RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	PDCD6	O75340	191 aa		13.98	□□□□□ -0.17
MRPL28-203	ENST00000429738	PF4	P02776	101 aa		13.98	□□□□□ -0.17
MRPL28-203	ENST00000429738	CD37	P11049	281 aa		13.98	□□□□□ -0.17
MRPL28-203	ENST00000429738	GABPB1	Q06547	395 aa	Predicted RBP	13.98	□□□□□ -0.17
MRPL28-203	ENST00000429738	IRF3	Q14653	427 aa		13.98	□□□□□ -0.17
MRPL28-203	ENST00000429738	C1orf100	Q5SVJ3	147 aa		13.98	□□□□□ -0.17
MRPL28-203	ENST00000429738	SLC35E3	Q7Z769	313 aa		13.98	□□□□□ -0.17
MRPL28-203	ENST00000429738		Q8N9W7	124 aa		13.98	□□□□□ -0.17
MRPL28-203	ENST00000429738	MRPL30	Q8TCC3	161 aa	Known RBP	13.98	□□□□□ -0.17
MRPL28-203	ENST00000429738	PHYHIP	Q92561	330 aa		13.98	□□□□□ -0.17
MRPL28-203	ENST00000429738	FAM46B	Q96A09	425 aa		13.98	□□□□□ -0.17
MRPL28-203	ENST00000429738	CST11	Q9H112	138 aa		13.98	□□□□□ -0.17
MRPL28-203	ENST00000429738	ABCG5	Q9H222	651 aa		13.98	□□□□□ -0.17
MRPL28-203	ENST00000429738	LIN7C	Q9NUP9	197 aa	Known RBP	13.98	□□□□□ -0.17
MRPL28-203	ENST00000429738	GNG12	Q9UBI6	72 aa		13.98	□□□□□ -0.17
MRPL28-203	ENST00000429738	UBE2QL1	A1L167	161 aa		13.97	□□□□□ -0.17
MRPL28-203	ENST00000429738	LINC01548	A6NM66	108 aa		13.97	□□□□□ -0.17
MRPL28-203	ENST00000429738	SERPINE3	A8MV23	424 aa		13.97	□□□□□ -0.17
MRPL28-203	ENST00000429738	PTGES3L	E9PB15	166 aa		13.97	□□□□□ -0.17
MRPL28-203	ENST00000429738		H0YHG0	523 aa		13.97	□□□□□ -0.17
MRPL28-203	ENST00000429738	DUS4L	O95620	317 aa	Known RBP	13.97	□□□□□ -0.17
MRPL28-203	ENST00000429738	UBB	P0CG47	229 aa		13.97	□□□□□ -0.17
MRPL28-203	ENST00000429738	RPL23A	P62750	156 aa	Known RBP	13.97	□□□□□ -0.17
MRPL28-203	ENST00000429738	SPHAR	Q15513	63 aa		13.97	□□□□□ -0.17
MRPL28-203	ENST00000429738	MORN2	Q502X0	79 aa		13.97	□□□□□ -0.17
MRPL28-203	ENST00000429738	KHDC1L	Q5JSQ8	128 aa		13.97	□□□□□ -0.17
MRPL28-203	ENST00000429738	ETV3L	Q6ZN32	361 aa		13.97	□□□□□ -0.17
MRPL28-203	ENST00000429738	STPG2	Q8N412	459 aa		13.97	□□□□□ -0.17
MRPL28-203	ENST00000429738	PRR18	Q8N4B5	295 aa		13.97	□□□□□ -0.17
MRPL28-203	ENST00000429738	OR10V1	Q8NGI7	309 aa		13.97	□□□□□ -0.17
MRPL28-203	ENST00000429738	NRG4	Q8WWG1	115 aa		13.97	□□□□□ -0.17
MRPL28-203	ENST00000429738	TAF9B	Q9HBM6	251 aa		13.97	□□□□□ -0.17
MRPL28-203	ENST00000429738	LINC00527	Q9UJ94	153 aa		13.97	□□□□□ -0.17
MRPL28-203	ENST00000429738	ZNF736	B4DX44	427 aa	Predicted RBP	13.96	□□□□□ -0.17
MRPL28-203	ENST00000429738	MOS	P00540	346 aa		13.96	□□□□□ -0.17
MRPL28-203	ENST00000429738	GPR12	P47775	334 aa		13.96	□□□□□ -0.17
MRPL28-203	ENST00000429738	AQP4	P55087	323 aa		13.96	□□□□□ -0.17
MRPL28-203	ENST00000429738	CD69	Q07108	199 aa		13.96	□□□□□ -0.17
MRPL28-203	ENST00000429738	GLT8D1	Q68CQ7	371 aa		13.96	□□□□□ -0.17
MRPL28-203	ENST00000429738	FOXRED2	Q8IWF2	684 aa		13.96	□□□□□ -0.17
MRPL28-203	ENST00000429738	FAM71E2	Q8N5Q1	922 aa		13.96	□□□□□ -0.17
MRPL28-203	ENST00000429738	COMMD1	Q8N668	190 aa		13.96	□□□□□ -0.17
MRPL28-203	ENST00000429738	LINC00482	Q8N8I6	264 aa		13.96	□□□□□ -0.17
MRPL28-203	ENST00000429738	TMED9	Q9BVK6	235 aa		13.96	□□□□□ -0.17
MRPL28-203	ENST00000429738	ZFP57	Q9NU63	452 aa		13.96	□□□□□ -0.17
MRPL28-203	ENST00000429738	NCBP2L	A6PVI3	153 aa	Known RBP	13.95	□□□□□ -0.18
MRPL28-203	ENST00000429738	AP4M1	O00189	453 aa		13.95	□□□□□ -0.18
MRPL28-203	ENST00000429738	LANCL1	O43813	399 aa		13.95	□□□□□ -0.18
MRPL28-203	ENST00000429738	UCHL1	P09936	223 aa		13.95	□□□□□ -0.18
MRPL28-203	ENST00000429738	SRM	P19623	302 aa		13.95	□□□□□ -0.18
MRPL28-203	ENST00000429738	CHAT	P28329	748 aa		13.95	□□□□□ -0.18
MRPL28-203	ENST00000429738	RPS27A	P62979	156 aa	Known RBP	13.95	□□□□□ -0.18
MRPL28-203	ENST00000429738	SLC35B1	P78383	322 aa		13.95	□□□□□ -0.18
MRPL28-203	ENST00000429738	QRFP	P83859	136 aa		13.95	□□□□□ -0.18
MRPL28-203	ENST00000429738	HTD2	P86397	168 aa		13.95	□□□□□ -0.18
MRPL28-203	ENST00000429738	EGFEM1P	Q0D2K5	195 aa		13.95	□□□□□ -0.18
MRPL28-203	ENST00000429738	RBM48	Q5RL73	367 aa	Known RBP	13.95	□□□□□ -0.18
MRPL28-203	ENST00000429738	LY6G6F	Q5SQ64	297 aa		13.95	□□□□□ -0.18
MRPL28-203	ENST00000429738	OR10K2	Q6IF99	312 aa		13.95	□□□□□ -0.18
MRPL28-203	ENST00000429738	OR2W3	Q7Z3T1	314 aa		13.95	□□□□□ -0.18
MRPL28-203	ENST00000429738	C5orf24	Q7Z6I8	188 aa		13.95	□□□□□ -0.18
MRPL28-203	ENST00000429738	OR8H1	Q8NGG4	311 aa		13.95	□□□□□ -0.18
MRPL28-203	ENST00000429738	S1PR3	Q99500	378 aa		13.95	□□□□□ -0.18
MRPL28-203	ENST00000429738	B9D2	Q9BPU9	175 aa		13.95	□□□□□ -0.18
MRPL28-203	ENST00000429738	SULT4A1	Q9BR01	284 aa		13.95	□□□□□ -0.18
MRPL28-203	ENST00000429738	TM2D1	Q9BX74	207 aa		13.95	□□□□□ -0.18
MRPL28-203	ENST00000429738	OR2S2	Q9NQN1	319 aa		13.95	□□□□□ -0.18
MRPL28-203	ENST00000429738	SCN3B	Q9NY72	215 aa		13.95	□□□□□ -0.18
MRPL28-203	ENST00000429738	JPT1	Q9UK76	154 aa		13.95	□□□□□ -0.18
MRPL28-203	ENST00000429738	TMEM14DP	A8MWL7	114 aa		13.94	□□□□□ -0.18
MRPL28-203	ENST00000429738	SLC22A1	O15245	554 aa		13.94	□□□□□ -0.18
MRPL28-203	ENST00000429738	YPEL1	O60688	119 aa		13.94	□□□□□ -0.18
MRPL28-203	ENST00000429738	SLC6A1	P30531	599 aa		13.94	□□□□□ -0.18
MRPL28-203	ENST00000429738	THBS3	P49746	956 aa		13.94	□□□□□ -0.18
MRPL28-203	ENST00000429738	UNC119	Q13432	240 aa		13.94	□□□□□ -0.18
MRPL28-203	ENST00000429738	GNMT	Q14749	295 aa		13.94	□□□□□ -0.18
MRPL28-203	ENST00000429738	MED22	Q15528	200 aa		13.94	□□□□□ -0.18
MRPL28-203	ENST00000429738	C18orf65	Q6ZTR6	163 aa		13.94	□□□□□ -0.18
MRPL28-203	ENST00000429738	CEACAM19	Q7Z692	300 aa		13.94	□□□□□ -0.18
MRPL28-203	ENST00000429738	MRPL41	Q8IXM3	137 aa	Known RBP	13.94	□□□□□ -0.18
MRPL28-203	ENST00000429738	ODF3L1	Q8IXM7	274 aa		13.94	□□□□□ -0.18
MRPL28-203	ENST00000429738	OR51D1	Q8NGF3	324 aa		13.94	□□□□□ -0.18
MRPL28-203	ENST00000429738	OR52L2P	Q8NGH6	319 aa		13.94	□□□□□ -0.18
MRPL28-203	ENST00000429738	YPEL2	Q96QA6	119 aa		13.94	□□□□□ -0.18
MRPL28-203	ENST00000429738	TMEM59	Q9BXS4	323 aa		13.94	□□□□□ -0.18
MRPL28-203	ENST00000429738	DUSP21	Q9H596	190 aa		13.94	□□□□□ -0.18
MRPL28-203	ENST00000429738	KCNIP1	Q9NZI2	227 aa		13.94	□□□□□ -0.18
MRPL28-203	ENST00000429738	HTR2C	P28335	458 aa		13.93	□□□□□ -0.18
MRPL28-203	ENST00000429738	F2RL1	P55085	397 aa		13.93	□□□□□ -0.18
MRPL28-203	ENST00000429738	LSAMP	Q13449	338 aa		13.93	□□□□□ -0.18
MRPL28-203	ENST00000429738	HMGN3	Q15651	99 aa		13.93	□□□□□ -0.18
MRPL28-203	ENST00000429738	HSD17B12	Q53GQ0	312 aa		13.93	□□□□□ -0.18
MRPL28-203	ENST00000429738	NKAPL	Q5M9Q1	402 aa		13.93	□□□□□ -0.18
MRPL28-203	ENST00000429738	KCNG3	Q8TAE7	436 aa		13.93	□□□□□ -0.18
MRPL28-203	ENST00000429738	RBMXL1	Q96E39	390 aa	Known RBP	13.93	□□□□□ -0.18
MRPL28-203	ENST00000429738	NEDD4L	Q96PU5	975 aa		13.93	□□□□□ -0.18
MRPL28-203	ENST00000429738	NICN1	Q9BSH3	213 aa		13.93	□□□□□ -0.18
MRPL28-203	ENST00000429738	ABHD14A	Q9BUJ0	271 aa		13.93	□□□□□ -0.18
MRPL28-203	ENST00000429738	NAPSA	O96009	420 aa		13.92	□□□□□ -0.18
MRPL28-203	ENST00000429738	MYF6	P23409	242 aa		13.92	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms