RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 HSD17B10Q99714 261 aaKnown RBP13.1□□□□□ -0.31
TSC2-206ENST00000439117 C5orf17Q8NAS9 161 aa13.1□□□□□ -0.31
TSC2-206ENST00000439117 OR10D3Q8NH80 312 aa13.1□□□□□ -0.31
TSC2-206ENST00000439117 MOB3AQ96BX8 217 aa13.1□□□□□ -0.31
TSC2-206ENST00000439117 SF3B6Q9Y3B4 125 aaKnown RBP13.1□□□□□ -0.31
TSC2-206ENST00000439117 A0A1W2PN81 502 aa13.1□□□□□ -0.31
TSC2-206ENST00000439117 A0A1W2PQD3 144 aa13.1□□□□□ -0.31
TSC2-206ENST00000439117 FOXS1O43638 330 aa13.1□□□□□ -0.31
TSC2-206ENST00000439117 C1QL1O75973 258 aa13.1□□□□□ -0.31
TSC2-206ENST00000439117 MPZL1O95297 269 aa13.1□□□□□ -0.31
TSC2-206ENST00000439117 TMEM50BP56557 158 aa13.1□□□□□ -0.31
TSC2-206ENST00000439117 DMRTA1Q5VZB9 504 aa13.1□□□□□ -0.31
TSC2-206ENST00000439117 LAIR2Q6ISS4 152 aa13.1□□□□□ -0.31
TSC2-206ENST00000439117 DNASE2O00115 360 aaPredicted RBP13.09□□□□□ -0.31
TSC2-206ENST00000439117 RNF224P0DH78 156 aa13.09□□□□□ -0.31
TSC2-206ENST00000439117 FAM219AQ8IW50 185 aa13.09□□□□□ -0.31
TSC2-206ENST00000439117 APCDD1LQ8NCL9 501 aa13.09□□□□□ -0.31
TSC2-206ENST00000439117 ADTRPQ96IZ2 230 aa13.09□□□□□ -0.31
TSC2-206ENST00000439117 CES1P1Q9UKY3 287 aa13.09□□□□□ -0.31
TSC2-206ENST00000439117 TPRP12270 2363 aaKnown RBP13.09□□□□□ -0.31
TSC2-206ENST00000439117 G6PCP35575 357 aa13.09□□□□□ -0.31
TSC2-206ENST00000439117 MFAP2P55001 183 aa13.09□□□□□ -0.31
TSC2-206ENST00000439117 CYB5R2Q6BCY4 276 aa13.09□□□□□ -0.31
TSC2-206ENST00000439117 STXBP6Q8NFX7 210 aa13.09□□□□□ -0.31
TSC2-206ENST00000439117 RBM14Q96PK6 669 aaKnown RBP13.09□□□□□ -0.31
TSC2-206ENST00000439117 CCL28Q9NRJ3 127 aa13.09□□□□□ -0.31
TSC2-206ENST00000439117 FOXJ2Q9P0K8 574 aa13.09□□□□□ -0.31
TSC2-206ENST00000439117 IL19Q9UHD0 177 aa13.09□□□□□ -0.31
TSC2-206ENST00000439117 ASXL3Q9C0F0 2248 aa13.09□□□□□ -0.31
TSC2-206ENST00000439117 HKR1P10072 659 aa13.09□□□□□ -0.31
TSC2-206ENST00000439117 FSTP19883 344 aa13.09□□□□□ -0.31
TSC2-206ENST00000439117 COMPP49747 757 aaPredicted RBP13.09□□□□□ -0.31
TSC2-206ENST00000439117 DSPPQ9NZW4 1301 aa13.09□□□□□ -0.31
TSC2-206ENST00000439117 SPAARA0A1B0GVQ0 90 aa13.09□□□□□ -0.31
TSC2-206ENST00000439117 CD8AP01732 235 aa13.09□□□□□ -0.31
TSC2-206ENST00000439117 LSM6P62312 80 aaKnown RBP13.09□□□□□ -0.31
TSC2-206ENST00000439117 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.09□□□□□ -0.31
TSC2-206ENST00000439117 ATG4DQ86TL0 474 aaPredicted RBP13.09□□□□□ -0.31
TSC2-206ENST00000439117 PLXNA1Q9UIW2 1896 aa13.08□□□□□ -0.31
TSC2-206ENST00000439117 DANCRP0C864 163 aa13.08□□□□□ -0.31
TSC2-206ENST00000439117 RND3P61587 244 aa13.08□□□□□ -0.31
TSC2-206ENST00000439117 SPNS3Q6ZMD2 512 aa13.08□□□□□ -0.31
TSC2-206ENST00000439117 ZBTB34Q8NCN2 500 aa13.08□□□□□ -0.31
TSC2-206ENST00000439117 OR4S2Q8NH73 311 aa13.08□□□□□ -0.31
TSC2-206ENST00000439117 SLC25A38Q96DW6 304 aa13.08□□□□□ -0.31
TSC2-206ENST00000439117 FAM117AQ9C073 453 aa13.08□□□□□ -0.31
TSC2-206ENST00000439117 HRKO00198 91 aa13.08□□□□□ -0.32
TSC2-206ENST00000439117 ZNF32P17041 273 aa13.08□□□□□ -0.32
TSC2-206ENST00000439117 NANOS3P60323 173 aaKnown RBP13.08□□□□□ -0.32
TSC2-206ENST00000439117 RUNX1Q01196 453 aa13.08□□□□□ -0.32
TSC2-206ENST00000439117 OR8A1Q8NGG7 326 aa13.08□□□□□ -0.32
TSC2-206ENST00000439117 OR6X1Q8NH79 312 aa13.08□□□□□ -0.32
TSC2-206ENST00000439117 RNF133Q8WVZ7 376 aa13.08□□□□□ -0.32
TSC2-206ENST00000439117 WDR54Q9H977 334 aa13.08□□□□□ -0.32
TSC2-206ENST00000439117 AURKAIP1Q9NWT8 199 aaPredicted RBP13.08□□□□□ -0.32
TSC2-206ENST00000439117 TMEM238LA0A1B0GVL6 79 aa13.08□□□□□ -0.32
TSC2-206ENST00000439117 A6NJY4 79 aa13.08□□□□□ -0.32
TSC2-206ENST00000439117 BTF3P20290 206 aaKnown RBP13.08□□□□□ -0.32
TSC2-206ENST00000439117 LOXL4Q96JB6 756 aa13.08□□□□□ -0.32
TSC2-206ENST00000439117 OPN3Q9H1Y3 402 aaPredicted RBP13.08□□□□□ -0.32
TSC2-206ENST00000439117 ZNF665Q9H7R5 613 aa13.08□□□□□ -0.32
TSC2-206ENST00000439117 ZNF785A8K8V0 405 aa13.07□□□□□ -0.32
TSC2-206ENST00000439117 HOXA5P20719 270 aa13.07□□□□□ -0.32
TSC2-206ENST00000439117 WDR25Q64LD2 544 aaPredicted RBP13.07□□□□□ -0.32
TSC2-206ENST00000439117 SPINK14Q6IE38 97 aa13.07□□□□□ -0.32
TSC2-206ENST00000439117 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.07□□□□□ -0.32
TSC2-206ENST00000439117 R3HDM4Q96D70 268 aa13.07□□□□□ -0.32
TSC2-206ENST00000439117 GVINP1Q7Z2Y8 2422 aa13.07□□□□□ -0.32
TSC2-206ENST00000439117 HERPUD1Q15011 391 aa13.07□□□□□ -0.32
TSC2-206ENST00000439117 ZNF774Q6NX45 483 aa13.07□□□□□ -0.32
TSC2-206ENST00000439117 MPC1Q9Y5U8 109 aa13.07□□□□□ -0.32
TSC2-206ENST00000439117 ASB10Q8WXI3 467 aa13.07□□□□□ -0.32
TSC2-206ENST00000439117 OR2W1Q9Y3N9 320 aa13.07□□□□□ -0.32
TSC2-206ENST00000439117 TRBV5-5A0A0J9YX44 114 aa13.07□□□□□ -0.32
TSC2-206ENST00000439117 H3BVH4 76 aa13.07□□□□□ -0.32
TSC2-206ENST00000439117 ERGP11308 486 aa13.07□□□□□ -0.32
TSC2-206ENST00000439117 RFESDQ8TAC1 157 aa13.07□□□□□ -0.32
TSC2-206ENST00000439117 ZNF519Q8TB69 540 aa13.07□□□□□ -0.32
TSC2-206ENST00000439117 ZNF501Q96CX3 271 aaPredicted RBP13.07□□□□□ -0.32
TSC2-206ENST00000439117 TUBA4BQ9H853 241 aa13.07□□□□□ -0.32
TSC2-206ENST00000439117 CISD1Q9NZ45 108 aaKnown RBP13.07□□□□□ -0.32
TSC2-206ENST00000439117 B4E171 279 aa13.06□□□□□ -0.32
TSC2-206ENST00000439117 ACTL6AO96019 429 aa13.06□□□□□ -0.32
TSC2-206ENST00000439117 RBP4P02753 201 aa13.06□□□□□ -0.32
TSC2-206ENST00000439117 TSPAN7P41732 249 aa13.06□□□□□ -0.32
TSC2-206ENST00000439117 P2RY4P51582 365 aa13.06□□□□□ -0.32
TSC2-206ENST00000439117 RAC3P60763 192 aa13.06□□□□□ -0.32
TSC2-206ENST00000439117 SPINK9Q5DT21 86 aa13.06□□□□□ -0.32
TSC2-206ENST00000439117 MRGPRFQ96AM1 343 aa13.06□□□□□ -0.32
TSC2-206ENST00000439117 PGLYRP3Q96LB9 341 aa13.06□□□□□ -0.32
TSC2-206ENST00000439117 NDUFAF3Q9BU61 184 aa13.06□□□□□ -0.32
TSC2-206ENST00000439117 SEBOXQ9HB31 216 aaPredicted RBP13.06□□□□□ -0.32
TSC2-206ENST00000439117 TMEM38BQ9NVV0 291 aa13.06□□□□□ -0.32
TSC2-206ENST00000439117 IL36GQ9NZH8 169 aa13.06□□□□□ -0.32
TSC2-206ENST00000439117 CSRP3P50461 194 aa13.06□□□□□ -0.32
TSC2-206ENST00000439117 SSX8Q7RTT4 187 aa13.06□□□□□ -0.32
TSC2-206ENST00000439117 LYG1Q8N1E2 194 aa13.06□□□□□ -0.32
TSC2-206ENST00000439117 TMEM52Q8NDY8 209 aa13.06□□□□□ -0.32
TSC2-206ENST00000439117 OR5A2Q8NGI9 324 aa13.06□□□□□ -0.32
TSC2-206ENST00000439117 SSMEM1Q8WWF3 244 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms