RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 HAPLN4Q86UW8 402 aa15.85■□□□□ 0.13
TRIM39-210ENST00000440271 SGPP2Q8IWX5 399 aa15.85■□□□□ 0.13
TRIM39-210ENST00000440271 CASTOR1Q8WTX7 329 aa15.85■□□□□ 0.13
TRIM39-210ENST00000440271 MRPL48Q96GC5 212 aaKnown RBP15.85■□□□□ 0.13
TRIM39-210ENST00000440271 SPATA25Q9BR10 227 aa15.85■□□□□ 0.13
TRIM39-210ENST00000440271 TAS2R4Q9NYW5 299 aa15.85■□□□□ 0.13
TRIM39-210ENST00000440271 EXOGQ9Y2C4 368 aaKnown RBP15.85■□□□□ 0.13
TRIM39-210ENST00000440271 A0A1W2PN81 502 aa15.84■□□□□ 0.13
TRIM39-210ENST00000440271 E9PI62 339 aa15.84■□□□□ 0.13
TRIM39-210ENST00000440271 NBR2O15453 112 aa15.84■□□□□ 0.13
TRIM39-210ENST00000440271 HSPA12AO43301 675 aa15.84■□□□□ 0.13
TRIM39-210ENST00000440271 CHRNA7P36544 502 aa15.84■□□□□ 0.13
TRIM39-210ENST00000440271 ECSCRQ19T08 205 aa15.84■□□□□ 0.13
TRIM39-210ENST00000440271 C5orf64Q2M2E5 130 aa15.84■□□□□ 0.13
TRIM39-210ENST00000440271 MPV17LQ2QL34 196 aa15.84■□□□□ 0.13
TRIM39-210ENST00000440271 TMEM30BQ3MIR4 351 aa15.84■□□□□ 0.13
TRIM39-210ENST00000440271 C19orf54Q5BKX5 351 aa15.84■□□□□ 0.13
TRIM39-210ENST00000440271 SLC25A30Q5SVS4 291 aa15.84■□□□□ 0.13
TRIM39-210ENST00000440271 SYT6Q5T7P8 510 aaPredicted RBP15.84■□□□□ 0.13
TRIM39-210ENST00000440271 SYS1Q8N2H4 156 aa15.84■□□□□ 0.13
TRIM39-210ENST00000440271 PRR18Q8N4B5 295 aa15.84■□□□□ 0.13
TRIM39-210ENST00000440271 STX19Q8N4C7 294 aa15.84■□□□□ 0.13
TRIM39-210ENST00000440271 ALG8Q9BVK2 526 aa15.84■□□□□ 0.13
TRIM39-210ENST00000440271 RAB9BQ9NP90 201 aa15.84■□□□□ 0.13
TRIM39-210ENST00000440271 IMPAD1Q9NX62 359 aa15.84■□□□□ 0.13
TRIM39-210ENST00000440271 TRAPPC2LQ9UL33 140 aa15.84■□□□□ 0.13
TRIM39-210ENST00000440271 ERGIC3Q9Y282 383 aa15.84■□□□□ 0.13
TRIM39-210ENST00000440271 HBZP02008 142 aa15.83■□□□□ 0.12
TRIM39-210ENST00000440271 HSPB1P04792 205 aaKnown RBP15.83■□□□□ 0.12
TRIM39-210ENST00000440271 SERPINA2P20848 420 aa15.83■□□□□ 0.12
TRIM39-210ENST00000440271 SOX2P48431 317 aa15.83■□□□□ 0.12
TRIM39-210ENST00000440271 NPBQ8NG41 125 aa15.83■□□□□ 0.12
TRIM39-210ENST00000440271 OR1L1Q8NH94 360 aa15.83■□□□□ 0.12
TRIM39-210ENST00000440271 FLYWCH2Q96CP2 140 aaKnown RBP15.83■□□□□ 0.12
TRIM39-210ENST00000440271 LGALS12Q96DT0 336 aa15.83■□□□□ 0.12
TRIM39-210ENST00000440271 FBXO7Q9Y3I1 522 aa15.83■□□□□ 0.12
TRIM39-210ENST00000440271 IGLV1-51P01701 117 aa15.82■□□□□ 0.12
TRIM39-210ENST00000440271 HAGHQ16775 308 aa15.82■□□□□ 0.12
TRIM39-210ENST00000440271 MEDAGQ5VYS4 303 aa15.82■□□□□ 0.12
TRIM39-210ENST00000440271 OR4K15Q8NH41 348 aa15.82■□□□□ 0.12
TRIM39-210ENST00000440271 MYCBPQ99417 103 aaPredicted RBP15.82■□□□□ 0.12
TRIM39-210ENST00000440271 S100A13Q99584 98 aa15.82■□□□□ 0.12
TRIM39-210ENST00000440271 ELOVL1Q9BW60 279 aa15.82■□□□□ 0.12
TRIM39-210ENST00000440271 JAM3Q9BX67 310 aa15.82■□□□□ 0.12
TRIM39-210ENST00000440271 MRPL20Q9BYC9 149 aaKnown RBP15.82■□□□□ 0.12
TRIM39-210ENST00000440271 CST11Q9H112 138 aa15.82■□□□□ 0.12
TRIM39-210ENST00000440271 STUB1Q9UNE7 303 aa15.82■□□□□ 0.12
TRIM39-210ENST00000440271 FOXA2Q9Y261 457 aaPredicted RBP15.82■□□□□ 0.12
TRIM39-210ENST00000440271 AP4S1Q9Y587 144 aa15.82■□□□□ 0.12
TRIM39-210ENST00000440271 IGHV3-11P01762 117 aa15.81■□□□□ 0.12
TRIM39-210ENST00000440271 IFNA6P05013 189 aa15.81■□□□□ 0.12
TRIM39-210ENST00000440271 ZNF93P35789 620 aaPredicted RBP15.81■□□□□ 0.12
TRIM39-210ENST00000440271 CRIP2P52943 208 aaPredicted RBP15.81■□□□□ 0.12
TRIM39-210ENST00000440271 SNRPGP62308 76 aaKnown RBP15.81■□□□□ 0.12
TRIM39-210ENST00000440271 NDPQ00604 133 aa15.81■□□□□ 0.12
TRIM39-210ENST00000440271 MRPL28Q13084 256 aaKnown RBP15.81■□□□□ 0.12
TRIM39-210ENST00000440271 MORN2Q502X0 79 aa15.81■□□□□ 0.12
TRIM39-210ENST00000440271 C6orf183Q5T699 404 aa15.81■□□□□ 0.12
TRIM39-210ENST00000440271 SLC7A6OSQ96CW6 309 aaPredicted RBP15.81■□□□□ 0.12
TRIM39-210ENST00000440271 NABP2Q9BQ15 211 aa15.81■□□□□ 0.12
TRIM39-210ENST00000440271 OR2S2Q9NQN1 319 aa15.81■□□□□ 0.12
TRIM39-210ENST00000440271 PAK1IP1Q9NWT1 392 aaPredicted RBP15.81■□□□□ 0.12
TRIM39-210ENST00000440271 PLECQ15149 4684 aaKnown RBP15.8■□□□□ 0.12
TRIM39-210ENST00000440271 A0A1W2PP11 408 aa15.8■□□□□ 0.12
TRIM39-210ENST00000440271 MCRIP1C9JLW8 97 aa15.8■□□□□ 0.12
TRIM39-210ENST00000440271 NDUFA3O95167 84 aa15.8■□□□□ 0.12
TRIM39-210ENST00000440271 ARSBP15848 533 aa15.8■□□□□ 0.12
TRIM39-210ENST00000440271 ADARB1P78563 741 aaKnown RBP15.8■□□□□ 0.12
TRIM39-210ENST00000440271 ZNF660Q6AZW8 331 aaPredicted RBP15.8■□□□□ 0.12
TRIM39-210ENST00000440271 ANKRD13BQ86YJ7 626 aa15.8■□□□□ 0.12
TRIM39-210ENST00000440271 ODF3L1Q8IXM7 274 aa15.8■□□□□ 0.12
TRIM39-210ENST00000440271 TCTEX1D1Q8N7M0 179 aa15.8■□□□□ 0.12
TRIM39-210ENST00000440271 RGP1Q92546 391 aaPredicted RBP15.8■□□□□ 0.12
TRIM39-210ENST00000440271 RSRP1Q9BUV0 290 aa15.8■□□□□ 0.12
TRIM39-210ENST00000440271 TMEM138Q9NPI0 162 aa15.8■□□□□ 0.12
TRIM39-210ENST00000440271 ETAA1Q9NY74 926 aa15.8■□□□□ 0.12
TRIM39-210ENST00000440271 KIAA1456Q9P272 454 aa15.8■□□□□ 0.12
TRIM39-210ENST00000440271 OAZ3Q9UMX2 235 aa15.8■□□□□ 0.12
TRIM39-210ENST00000440271 NUBP2Q9Y5Y2 271 aa15.8■□□□□ 0.12
TRIM39-210ENST00000440271 SNTNA6NMZ2 147 aa15.79■□□□□ 0.12
TRIM39-210ENST00000440271 ARPC1BO15143 372 aaKnown RBP15.79■□□□□ 0.12
TRIM39-210ENST00000440271 ZNF780AO75290 641 aaPredicted RBP15.79■□□□□ 0.12
TRIM39-210ENST00000440271 GTF2F2P13984 249 aa15.79■□□□□ 0.12
TRIM39-210ENST00000440271 RCC1P18754 421 aaPredicted RBP15.79■□□□□ 0.12
TRIM39-210ENST00000440271 GBX2P52951 348 aaPredicted RBP15.79■□□□□ 0.12
TRIM39-210ENST00000440271 CX3CL1P78423 397 aa15.79■□□□□ 0.12
TRIM39-210ENST00000440271 LRRC36Q1X8D7 754 aa15.79■□□□□ 0.12
TRIM39-210ENST00000440271 SLC22A6Q4U2R8 563 aa15.79■□□□□ 0.12
TRIM39-210ENST00000440271 DDI2Q5TDH0 399 aa15.79■□□□□ 0.12
TRIM39-210ENST00000440271 SPACA1Q9HBV2 294 aa15.79■□□□□ 0.12
TRIM39-210ENST00000440271 RCC2Q9P258 522 aaKnown RBP15.79■□□□□ 0.12
TRIM39-210ENST00000440271 AASSQ9UDR5 926 aa15.79■□□□□ 0.12
TRIM39-210ENST00000440271 A3GALT2U3KPV4 340 aa15.79■□□□□ 0.12
TRIM39-210ENST00000440271 CD2P06729 351 aa15.78■□□□□ 0.12
TRIM39-210ENST00000440271 EGR2P11161 476 aaPredicted RBP15.78■□□□□ 0.12
TRIM39-210ENST00000440271 TMEM267Q0VDI3 215 aaPredicted RBP15.78■□□□□ 0.12
TRIM39-210ENST00000440271 GNMTQ14749 295 aa15.78■□□□□ 0.12
TRIM39-210ENST00000440271 PYHIN1Q6K0P9 492 aa15.78■□□□□ 0.12
TRIM39-210ENST00000440271 TRAT1Q6PIZ9 186 aa15.78■□□□□ 0.12
TRIM39-210ENST00000440271 GAPTQ8N292 157 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms