RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 SLC35E3Q7Z769 313 aa15.76■□□□□ 0.11
SHROOM1-204ENST00000440118 LRRTM1Q86UE6 522 aa15.76■□□□□ 0.11
SHROOM1-204ENST00000440118 LYPD6Q86Y78 171 aa15.76■□□□□ 0.11
SHROOM1-204ENST00000440118 KCNG3Q8TAE7 436 aa15.76■□□□□ 0.11
SHROOM1-204ENST00000440118 CHPT1Q8WUD6 406 aa15.76■□□□□ 0.11
SHROOM1-204ENST00000440118 ANKRD60Q9BZ19 345 aa15.76■□□□□ 0.11
SHROOM1-204ENST00000440118 TRAM1Q15629 374 aa15.75■□□□□ 0.11
SHROOM1-204ENST00000440118 OXLD1Q5BKU9 147 aa15.75■□□□□ 0.11
SHROOM1-204ENST00000440118 SIGIRRQ6IA17 410 aa15.75■□□□□ 0.11
SHROOM1-204ENST00000440118 C10orf99Q6UWK7 81 aa15.75■□□□□ 0.11
SHROOM1-204ENST00000440118 IZUMO2Q6UXV1 221 aa15.75■□□□□ 0.11
SHROOM1-204ENST00000440118 SLC25A48Q6ZT89 311 aaKnown RBP15.75■□□□□ 0.11
SHROOM1-204ENST00000440118 ZNF329Q86UD4 541 aa15.75■□□□□ 0.11
SHROOM1-204ENST00000440118 GAPTQ8N292 157 aa15.75■□□□□ 0.11
SHROOM1-204ENST00000440118 OR6M1Q8NGM8 313 aa15.75■□□□□ 0.11
SHROOM1-204ENST00000440118 SETD6Q8TBK2 473 aa15.75■□□□□ 0.11
SHROOM1-204ENST00000440118 MRPL30Q8TCC3 161 aaKnown RBP15.75■□□□□ 0.11
SHROOM1-204ENST00000440118 EAF1Q96JC9 268 aaPredicted RBP15.75■□□□□ 0.11
SHROOM1-204ENST00000440118 KCNK15Q9H427 330 aa15.75■□□□□ 0.11
SHROOM1-204ENST00000440118 ABRACLQ9P1F3 81 aa15.75■□□□□ 0.11
SHROOM1-204ENST00000440118 ARL6IP5O75915 188 aa15.74■□□□□ 0.11
SHROOM1-204ENST00000440118 RGS11O94810 467 aa15.74■□□□□ 0.11
SHROOM1-204ENST00000440118 MOSP00540 346 aa15.74■□□□□ 0.11
SHROOM1-204ENST00000440118 UCHL1P09936 223 aa15.74■□□□□ 0.11
SHROOM1-204ENST00000440118 VSIG8P0DPA2 414 aa15.74■□□□□ 0.11
SHROOM1-204ENST00000440118 PSMA1P25786 263 aaKnown RBP15.74■□□□□ 0.11
SHROOM1-204ENST00000440118 RPS27AP62979 156 aaKnown RBP15.74■□□□□ 0.11
SHROOM1-204ENST00000440118 IRF3Q14653 427 aa15.74■□□□□ 0.11
SHROOM1-204ENST00000440118 TCTEX1D4Q5JR98 221 aa15.74■□□□□ 0.11
SHROOM1-204ENST00000440118 C1orf100Q5SVJ3 147 aa15.74■□□□□ 0.11
SHROOM1-204ENST00000440118 CNBD2Q96M20 576 aa15.74■□□□□ 0.11
SHROOM1-204ENST00000440118 NOL4LQ96MY1 436 aaPredicted RBP15.74■□□□□ 0.11
SHROOM1-204ENST00000440118 ABHD14AQ9BUJ0 271 aa15.74■□□□□ 0.11
SHROOM1-204ENST00000440118 BATF3Q9NR55 127 aa15.74■□□□□ 0.11
SHROOM1-204ENST00000440118 JPT1Q9UK76 154 aa15.74■□□□□ 0.11
SHROOM1-204ENST00000440118 BLOC1S6Q9UL45 172 aa15.74■□□□□ 0.11
SHROOM1-204ENST00000440118 NUDT19A8MXV4 375 aa15.73■□□□□ 0.11
SHROOM1-204ENST00000440118 BPNT1O95861 308 aa15.73■□□□□ 0.11
SHROOM1-204ENST00000440118 PRB2P02812 416 aaPredicted RBP15.73■□□□□ 0.11
SHROOM1-204ENST00000440118 CHATP28329 748 aa15.73■□□□□ 0.11
SHROOM1-204ENST00000440118 CD1BP29016 333 aa15.73■□□□□ 0.11
SHROOM1-204ENST00000440118 GP2P55259 537 aaKnown RBP15.73■□□□□ 0.11
SHROOM1-204ENST00000440118 RPS25P62851 125 aaKnown RBP15.73■□□□□ 0.11
SHROOM1-204ENST00000440118 MLLT11Q13015 90 aaPredicted RBP15.73■□□□□ 0.11
SHROOM1-204ENST00000440118 GNMTQ14749 295 aa15.73■□□□□ 0.11
SHROOM1-204ENST00000440118 P2RY14Q15391 338 aa15.73■□□□□ 0.11
SHROOM1-204ENST00000440118 C6orf201Q7Z4U5 140 aa15.73■□□□□ 0.11
SHROOM1-204ENST00000440118 ZNF554Q86TJ5 538 aa15.73■□□□□ 0.11
SHROOM1-204ENST00000440118 ZNF439Q8NDP4 499 aa15.73■□□□□ 0.11
SHROOM1-204ENST00000440118 OR51D1Q8NGF3 324 aa15.73■□□□□ 0.11
SHROOM1-204ENST00000440118 OR52L2PQ8NGH6 319 aa15.73■□□□□ 0.11
SHROOM1-204ENST00000440118 IL1F10Q8WWZ1 152 aa15.73■□□□□ 0.11
SHROOM1-204ENST00000440118 GALMQ96C23 342 aa15.73■□□□□ 0.11
SHROOM1-204ENST00000440118 RASL11BQ9BPW5 248 aa15.73■□□□□ 0.11
SHROOM1-204ENST00000440118 SULT4A1Q9BR01 284 aa15.73■□□□□ 0.11
SHROOM1-204ENST00000440118 URM1Q9BTM9 101 aaKnown RBP15.73■□□□□ 0.11
SHROOM1-204ENST00000440118 DUSP21Q9H596 190 aa15.73■□□□□ 0.11
SHROOM1-204ENST00000440118 MBNL3Q9NUK0 354 aaKnown RBP15.73■□□□□ 0.11
SHROOM1-204ENST00000440118 LIN7CQ9NUP9 197 aaKnown RBP15.73■□□□□ 0.11
SHROOM1-204ENST00000440118 PLEKHJ1Q9NW61 149 aa15.73■□□□□ 0.11
SHROOM1-204ENST00000440118 LINC00527Q9UJ94 153 aa15.73■□□□□ 0.11
SHROOM1-204ENST00000440118 SLC22A1O15245 554 aa15.72■□□□□ 0.11
SHROOM1-204ENST00000440118 ARSBP15848 533 aa15.72■□□□□ 0.11
SHROOM1-204ENST00000440118 BLVRBP30043 206 aaPredicted RBP15.72■□□□□ 0.11
SHROOM1-204ENST00000440118 PPP1CCP36873 323 aaKnown RBP15.72■□□□□ 0.11
SHROOM1-204ENST00000440118 EBI3Q14213 229 aa15.72■□□□□ 0.11
SHROOM1-204ENST00000440118 RAB11BQ15907 218 aa15.72■□□□□ 0.11
SHROOM1-204ENST00000440118 CT45A1Q5HYN5 189 aa15.72■□□□□ 0.11
SHROOM1-204ENST00000440118 KPRPQ5T749 579 aaPredicted RBP15.72■□□□□ 0.11
SHROOM1-204ENST00000440118 PRSS48Q7RTY5 328 aa15.72■□□□□ 0.11
SHROOM1-204ENST00000440118 REC114Q7Z4M0 266 aa15.72■□□□□ 0.11
SHROOM1-204ENST00000440118 OR2AK2Q8NG84 335 aa15.72■□□□□ 0.11
SHROOM1-204ENST00000440118 CT45A3Q8NHU0 189 aa15.72■□□□□ 0.11
SHROOM1-204ENST00000440118 ST6GALNAC6Q969X2 333 aa15.72■□□□□ 0.11
SHROOM1-204ENST00000440118 NICN1Q9BSH3 213 aa15.72■□□□□ 0.11
SHROOM1-204ENST00000440118 FAAP24Q9BTP7 215 aa15.72■□□□□ 0.11
SHROOM1-204ENST00000440118 STEAP1Q9UHE8 339 aa15.72■□□□□ 0.11
SHROOM1-204ENST00000440118 AP4M1O00189 453 aa15.71■□□□□ 0.11
SHROOM1-204ENST00000440118 CRHBPP24387 322 aa15.71■□□□□ 0.11
SHROOM1-204ENST00000440118 CALRP27797 417 aaKnown RBP15.71■□□□□ 0.11
SHROOM1-204ENST00000440118 ZNF134P52741 427 aa15.71■□□□□ 0.11
SHROOM1-204ENST00000440118 ZNF137PP52743 207 aa15.71■□□□□ 0.11
SHROOM1-204ENST00000440118 UNC119Q13432 240 aa15.71■□□□□ 0.11
SHROOM1-204ENST00000440118 TPBGQ13641 420 aa15.71■□□□□ 0.11
SHROOM1-204ENST00000440118 MORN2Q502X0 79 aa15.71■□□□□ 0.11
SHROOM1-204ENST00000440118 STEAP3Q658P3 488 aa15.71■□□□□ 0.11
SHROOM1-204ENST00000440118 MOB1BQ7L9L4 216 aa15.71■□□□□ 0.11
SHROOM1-204ENST00000440118 OR8H1Q8NGG4 311 aa15.71■□□□□ 0.11
SHROOM1-204ENST00000440118 PHF21AQ96BD5 680 aa15.71■□□□□ 0.11
SHROOM1-204ENST00000440118 CYYR1Q96J86 154 aa15.71■□□□□ 0.11
SHROOM1-204ENST00000440118 GON7Q9BXV9 100 aa15.71■□□□□ 0.11
SHROOM1-204ENST00000440118 ISYNA1Q9NPH2 558 aa15.71■□□□□ 0.11
SHROOM1-204ENST00000440118 AK6Q9Y3D8 172 aaKnown RBP15.71■□□□□ 0.11
SHROOM1-204ENST00000440118 ZNF736B4DX44 427 aaPredicted RBP15.7■□□□□ 0.1
SHROOM1-204ENST00000440118 LANCL1O43813 399 aa15.7■□□□□ 0.1
SHROOM1-204ENST00000440118 IGHG2P01859 326 aa15.7■□□□□ 0.1
SHROOM1-204ENST00000440118 IGLL1P15814 213 aa15.7■□□□□ 0.1
SHROOM1-204ENST00000440118 CPEP16870 476 aa15.7■□□□□ 0.1
SHROOM1-204ENST00000440118 RANBP1P43487 201 aa15.7■□□□□ 0.1
SHROOM1-204ENST00000440118 MAP2K4P45985 399 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms