RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 CLDN2P57739 230 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 TAF10Q12962 218 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 PSG7Q13046 419 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 PMVKQ15126 192 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 GSG1Q2KHT4 349 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 LINC01620Q4KN68 170 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 MUC21Q5SSG8 566 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 HES3Q5TGS1 186 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 FNDC7Q5VTL7 733 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 GOLT1AQ6ZVE7 132 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 PRSS45Q7RTY3 260 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 VKORC1L1Q8N0U8 176 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 OR5A1Q8NGJ0 315 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 Q96MF0 132 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 SIGLEC12Q96PQ1 595 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 DNAJC27Q9NZQ0 273 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 LOXL2Q9Y4K0 774 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 SCN8AQ9UQD0 1980 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 CKAP5Q14008 2032 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 A0A087WX48 190 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.61□□□□□ -1.67
PTPN4-203ENST00000430976 NDUFC2O95298 119 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 NAPSAO96009 420 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 HIST1H1CP16403 213 aaKnown RBP4.61□□□□□ -1.67
PTPN4-203ENST00000430976 RPS23P62266 143 aaKnown RBP4.61□□□□□ -1.67
PTPN4-203ENST00000430976 LIAT1Q6ZQX7 453 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 TMEM179BQ7Z7N9 219 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 WFDC3Q8IUB2 231 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 DTWD1Q8N5C7 304 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 OR10P1Q8NGE3 313 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 PGLYRP2Q96PD5 576 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 PRSS22Q9GZN4 317 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 SLC52A3Q9NQ40 469 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 POLR1DQ9Y2S0 133 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 SIGLEC9Q9Y336 463 aa4.61□□□□□ -1.67
PTPN4-203ENST00000430976 NWD1Q149M9 1564 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 FER1L5A0AVI2 2057 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 NUP214P35658 2090 aaPredicted RBP4.6□□□□□ -1.67
PTPN4-203ENST00000430976 MED12Q93074 2177 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 TRAV8-6A0A0B4J262 113 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 A0A1W2PRD5 423 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 OR2M5A3KFT3 312 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 GABARAPH6UMI1 98 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 SYNGR1O43759 233 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 IGLC6P0CF74 106 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 C1QTNF8P60827 252 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 RPL15P61313 204 aaKnown RBP4.6□□□□□ -1.67
PTPN4-203ENST00000430976 RPS24P62847 133 aaKnown RBP4.6□□□□□ -1.67
PTPN4-203ENST00000430976 SLC35A1P78382 337 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 CFHR1Q03591 330 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 FAM166AQ6J272 317 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 GAGE2AQ6NT46 116 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 TMEM91Q6ZNR0 172 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 BHLHA9Q7RTU4 235 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.6□□□□□ -1.67
PTPN4-203ENST00000430976 MBD3L2Q8NHZ7 208 aaPredicted RBP4.6□□□□□ -1.67
PTPN4-203ENST00000430976 TMEM101Q96IK0 257 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 DCBLD2Q96PD2 775 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 MCEEQ96PE7 176 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 SLC25A21Q9BQT8 299 aaPredicted RBP4.6□□□□□ -1.67
PTPN4-203ENST00000430976 GPR35Q9HC97 309 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 CLCF1Q9UBD9 225 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 COQ4Q9Y3A0 265 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 SPEF2Q9C093 1822 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 SHPRHQ149N8 1683 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 HCRTO43612 131 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 APODP05090 189 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 IGLC1P0CG04 106 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 AQP1P29972 269 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 OPRM1P35372 400 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 RBMXP38159 391 aaKnown RBP4.6□□□□□ -1.67
PTPN4-203ENST00000430976 NXPH1P58417 271 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 RHOGP84095 191 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 HHEXQ03014 270 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 COL10A1Q03692 680 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 SP6Q3SY56 376 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 C1orf220Q5T0J3 134 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 GTSCR1Q86UQ5 136 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 PTGR2Q8N8N7 351 aaPredicted RBP4.6□□□□□ -1.67
PTPN4-203ENST00000430976 MDS2Q8NDY4 140 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 OR5AP2Q8NGF4 316 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 ZNF519Q8TB69 540 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 DOK4Q8TEW6 326 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 SLC25A46Q96AG3 418 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 BANF2Q9H503 90 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 TECRQ9NZ01 308 aaKnown RBP4.6□□□□□ -1.67
PTPN4-203ENST00000430976 CABIN1Q9Y6J0 2220 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 CACNA1FO60840 1977 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 hCG_1818297A0A087WSY0 165 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 MED19A0JLT2 244 aaPredicted RBP4.6□□□□□ -1.67
PTPN4-203ENST00000430976 A8MT66 165 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 ZNF670-ZNF695F2Z2N8 137 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 REM1O75628 298 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 IGKV5-2P06315 115 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 CXCL1P09341 107 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 GNB3P16520 340 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 ELK1P19419 428 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 PGFP49763 221 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 FAM27E3Q08E93 113 aa4.6□□□□□ -1.67
PTPN4-203ENST00000430976 UNC119Q13432 240 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms