RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 MARCH1Q8TCQ1 289 aa11.19□□□□□ -0.62
ACTN4-204ENST00000440400 ABHD17AQ96GS6 310 aa11.19□□□□□ -0.62
ACTN4-204ENST00000440400 ELL3Q9HB65 397 aaPredicted RBP11.19□□□□□ -0.62
ACTN4-204ENST00000440400 MYO7BQ6PIF6 2116 aa11.18□□□□□ -0.62
ACTN4-204ENST00000440400 MED19A0JLT2 244 aaPredicted RBP11.18□□□□□ -0.62
ACTN4-204ENST00000440400 OPRM1P35372 400 aa11.18□□□□□ -0.62
ACTN4-204ENST00000440400 RAB4BP61018 213 aa11.18□□□□□ -0.62
ACTN4-204ENST00000440400 PSG7Q13046 419 aa11.18□□□□□ -0.62
ACTN4-204ENST00000440400 OR2T2Q6IF00 324 aa11.18□□□□□ -0.62
ACTN4-204ENST00000440400 Q6P435 159 aa11.18□□□□□ -0.62
ACTN4-204ENST00000440400 Q8IYB0 196 aa11.18□□□□□ -0.62
ACTN4-204ENST00000440400 SLC25A40Q8TBP6 338 aa11.18□□□□□ -0.62
ACTN4-204ENST00000440400 HS3ST6Q96QI5 342 aa11.18□□□□□ -0.62
ACTN4-204ENST00000440400 ST6GALNAC5Q9BVH7 336 aa11.18□□□□□ -0.62
ACTN4-204ENST00000440400 OR2J1Q9GZK6 312 aa11.18□□□□□ -0.62
ACTN4-204ENST00000440400 NCOR1P1Q9H4R4 102 aa11.18□□□□□ -0.62
ACTN4-204ENST00000440400 NECAP2Q9NVZ3 263 aa11.18□□□□□ -0.62
ACTN4-204ENST00000440400 TUBD1Q9UJT1 453 aa11.18□□□□□ -0.62
ACTN4-204ENST00000440400 ATMQ13315 3056 aa11.18□□□□□ -0.62
ACTN4-204ENST00000440400 IGHV2OR16-5A0A0B4J2B6 119 aa11.18□□□□□ -0.62
ACTN4-204ENST00000440400 ZNF727A8MUV8 499 aa11.18□□□□□ -0.62
ACTN4-204ENST00000440400 CTSDP07339 412 aaPredicted RBP11.18□□□□□ -0.62
ACTN4-204ENST00000440400 GLI4P10075 376 aa11.18□□□□□ -0.62
ACTN4-204ENST00000440400 IDH3GP51553 393 aaPredicted RBP11.18□□□□□ -0.62
ACTN4-204ENST00000440400 NHLH2Q02577 135 aa11.18□□□□□ -0.62
ACTN4-204ENST00000440400 KLF14Q8TD94 323 aaPredicted RBP11.18□□□□□ -0.62
ACTN4-204ENST00000440400 LIME1Q9H400 295 aa11.18□□□□□ -0.62
ACTN4-204ENST00000440400 COL12A1Q99715 3063 aa11.18□□□□□ -0.62
ACTN4-204ENST00000440400 AKAP13Q12802 2813 aa11.18□□□□□ -0.62
ACTN4-204ENST00000440400 SYNGR1O43759 233 aa11.18□□□□□ -0.62
ACTN4-204ENST00000440400 GFRA3O60609 400 aa11.18□□□□□ -0.62
ACTN4-204ENST00000440400 HOXC12P31275 282 aa11.18□□□□□ -0.62
ACTN4-204ENST00000440400 CHRFAM7AQ494W8 412 aa11.18□□□□□ -0.62
ACTN4-204ENST00000440400 ZNF343Q6P1L6 599 aa11.18□□□□□ -0.62
ACTN4-204ENST00000440400 FAM180AQ6UWF9 173 aa11.18□□□□□ -0.62
ACTN4-204ENST00000440400 HIST1H2AAQ96QV6 131 aa11.18□□□□□ -0.62
ACTN4-204ENST00000440400 Q9N2K0 584 aa11.18□□□□□ -0.62
ACTN4-204ENST00000440400 EHFQ9NZC4 300 aa11.18□□□□□ -0.62
ACTN4-204ENST00000440400 IGF2RP11717 2491 aa11.17□□□□□ -0.62
ACTN4-204ENST00000440400 DNAJC13O75165 2243 aa11.17□□□□□ -0.62
ACTN4-204ENST00000440400 TRAPPC2LH3BP13 241 aa11.17□□□□□ -0.62
ACTN4-204ENST00000440400 NPSP0C0P6 89 aa11.17□□□□□ -0.62
ACTN4-204ENST00000440400 PGA5P0DJD9 388 aa11.17□□□□□ -0.62
ACTN4-204ENST00000440400 C4orf17Q53FE4 359 aa11.17□□□□□ -0.62
ACTN4-204ENST00000440400 OR8G5Q8NG78 346 aa11.17□□□□□ -0.62
ACTN4-204ENST00000440400 EIF5A2Q9GZV4 153 aaKnown RBP11.17□□□□□ -0.62
ACTN4-204ENST00000440400 PRR13Q9NZ81 148 aa11.17□□□□□ -0.62
ACTN4-204ENST00000440400 KCNIP3Q9Y2W7 256 aa11.17□□□□□ -0.62
ACTN4-204ENST00000440400 NUDT19A8MXV4 375 aa11.17□□□□□ -0.62
ACTN4-204ENST00000440400 FAM157AC9JC47 383 aa11.17□□□□□ -0.62
ACTN4-204ENST00000440400 PPP1R2P9O14990 202 aa11.17□□□□□ -0.62
ACTN4-204ENST00000440400 OR2C1O95371 312 aa11.17□□□□□ -0.62
ACTN4-204ENST00000440400 AKR1C4P17516 323 aa11.17□□□□□ -0.62
ACTN4-204ENST00000440400 MPV17P39210 176 aa11.17□□□□□ -0.62
ACTN4-204ENST00000440400 Q6ZRG5 221 aa11.17□□□□□ -0.62
ACTN4-204ENST00000440400 PHB2Q99623 299 aa11.17□□□□□ -0.62
ACTN4-204ENST00000440400 PUS1Q9Y606 427 aaKnown RBP eCLIP11.17□□□□□ -0.62
ACTN4-204ENST00000440400 KPTNQ9Y664 436 aa11.17□□□□□ -0.62
ACTN4-204ENST00000440400 OR13C7P0DN81 318 aa11.16□□□□□ -0.62
ACTN4-204ENST00000440400 LYL1P12980 280 aa11.16□□□□□ -0.62
ACTN4-204ENST00000440400 SPINK2P20155 84 aa11.16□□□□□ -0.62
ACTN4-204ENST00000440400 CA6P23280 308 aa11.16□□□□□ -0.62
ACTN4-204ENST00000440400 PSMB6P28072 239 aa11.16□□□□□ -0.62
ACTN4-204ENST00000440400 ERVS71-1P61550 626 aa11.16□□□□□ -0.62
ACTN4-204ENST00000440400 ZNF146Q15072 292 aa11.16□□□□□ -0.62
ACTN4-204ENST00000440400 PRR18Q8N4B5 295 aa11.16□□□□□ -0.62
ACTN4-204ENST00000440400 BSCL2Q96G97 398 aaPredicted RBP11.16□□□□□ -0.62
ACTN4-204ENST00000440400 DSPP15924 2871 aaKnown RBP11.16□□□□□ -0.62
ACTN4-204ENST00000440400 NPIPB11E5RHQ5 1161 aa11.16□□□□□ -0.62
ACTN4-204ENST00000440400 H0YIZ8 118 aa11.16□□□□□ -0.62
ACTN4-204ENST00000440400 IFNA10P01566 189 aa11.16□□□□□ -0.62
ACTN4-204ENST00000440400 WNT2P09544 360 aa11.16□□□□□ -0.62
ACTN4-204ENST00000440400 DVL1P1P54792 670 aaPredicted RBP11.16□□□□□ -0.62
ACTN4-204ENST00000440400 IL13RA1P78552 427 aa11.16□□□□□ -0.62
ACTN4-204ENST00000440400 RPL7L1Q6DKI1 246 aaKnown RBP11.16□□□□□ -0.62
ACTN4-204ENST00000440400 C11orf53Q8IXP5 236 aa11.16□□□□□ -0.62
ACTN4-204ENST00000440400 RPRMLQ8N4K4 120 aa11.16□□□□□ -0.62
ACTN4-204ENST00000440400 POC1AQ8NBT0 407 aa11.16□□□□□ -0.62
ACTN4-204ENST00000440400 OR1J1Q8NGS3 322 aa11.16□□□□□ -0.62
ACTN4-204ENST00000440400 MOB3AQ96BX8 217 aa11.16□□□□□ -0.62
ACTN4-204ENST00000440400 RAB18Q9NP72 206 aa11.16□□□□□ -0.62
ACTN4-204ENST00000440400 TEX13DA0A0J9YY54 714 aaPredicted RBP11.16□□□□□ -0.62
ACTN4-204ENST00000440400 CRYM-AS1A6NIL9 109 aa11.16□□□□□ -0.62
ACTN4-204ENST00000440400 A6NNC1 897 aa11.16□□□□□ -0.62
ACTN4-204ENST00000440400 UMAD1C9J7I0 102 aa11.16□□□□□ -0.62
ACTN4-204ENST00000440400 DIRAS3O95661 229 aa11.16□□□□□ -0.62
ACTN4-204ENST00000440400 CEBPGP53567 150 aa11.16□□□□□ -0.62
ACTN4-204ENST00000440400 UCNP55089 124 aa11.16□□□□□ -0.62
ACTN4-204ENST00000440400 NKX6-1P78426 367 aaPredicted RBP11.16□□□□□ -0.62
ACTN4-204ENST00000440400 EXTL1Q92935 676 aa11.16□□□□□ -0.62
ACTN4-204ENST00000440400 NMES1Q9C002 83 aa11.16□□□□□ -0.62
ACTN4-204ENST00000440400 ZNF286AQ9HBT8 521 aa11.16□□□□□ -0.62
ACTN4-204ENST00000440400 POLDIP2Q9Y2S7 368 aa11.16□□□□□ -0.62
ACTN4-204ENST00000440400 TRBV6-7A0A0A0MS04 114 aa11.15□□□□□ -0.62
ACTN4-204ENST00000440400 TRAV24A0A0B4J272 114 aa11.15□□□□□ -0.62
ACTN4-204ENST00000440400 ZNF705GA8MUZ8 300 aaPredicted RBP11.15□□□□□ -0.62
ACTN4-204ENST00000440400 MLNRO43193 412 aa11.15□□□□□ -0.62
ACTN4-204ENST00000440400 AGFG2O95081 481 aa11.15□□□□□ -0.62
ACTN4-204ENST00000440400 IL2RGP31785 369 aa11.15□□□□□ -0.62
ACTN4-204ENST00000440400 SERPINF1P36955 418 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms