RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 Q8N6K4 173 aa14.55□□□□□ -0.08
PSPC1-202ENST00000427943 OR2T10Q8NGZ9 312 aa14.55□□□□□ -0.08
PSPC1-202ENST00000427943 CT45A3Q8NHU0 189 aa14.55□□□□□ -0.08
PSPC1-202ENST00000427943 MRPL30Q8TCC3 161 aaKnown RBP14.55□□□□□ -0.08
PSPC1-202ENST00000427943 MBNL3Q9NUK0 354 aaKnown RBP14.55□□□□□ -0.08
PSPC1-202ENST00000427943 LINC01548A6NM66 108 aa14.54□□□□□ -0.08
PSPC1-202ENST00000427943 IGHG2P01859 326 aa14.54□□□□□ -0.08
PSPC1-202ENST00000427943 GLAP06280 429 aa14.54□□□□□ -0.08
PSPC1-202ENST00000427943 UBBP0CG47 229 aa14.54□□□□□ -0.08
PSPC1-202ENST00000427943 CHATP28329 748 aa14.54□□□□□ -0.08
PSPC1-202ENST00000427943 C1orf100Q5SVJ3 147 aa14.54□□□□□ -0.08
PSPC1-202ENST00000427943 TGIF2LXQ8IUE1 241 aa14.54□□□□□ -0.08
PSPC1-202ENST00000427943 OR52L2PQ8NGH6 319 aa14.54□□□□□ -0.08
PSPC1-202ENST00000427943 CHPT1Q8WUD6 406 aa14.54□□□□□ -0.08
PSPC1-202ENST00000427943 PHYHIPQ92561 330 aa14.54□□□□□ -0.08
PSPC1-202ENST00000427943 UFD1Q92890 307 aa14.54□□□□□ -0.08
PSPC1-202ENST00000427943 TMEM203Q969S6 136 aa14.54□□□□□ -0.08
PSPC1-202ENST00000427943 SULT4A1Q9BR01 284 aa14.54□□□□□ -0.08
PSPC1-202ENST00000427943 NICN1Q9BSH3 213 aa14.54□□□□□ -0.08
PSPC1-202ENST00000427943 TMEM59Q9BXS4 323 aa14.54□□□□□ -0.08
PSPC1-202ENST00000427943 OR2S2Q9NQN1 319 aa14.54□□□□□ -0.08
PSPC1-202ENST00000427943 KCNIP1Q9NZI2 227 aa14.54□□□□□ -0.08
PSPC1-202ENST00000427943 UCHL1P09936 223 aa14.53□□□□□ -0.08
PSPC1-202ENST00000427943 HSMCR30P0CW71 290 aa14.53□□□□□ -0.08
PSPC1-202ENST00000427943 SRMP19623 302 aa14.53□□□□□ -0.08
PSPC1-202ENST00000427943 MYF6P23409 242 aa14.53□□□□□ -0.08
PSPC1-202ENST00000427943 CD1BP29016 333 aa14.53□□□□□ -0.08
PSPC1-202ENST00000427943 ZNF137PP52743 207 aa14.53□□□□□ -0.08
PSPC1-202ENST00000427943 RPS25P62851 125 aaKnown RBP14.53□□□□□ -0.08
PSPC1-202ENST00000427943 RPS27AP62979 156 aaKnown RBP14.53□□□□□ -0.08
PSPC1-202ENST00000427943 UNC119Q13432 240 aa14.53□□□□□ -0.08
PSPC1-202ENST00000427943 FOXB2Q5VYV0 432 aa14.53□□□□□ -0.08
PSPC1-202ENST00000427943 Q6ZPA2 131 aa14.53□□□□□ -0.08
PSPC1-202ENST00000427943 C6orf201Q7Z4U5 140 aa14.53□□□□□ -0.08
PSPC1-202ENST00000427943 FOXRED2Q8IWF2 684 aa14.53□□□□□ -0.08
PSPC1-202ENST00000427943 Q8N9W7 124 aa14.53□□□□□ -0.08
PSPC1-202ENST00000427943 NEDD4LQ96PU5 975 aa14.53□□□□□ -0.08
PSPC1-202ENST00000427943 NECAP2Q9NVZ3 263 aa14.53□□□□□ -0.08
PSPC1-202ENST00000427943 AURKAIP1Q9NWT8 199 aaPredicted RBP14.53□□□□□ -0.08
PSPC1-202ENST00000427943 TPRKBQ9Y3C4 175 aa14.53□□□□□ -0.08
PSPC1-202ENST00000427943 TXNL1O43396 289 aa14.52□□□□□ -0.09
PSPC1-202ENST00000427943 MOSP00540 346 aa14.52□□□□□ -0.09
PSPC1-202ENST00000427943 HTR2CP28335 458 aa14.52□□□□□ -0.09
PSPC1-202ENST00000427943 PPP1CCP36873 323 aaKnown RBP14.52□□□□□ -0.09
PSPC1-202ENST00000427943 MORN2Q502X0 79 aa14.52□□□□□ -0.09
PSPC1-202ENST00000427943 C18orf65Q6ZTR6 163 aa14.52□□□□□ -0.09
PSPC1-202ENST00000427943 REC114Q7Z4M0 266 aa14.52□□□□□ -0.09
PSPC1-202ENST00000427943 STPG2Q8N412 459 aa14.52□□□□□ -0.09
PSPC1-202ENST00000427943 WFDC9Q8NEX5 89 aa14.52□□□□□ -0.09
PSPC1-202ENST00000427943 MRAPQ8TCY5 172 aa14.52□□□□□ -0.09
PSPC1-202ENST00000427943 FAAP24Q9BTP7 215 aa14.52□□□□□ -0.09
PSPC1-202ENST00000427943 CCDC90BQ9GZT6 254 aa14.52□□□□□ -0.09
PSPC1-202ENST00000427943 ABCG5Q9H222 651 aa14.52□□□□□ -0.09
PSPC1-202ENST00000427943 LIN7CQ9NUP9 197 aaKnown RBP14.52□□□□□ -0.09
PSPC1-202ENST00000427943 SLC22A1O15245 554 aa14.51□□□□□ -0.09
PSPC1-202ENST00000427943 RGS10O43665 173 aa14.51□□□□□ -0.09
PSPC1-202ENST00000427943 GPR12P47775 334 aa14.51□□□□□ -0.09
PSPC1-202ENST00000427943 RPL23AP62750 156 aaKnown RBP14.51□□□□□ -0.09
PSPC1-202ENST00000427943 ETV3LQ6ZN32 361 aa14.51□□□□□ -0.09
PSPC1-202ENST00000427943 GFI1Q99684 422 aa14.51□□□□□ -0.09
PSPC1-202ENST00000427943 ABHD14AQ9BUJ0 271 aa14.51□□□□□ -0.09
PSPC1-202ENST00000427943 ANKRD60Q9BZ19 345 aa14.51□□□□□ -0.09
PSPC1-202ENST00000427943 DUSP21Q9H596 190 aa14.51□□□□□ -0.09
PSPC1-202ENST00000427943 JPT1Q9UK76 154 aa14.51□□□□□ -0.09
PSPC1-202ENST00000427943 DNAH3Q8TD57 4116 aa14.51□□□□□ -0.09
PSPC1-202ENST00000427943 A0A0A6YYD4 124 aa14.5□□□□□ -0.09
PSPC1-202ENST00000427943 TMEM14DPA8MWL7 114 aa14.5□□□□□ -0.09
PSPC1-202ENST00000427943 NUDT19A8MXV4 375 aa14.5□□□□□ -0.09
PSPC1-202ENST00000427943 LANCL1O43813 399 aa14.5□□□□□ -0.09
PSPC1-202ENST00000427943 SLC35B1P78383 322 aa14.5□□□□□ -0.09
PSPC1-202ENST00000427943 LSAMPQ13449 338 aa14.5□□□□□ -0.09
PSPC1-202ENST00000427943 P2RY14Q15391 338 aa14.5□□□□□ -0.09
PSPC1-202ENST00000427943 TMEM91Q6ZNR0 172 aa14.5□□□□□ -0.09
PSPC1-202ENST00000427943 C8orf86Q6ZUL3 223 aa14.5□□□□□ -0.09
PSPC1-202ENST00000427943 OR2W3Q7Z3T1 314 aa14.5□□□□□ -0.09
PSPC1-202ENST00000427943 ZNF554Q86TJ5 538 aa14.5□□□□□ -0.09
PSPC1-202ENST00000427943 OR6M1Q8NGM8 313 aa14.5□□□□□ -0.09
PSPC1-202ENST00000427943 KCNG3Q8TAE7 436 aa14.5□□□□□ -0.09
PSPC1-202ENST00000427943 S1PR3Q99500 378 aa14.5□□□□□ -0.09
PSPC1-202ENST00000427943 RASL11BQ9BPW5 248 aa14.5□□□□□ -0.09
PSPC1-202ENST00000427943 HSPB9Q9BQS6 159 aa14.5□□□□□ -0.09
PSPC1-202ENST00000427943 TM2D1Q9BX74 207 aa14.5□□□□□ -0.09
PSPC1-202ENST00000427943 PLSCR3Q9NRY6 295 aa14.5□□□□□ -0.09
PSPC1-202ENST00000427943 AP4M1O00189 453 aa14.49□□□□□ -0.09
PSPC1-202ENST00000427943 CRHBPP24387 322 aa14.49□□□□□ -0.09
PSPC1-202ENST00000427943 BLVRBP30043 206 aaPredicted RBP14.49□□□□□ -0.09
PSPC1-202ENST00000427943 MAP2K4P45985 399 aa14.49□□□□□ -0.09
PSPC1-202ENST00000427943 F2RL1P55085 397 aa14.49□□□□□ -0.09
PSPC1-202ENST00000427943 QRFPP83859 136 aa14.49□□□□□ -0.09
PSPC1-202ENST00000427943 TPBGQ13641 420 aa14.49□□□□□ -0.09
PSPC1-202ENST00000427943 HMGN3Q15651 99 aa14.49□□□□□ -0.09
PSPC1-202ENST00000427943 IZUMO2Q6UXV1 221 aa14.49□□□□□ -0.09
PSPC1-202ENST00000427943 ODF3L1Q8IXM7 274 aa14.49□□□□□ -0.09
PSPC1-202ENST00000427943 SVOPQ8N4V2 548 aa14.49□□□□□ -0.09
PSPC1-202ENST00000427943 FAM71E2Q8N5Q1 922 aa14.49□□□□□ -0.09
PSPC1-202ENST00000427943 LINC00482Q8N8I6 264 aa14.49□□□□□ -0.09
PSPC1-202ENST00000427943 KLHL30-AS1Q8NEE0 82 aa14.49□□□□□ -0.09
PSPC1-202ENST00000427943 SETD6Q8TBK2 473 aa14.49□□□□□ -0.09
PSPC1-202ENST00000427943 GALMQ96C23 342 aa14.49□□□□□ -0.09
PSPC1-202ENST00000427943 MRPL20Q9BYC9 149 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms