RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 IGKV1D-33P01593 117 aa1.82□□□□□ -2.12
TRAPPC13-204ENST00000438419 IGKV1-33P01594 117 aa1.82□□□□□ -2.12
TRAPPC13-204ENST00000438419 ZNF3P17036 446 aa1.82□□□□□ -2.12
TRAPPC13-204ENST00000438419 ZNF235Q14590 738 aa1.82□□□□□ -2.12
TRAPPC13-204ENST00000438419 LGALSLQ3ZCW2 172 aaPredicted RBP1.82□□□□□ -2.12
TRAPPC13-204ENST00000438419 DEFB134Q4QY38 66 aa1.82□□□□□ -2.12
TRAPPC13-204ENST00000438419 RBM48Q5RL73 367 aaKnown RBP1.82□□□□□ -2.12
TRAPPC13-204ENST00000438419 TMEM215Q68D42 235 aa1.82□□□□□ -2.12
TRAPPC13-204ENST00000438419 LAIR2Q6ISS4 152 aa1.82□□□□□ -2.12
TRAPPC13-204ENST00000438419 FAM183BPQ6ZVS7 135 aa1.82□□□□□ -2.12
TRAPPC13-204ENST00000438419 OLIG3Q7RTU3 272 aa1.82□□□□□ -2.12
TRAPPC13-204ENST00000438419 CRLF3Q8IUI8 442 aa1.82□□□□□ -2.12
TRAPPC13-204ENST00000438419 DEFB123Q8N688 67 aa1.82□□□□□ -2.12
TRAPPC13-204ENST00000438419 ACBD4Q8NC06 268 aa1.82□□□□□ -2.12
TRAPPC13-204ENST00000438419 RNASEH2CQ8TDP1 164 aaKnown RBP1.82□□□□□ -2.12
TRAPPC13-204ENST00000438419 LRRC45Q96CN5 670 aa1.82□□□□□ -2.12
TRAPPC13-204ENST00000438419 DUSP21Q9H596 190 aa1.82□□□□□ -2.12
TRAPPC13-204ENST00000438419 RHOFQ9HBH0 211 aa1.82□□□□□ -2.12
TRAPPC13-204ENST00000438419 ZNF586Q9NXT0 402 aa1.82□□□□□ -2.12
TRAPPC13-204ENST00000438419 R4GN34 69 aa1.82□□□□□ -2.12
TRAPPC13-204ENST00000438419 SPTBN4Q9H254 2564 aa1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 PIK3C2AO00443 1686 aa1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 MKI67P46013 3256 aaKnown RBP1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 LAMC1P11047 1609 aa1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 PTPN23Q9H3S7 1636 aa1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 EYSQ5T1H1 3165 aa1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 LMTK2Q8IWU2 1503 aa1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 SYCP2Q9BX26 1530 aa1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 ASH1LQ9NR48 2969 aaKnown RBP1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 TMEM2Q9UHN6 1383 aa1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 A0A1B0GTI1 187 aa1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 A8MWP4 228 aa1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 TOR1AO14656 332 aa1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 CALUO43852 315 aaPredicted RBP1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 YEATS4O95619 227 aa1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 IGHMP01871 453 aa1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 LIMS3P0CW19 117 aa1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 LIMS4P0CW20 117 aa1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 HRES1P13985 223 aa1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 GABRA1P14867 456 aa1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 CD34P28906 385 aa1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 RHOAP61586 193 aa1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 DYNLL1P63167 89 aaKnown RBP1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 SLC9A3R2Q15599 337 aa1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 TMEM249Q2WGJ8 235 aa1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 DEFB115Q30KQ5 88 aa1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 CLEC20AQ6ZU45 233 aa1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 SLC25A45Q8N413 288 aa1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 ZIC4Q8N9L1 334 aa1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 MAL2Q969L2 176 aa1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 DDIT4LQ96D03 193 aa1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 TSSK6Q9BXA6 273 aa1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 SCML1Q9UN30 329 aa1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 TBL2Q9Y4P3 447 aaKnown RBP1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 PKD1L3Q7Z443 1732 aa1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 NRAPQ86VF7 1730 aa1.81□□□□□ -2.12
TRAPPC13-204ENST00000438419 LRRC37A3O60309 1634 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 NRXN3Q9Y4C0 1643 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 GCN1Q92616 2671 aaKnown RBP1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 NUP153P49790 1475 aaKnown RBP1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 ERVK-7P63135 1459 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 MUC3AQ02505 3323 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 KIAA0232Q92628 1395 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 ANKRD17O75179 2603 aaKnown RBP1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 TEP1Q99973 2627 aaKnown RBP1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 COL24A1Q17RW2 1714 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 BRCA2P51587 3418 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 IGKV3D-11A0A0A0MRZ8 115 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 IGHV1-45A0A0A0MS14 117 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 A0A1W2PNN7 141 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 A6NED7 52 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 EFCAB9A8MZ26 197 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 C4orf51C9J302 202 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 F8VZ95 297 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 C15orf65H3BRN8 121 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 TCF21O43680 179 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 MPZL2O60487 215 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 IGLV6-57P01721 117 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 AKR1C4P17516 323 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 CRABP2P29373 138 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 RAB2AP61019 212 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 SKP1P63208 163 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 IHHQ14623 411 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 ZNF141Q15928 474 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 PYDC2Q56P42 97 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 CPNE9Q8IYJ1 553 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 ATP6V1C2Q8NEY4 427 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 OR7G1Q8NGA0 311 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 DYNC2LI1Q8TCX1 351 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 REEP6Q96HR9 211 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 HBEGFQ99075 208 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 ZNF251Q9BRH9 671 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 METTL17Q9H7H0 456 aaPredicted RBP1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 ASCL3Q9NQ33 180 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 DMAC2Q9NW81 257 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 ZNHIT6Q9NWK9 470 aaKnown RBP1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 C1orf109Q9NX04 203 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 ZNF391Q9UJN7 358 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 FBXL3Q9UKT7 428 aa1.8□□□□□ -2.12
TRAPPC13-204ENST00000438419 ZNF638Q14966 1978 aaKnown RBP1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms