RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 UBALD1Q8TB05 177 aa8.39□□□□□ -1.07
MCF2L-216ENST00000439475 SETD6Q8TBK2 473 aa8.39□□□□□ -1.07
MCF2L-216ENST00000439475 MRPL30Q8TCC3 161 aaKnown RBP8.39□□□□□ -1.07
MCF2L-216ENST00000439475 SULT4A1Q9BR01 284 aa8.39□□□□□ -1.07
MCF2L-216ENST00000439475 NICN1Q9BSH3 213 aa8.39□□□□□ -1.07
MCF2L-216ENST00000439475 ZNF702PQ9H963 129 aa8.39□□□□□ -1.07
MCF2L-216ENST00000439475 VCX3AQ9NNX9 186 aa8.39□□□□□ -1.07
MCF2L-216ENST00000439475 JPT1Q9UK76 154 aa8.39□□□□□ -1.07
MCF2L-216ENST00000439475 SIGLEC9Q9Y336 463 aa8.39□□□□□ -1.07
MCF2L-216ENST00000439475 SOCS1O15524 211 aa8.38□□□□□ -1.07
MCF2L-216ENST00000439475 YPEL1O60688 119 aa8.38□□□□□ -1.07
MCF2L-216ENST00000439475 SNRNP70P08621 437 aaKnown RBP8.38□□□□□ -1.07
MCF2L-216ENST00000439475 GADD45AP24522 165 aa8.38□□□□□ -1.07
MCF2L-216ENST00000439475 CLDN12P56749 244 aa8.38□□□□□ -1.07
MCF2L-216ENST00000439475 KRTAP10-3P60369 221 aa8.38□□□□□ -1.07
MCF2L-216ENST00000439475 ARL6IP1Q15041 203 aa8.38□□□□□ -1.07
MCF2L-216ENST00000439475 C2orf68Q2NKX9 166 aa8.38□□□□□ -1.07
MCF2L-216ENST00000439475 KCTD21Q4G0X4 260 aa8.38□□□□□ -1.07
MCF2L-216ENST00000439475 LY6G6FQ5SQ64 297 aa8.38□□□□□ -1.07
MCF2L-216ENST00000439475 C22orf42Q6IC83 251 aa8.38□□□□□ -1.07
MCF2L-216ENST00000439475 SLC25A48Q6ZT89 311 aaKnown RBP8.38□□□□□ -1.07
MCF2L-216ENST00000439475 MOB1BQ7L9L4 216 aa8.38□□□□□ -1.07
MCF2L-216ENST00000439475 CENPVQ7Z7K6 275 aaPredicted RBP8.38□□□□□ -1.07
MCF2L-216ENST00000439475 TPRA1Q86W33 373 aa8.38□□□□□ -1.07
MCF2L-216ENST00000439475 TGIF2LXQ8IUE1 241 aa8.38□□□□□ -1.07
MCF2L-216ENST00000439475 LYG1Q8N1E2 194 aa8.38□□□□□ -1.07
MCF2L-216ENST00000439475 DRAM1Q8N682 238 aa8.38□□□□□ -1.07
MCF2L-216ENST00000439475 OR10V1Q8NGI7 309 aa8.38□□□□□ -1.07
MCF2L-216ENST00000439475 OR2T10Q8NGZ9 312 aa8.38□□□□□ -1.07
MCF2L-216ENST00000439475 OR56B4Q8NH76 319 aa8.38□□□□□ -1.07
MCF2L-216ENST00000439475 YPEL2Q96QA6 119 aa8.38□□□□□ -1.07
MCF2L-216ENST00000439475 GFI1Q99684 422 aa8.38□□□□□ -1.07
MCF2L-216ENST00000439475 CMSS1Q9BQ75 279 aaKnown RBP8.38□□□□□ -1.07
MCF2L-216ENST00000439475 MMP27Q9H306 513 aa8.38□□□□□ -1.07
MCF2L-216ENST00000439475 GHITMQ9H3K2 345 aa8.38□□□□□ -1.07
MCF2L-216ENST00000439475 STUB1Q9UNE7 303 aa8.38□□□□□ -1.07
MCF2L-216ENST00000439475 MOB4Q9Y3A3 225 aa8.38□□□□□ -1.07
MCF2L-216ENST00000439475 TRBV6-6A0A0A6YYG2 114 aa8.37□□□□□ -1.07
MCF2L-216ENST00000439475 IGHV1-3A0A0C4DH29 117 aa8.37□□□□□ -1.07
MCF2L-216ENST00000439475 A0A1W2PPI3 338 aa8.37□□□□□ -1.07
MCF2L-216ENST00000439475 IFITM5A6NNB3 132 aa8.37□□□□□ -1.07
MCF2L-216ENST00000439475 CSF1P09603 554 aa8.37□□□□□ -1.07
MCF2L-216ENST00000439475 RAB6AP20340 208 aa8.37□□□□□ -1.07
MCF2L-216ENST00000439475 CD1BP29016 333 aa8.37□□□□□ -1.07
MCF2L-216ENST00000439475 HABP2Q14520 560 aaPredicted RBP8.37□□□□□ -1.07
MCF2L-216ENST00000439475 HMGN3Q15651 99 aa8.37□□□□□ -1.07
MCF2L-216ENST00000439475 ABCA11PQ4W5N1 156 aa8.37□□□□□ -1.07
MCF2L-216ENST00000439475 CT45A1Q5HYN5 189 aa8.37□□□□□ -1.07
MCF2L-216ENST00000439475 C9orf152Q5JTZ5 239 aa8.37□□□□□ -1.07
MCF2L-216ENST00000439475 UTF1Q5T230 341 aa8.37□□□□□ -1.07
MCF2L-216ENST00000439475 CT45A3Q8NHU0 189 aa8.37□□□□□ -1.07
MCF2L-216ENST00000439475 RTN4IP1Q8WWV3 396 aaPredicted RBP8.37□□□□□ -1.07
MCF2L-216ENST00000439475 KCTD7Q96MP8 289 aa8.37□□□□□ -1.07
MCF2L-216ENST00000439475 CENPOQ9BU64 300 aa8.37□□□□□ -1.07
MCF2L-216ENST00000439475 KCNK15Q9H427 330 aa8.37□□□□□ -1.07
MCF2L-216ENST00000439475 SERTAD4Q9NUC0 356 aa8.37□□□□□ -1.07
MCF2L-216ENST00000439475 TXNL4BQ9NX01 149 aaKnown RBP8.37□□□□□ -1.07
MCF2L-216ENST00000439475 STAB1Q9NY15 2570 aa8.37□□□□□ -1.07
MCF2L-216ENST00000439475 TET2Q6N021 2002 aaPredicted RBP8.37□□□□□ -1.07
MCF2L-216ENST00000439475 A0A087WXM4 84 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 TMEM272A0A1B0GTI8 110 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 NOTOA8MTQ0 251 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 LDLRAD4O15165 306 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 HSPA12AO43301 675 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 FGF16O43320 207 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 FBXO24O75426 580 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 NAPSAO96009 420 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 IGKV1D-33P01593 117 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 IGKV1-33P01594 117 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 CD3GP09693 182 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 REG1BP48304 166 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 ZNF137PP52743 207 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 TMEM50BP56557 158 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 EBI3Q14213 229 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 DIAPH2-AS1Q14236 149 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 HNF4GQ14541 408 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 NEDD8Q15843 81 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 TIMM50Q3ZCQ8 353 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 ZNF880Q6PDB4 577 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 ZNF439Q8NDP4 499 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 OR2AK2Q8NG84 335 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 OR8H1Q8NGG4 311 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 OR52L2PQ8NGH6 319 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 IL1F10Q8WWZ1 152 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 EDARADDQ8WWZ3 215 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 CFHR4Q92496 578 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 ST6GALNAC6Q969X2 333 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 PTX4Q96A99 478 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 RAB3CQ96E17 227 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 ARHGAP5-AS1Q96IT6 56 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 ABHD14AQ9BUJ0 271 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 PECRQ9BY49 303 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 C12orf4Q9NQ89 552 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 PIPOXQ9P0Z9 390 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 AK3Q9UIJ7 227 aa8.36□□□□□ -1.07
MCF2L-216ENST00000439475 A0A0A6YYD4 124 aa8.35□□□□□ -1.07
MCF2L-216ENST00000439475 NCBP2LA6PVI3 153 aaKnown RBP8.35□□□□□ -1.07
MCF2L-216ENST00000439475 SLC31A2O15432 143 aa8.35□□□□□ -1.07
MCF2L-216ENST00000439475 LANCL1O43813 399 aa8.35□□□□□ -1.07
MCF2L-216ENST00000439475 SCGNO76038 276 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms