RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 GALNT14Q96FL9 552 aa11.33□□□□□ -0.6
MCF2L-213ENST00000421756 SVEP1Q4LDE5 3571 aa11.33□□□□□ -0.6
MCF2L-213ENST00000421756 KIR2DS1A0A191URI9 304 aa11.32□□□□□ -0.6
MCF2L-213ENST00000421756 PSPNO60542 156 aa11.32□□□□□ -0.6
MCF2L-213ENST00000421756 CLDN1O95832 211 aa11.32□□□□□ -0.6
MCF2L-213ENST00000421756 ZNF14P17017 642 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-213ENST00000421756 G6PCP35575 357 aa11.32□□□□□ -0.6
MCF2L-213ENST00000421756 PMELP40967 661 aa11.32□□□□□ -0.6
MCF2L-213ENST00000421756 ECI1P42126 302 aa11.32□□□□□ -0.6
MCF2L-213ENST00000421756 KIR2DS4P43632 304 aa11.32□□□□□ -0.6
MCF2L-213ENST00000421756 P2RY1P47900 373 aa11.32□□□□□ -0.6
MCF2L-213ENST00000421756 DVL1P1P54792 670 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-213ENST00000421756 KIR2DS1Q14954 304 aa11.32□□□□□ -0.6
MCF2L-213ENST00000421756 ZNF674Q2M3X9 581 aa11.32□□□□□ -0.6
MCF2L-213ENST00000421756 IL34Q6ZMJ4 242 aa11.32□□□□□ -0.6
MCF2L-213ENST00000421756 DDA1Q9BW61 102 aa11.32□□□□□ -0.6
MCF2L-213ENST00000421756 PLK3Q9H4B4 646 aa11.32□□□□□ -0.6
MCF2L-213ENST00000421756 VSIRQ9H7M9 311 aa11.32□□□□□ -0.6
MCF2L-213ENST00000421756 ATP23Q9Y6H3 246 aa11.32□□□□□ -0.6
MCF2L-213ENST00000421756 CHD3Q12873 2000 aaKnown RBP11.32□□□□□ -0.6
MCF2L-213ENST00000421756 CD55P08174 381 aa11.32□□□□□ -0.6
MCF2L-213ENST00000421756 H2AFB1P0C5Y9 115 aa11.32□□□□□ -0.6
MCF2L-213ENST00000421756 CTRB1P17538 263 aa11.32□□□□□ -0.6
MCF2L-213ENST00000421756 SSTR5P35346 364 aa11.32□□□□□ -0.6
MCF2L-213ENST00000421756 SOHLH1Q5JUK2 328 aa11.32□□□□□ -0.6
MCF2L-213ENST00000421756 CTRB2Q6GPI1 263 aa11.32□□□□□ -0.6
MCF2L-213ENST00000421756 ZNF343Q6P1L6 599 aa11.32□□□□□ -0.6
MCF2L-213ENST00000421756 SEC11CQ9BY50 192 aa11.32□□□□□ -0.6
MCF2L-213ENST00000421756 POMT1Q9Y6A1 747 aa11.32□□□□□ -0.6
MCF2L-213ENST00000421756 RAMP3O60896 148 aa11.32□□□□□ -0.6
MCF2L-213ENST00000421756 CYC1P08574 325 aa11.32□□□□□ -0.6
MCF2L-213ENST00000421756 COLCA1Q6ZS62 124 aa11.32□□□□□ -0.6
MCF2L-213ENST00000421756 RPRMLQ8N4K4 120 aa11.32□□□□□ -0.6
MCF2L-213ENST00000421756 OR2D2Q9H210 308 aa11.32□□□□□ -0.6
MCF2L-213ENST00000421756 PLXNB1O43157 2135 aa11.32□□□□□ -0.6
MCF2L-213ENST00000421756 ZNF806P0C7X5 589 aa11.31□□□□□ -0.6
MCF2L-213ENST00000421756 F2RP25116 425 aa11.31□□□□□ -0.6
MCF2L-213ENST00000421756 S100GP29377 79 aa11.31□□□□□ -0.6
MCF2L-213ENST00000421756 ZNF83P51522 516 aa11.31□□□□□ -0.6
MCF2L-213ENST00000421756 TESK1Q15569 626 aa11.31□□□□□ -0.6
MCF2L-213ENST00000421756 OR2W1Q9Y3N9 320 aa11.31□□□□□ -0.6
MCF2L-213ENST00000421756 OR5H1A6NKK0 313 aa11.31□□□□□ -0.6
MCF2L-213ENST00000421756 C21orf140B9A014 251 aa11.31□□□□□ -0.6
MCF2L-213ENST00000421756 SNCAP37840 140 aa11.31□□□□□ -0.6
MCF2L-213ENST00000421756 EDDM3BP56851 147 aa11.31□□□□□ -0.6
MCF2L-213ENST00000421756 RNPS1Q15287 305 aaKnown RBP11.31□□□□□ -0.6
MCF2L-213ENST00000421756 HFEQ30201 348 aa11.31□□□□□ -0.6
MCF2L-213ENST00000421756 PEAR1Q5VY43 1037 aaPredicted RBP11.31□□□□□ -0.6
MCF2L-213ENST00000421756 SLC16A13Q7RTY0 426 aa11.31□□□□□ -0.6
MCF2L-213ENST00000421756 UBAC2Q8NBM4 344 aa11.31□□□□□ -0.6
MCF2L-213ENST00000421756 SAT2Q96F10 170 aaPredicted RBP11.31□□□□□ -0.6
MCF2L-213ENST00000421756 CSMD1Q96PZ7 3565 aa11.31□□□□□ -0.6
MCF2L-213ENST00000421756 NAPSAO96009 420 aa11.31□□□□□ -0.6
MCF2L-213ENST00000421756 COL8A2P25067 703 aa11.31□□□□□ -0.6
MCF2L-213ENST00000421756 AVPI1Q5T686 147 aa11.31□□□□□ -0.6
MCF2L-213ENST00000421756 PCSK4Q6UW60 755 aa11.31□□□□□ -0.6
MCF2L-213ENST00000421756 ASCL4Q6XD76 172 aa11.31□□□□□ -0.6
MCF2L-213ENST00000421756 VKORC1L1Q8N0U8 176 aa11.31□□□□□ -0.6
MCF2L-213ENST00000421756 BCL2L2Q92843 193 aaPredicted RBP11.31□□□□□ -0.6
MCF2L-213ENST00000421756 SPSB4Q96A44 273 aa11.31□□□□□ -0.6
MCF2L-213ENST00000421756 SPRY4Q9C004 299 aa11.31□□□□□ -0.6
MCF2L-213ENST00000421756 ZNF391Q9UJN7 358 aa11.31□□□□□ -0.6
MCF2L-213ENST00000421756 LRBAP50851 2863 aa11.31□□□□□ -0.6
MCF2L-213ENST00000421756 ASH1LQ9NR48 2969 aaKnown RBP11.3□□□□□ -0.6
MCF2L-213ENST00000421756 IGKV3D-15A0A087WSY6 115 aa11.3□□□□□ -0.6
MCF2L-213ENST00000421756 DANCRP0C864 163 aa11.3□□□□□ -0.6
MCF2L-213ENST00000421756 VDAC1P21796 283 aa11.3□□□□□ -0.6
MCF2L-213ENST00000421756 RPS10P46783 165 aaKnown RBP11.3□□□□□ -0.6
MCF2L-213ENST00000421756 GLIPR1P48060 266 aa11.3□□□□□ -0.6
MCF2L-213ENST00000421756 RAB11AP62491 216 aa11.3□□□□□ -0.6
MCF2L-213ENST00000421756 TGFBR3Q03167 851 aa11.3□□□□□ -0.6
MCF2L-213ENST00000421756 C4orf17Q53FE4 359 aa11.3□□□□□ -0.6
MCF2L-213ENST00000421756 RBMS3Q6XE24 437 aaKnown RBP11.3□□□□□ -0.6
MCF2L-213ENST00000421756 OR2Z1Q8NG97 314 aa11.3□□□□□ -0.6
MCF2L-213ENST00000421756 OR4D5Q8NGN0 318 aa11.3□□□□□ -0.6
MCF2L-213ENST00000421756 KLF14Q8TD94 323 aaPredicted RBP11.3□□□□□ -0.6
MCF2L-213ENST00000421756 NANOS1Q8WY41 292 aaKnown RBP11.3□□□□□ -0.6
MCF2L-213ENST00000421756 RTL8AQ9BWD3 113 aa11.3□□□□□ -0.6
MCF2L-213ENST00000421756 PARP11Q9NR21 331 aa11.3□□□□□ -0.6
MCF2L-213ENST00000421756 ST8SIA5O15466 376 aa11.3□□□□□ -0.6
MCF2L-213ENST00000421756 TMEM178AQ8NBL3 297 aa11.3□□□□□ -0.6
MCF2L-213ENST00000421756 TMEM45BQ96B21 275 aa11.3□□□□□ -0.6
MCF2L-213ENST00000421756 HINT2Q9BX68 163 aa11.3□□□□□ -0.6
MCF2L-213ENST00000421756 PLEKHF2Q9H8W4 249 aa11.3□□□□□ -0.6
MCF2L-213ENST00000421756 CLN8Q9UBY8 286 aa11.3□□□□□ -0.6
MCF2L-213ENST00000421756 RALYQ9UKM9 306 aaKnown RBP11.3□□□□□ -0.6
MCF2L-213ENST00000421756 UBE2L5PA0A1B0GUS4 154 aa11.29□□□□□ -0.6
MCF2L-213ENST00000421756 UCP2P55851 309 aa11.29□□□□□ -0.6
MCF2L-213ENST00000421756 RPL23AP62750 156 aaKnown RBP11.29□□□□□ -0.6
MCF2L-213ENST00000421756 STX12Q86Y82 276 aa11.29□□□□□ -0.6
MCF2L-213ENST00000421756 C9orf106Q8NAJ2 232 aa11.29□□□□□ -0.6
MCF2L-213ENST00000421756 SDSLQ96GA7 329 aa11.29□□□□□ -0.6
MCF2L-213ENST00000421756 SPIN2AQ99865 258 aa11.29□□□□□ -0.6
MCF2L-213ENST00000421756 SPIN2BQ9BPZ2 258 aa11.29□□□□□ -0.6
MCF2L-213ENST00000421756 AURKAIP1Q9NWT8 199 aaPredicted RBP11.29□□□□□ -0.6
MCF2L-213ENST00000421756 HEXAP06865 529 aa11.29□□□□□ -0.6
MCF2L-213ENST00000421756 LYL1P12980 280 aa11.29□□□□□ -0.6
MCF2L-213ENST00000421756 NQO2P16083 231 aa11.29□□□□□ -0.6
MCF2L-213ENST00000421756 MRPL49Q13405 166 aaKnown RBP11.29□□□□□ -0.6
MCF2L-213ENST00000421756 IL13RA2Q14627 380 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms