27□□□□□ -1.73
BRAFP1-201ENST00000445336 SUN5Q8TC36 379 aa4.27□□□□□ -1.73
BRAFP1-201ENST00000445336 TMEM37Q8WXS4 190 aa4.27□□□□□ -1.73
BRAFP1-201ENST00000445336 COQ2Q96H96 371 aa4.27□□□□□ -1.73
BRAFP1-201ENST00000445336 SORT1Q99523 831 aa4.27□□□□□ -1.73
BRAFP1-201ENST00000445336 TSPYL1Q9H0U9 437 aa4.27□□□□□ -1.73
BRAFP1-201ENST00000445336 ANP32DO95626 131 aa4.27□□□□□ -1.73
BRAFP1-201ENST00000445336 HNRNPCP07910 306 aaKnown RBP eCLIP4.27□□□□□ -1.73
BRAFP1-201ENST00000445336 GIG44P09565 113 aaPredicted RBP4.27□□□□□ -1.73
BRAFP1-201ENST00000445336 PAFAH1B2P68402 229 aa4.27□□□□□ -1.73
BRAFP1-201ENST00000445336 TRAT1Q6PIZ9 186 aa4.27□□□□□ -1.73
BRAFP1-201ENST00000445336 DCXRQ7Z4W1 244 aa4.27□□□□□ -1.73
BRAFP1-201ENST00000445336 TPRA1Q86W33 373 aa4.27□□□□□ -1.73
BRAFP1-201ENST00000445336 OR51T1Q8NGJ9 327 aa4.27□□□□□ -1.73
BRAFP1-201ENST00000445336 RPRD1BQ9NQG5 326 aaKnown RBP4.27□□□□□ -1.73
BRAFP1-201ENST00000445336 CDH10Q9Y6N8 788 aa4.27□□□□□ -1.73
BRAFP1-201ENST00000445336 U3KQV3 271 aa4.27□□□□□ -1.73
BRAFP1-201ENST00000445336 LYRM9A8MSI8 78 aa4.26□□□□□ -1.73
BRAFP1-201ENST00000445336 J3KTA2 159 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms