RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 SLC2A2P11168 524 aaPredicted RBP11.28□□□□□ -0.6
PAF1-202ENST00000416728 RCC1P18754 421 aaPredicted RBP11.28□□□□□ -0.6
PAF1-202ENST00000416728 PSMB8P28062 276 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 VHLP40337 213 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 ECI1P42126 302 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 RPS11P62280 158 aaKnown RBP eCLIP11.28□□□□□ -0.6
PAF1-202ENST00000416728 LSAMPQ13449 338 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 MMDQ15546 238 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 STEAP3Q658P3 488 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 GAPTQ8N292 157 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 ZFP41Q8N8Y5 198 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 RBMXL1Q96E39 390 aaKnown RBP11.28□□□□□ -0.6
PAF1-202ENST00000416728 PGLYRP3Q96LB9 341 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 KCTD7Q96MP8 289 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 OR14A2Q96R54 314 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 PRR25Q96S07 402 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 BANF2Q9H503 90 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 OR2S2Q9NQN1 319 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 ZNF580Q9UK33 172 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 LSM4Q9Y4Z0 139 aaKnown RBP11.28□□□□□ -0.6
PAF1-202ENST00000416728 U3KQK5 164 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 DNAH9Q9NYC9 4486 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 A0A1W2PPK0 400 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 FAM90A10PA6NDY2 464 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 FAM90A7PA6NKC0 464 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 FAM90A23PA8MXZ1 464 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 BAG2O95816 211 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 MGMTP16455 207 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 MYF6P23409 242 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 FHL3Q13643 280 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 CDH26Q8IXH8 852 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 TMEM80Q96HE8 168 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 SELENOIQ9C0D9 397 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 TAF9BQ9HBM6 251 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 KCNIP1Q9NZI2 227 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 COL7A1Q02388 2944 aa11.27□□□□□ -0.61
PAF1-202ENST00000416728 TRBV5-7A0A0A0MS05 114 aa11.27□□□□□ -0.61
PAF1-202ENST00000416728 CRTAPO75718 401 aaPredicted RBP11.27□□□□□ -0.61
PAF1-202ENST00000416728 SC5DO75845 299 aa11.27□□□□□ -0.61
PAF1-202ENST00000416728 MAS1P04201 325 aa11.27□□□□□ -0.61
PAF1-202ENST00000416728 GLAP06280 429 aa11.27□□□□□ -0.61
PAF1-202ENST00000416728 FUT3P21217 361 aa11.27□□□□□ -0.61
PAF1-202ENST00000416728 TAS2R43P59537 309 aa11.27□□□□□ -0.61
PAF1-202ENST00000416728 ADARB1P78563 741 aaKnown RBP11.27□□□□□ -0.61
PAF1-202ENST00000416728 ZNF260Q3ZCT1 412 aa11.27□□□□□ -0.61
PAF1-202ENST00000416728 MORN2Q502X0 79 aa11.27□□□□□ -0.61
PAF1-202ENST00000416728 TMEM65Q6PI78 240 aa11.27□□□□□ -0.61
PAF1-202ENST00000416728 OR11H1Q8NG94 326 aa11.27□□□□□ -0.61
PAF1-202ENST00000416728 CHCHD6Q9BRQ6 235 aa11.27□□□□□ -0.61
PAF1-202ENST00000416728 ABHD14AQ9BUJ0 271 aa11.27□□□□□ -0.61
PAF1-202ENST00000416728 SCOCQ9UIL1 159 aa11.27□□□□□ -0.61
PAF1-202ENST00000416728 PNMA8CA0A1B0GUJ8 204 aa11.26□□□□□ -0.61
PAF1-202ENST00000416728 UBE2QL1A1L167 161 aa11.26□□□□□ -0.61
PAF1-202ENST00000416728 CAPGP40121 348 aa11.26□□□□□ -0.61
PAF1-202ENST00000416728 ACTBP60709 375 aa11.26□□□□□ -0.61
PAF1-202ENST00000416728 GNMTQ14749 295 aa11.26□□□□□ -0.61
PAF1-202ENST00000416728 ZNF554Q86TJ5 538 aa11.26□□□□□ -0.61
PAF1-202ENST00000416728 ZNF485Q8NCK3 441 aa11.26□□□□□ -0.61
PAF1-202ENST00000416728 SETD9Q8NE22 299 aa11.26□□□□□ -0.61
PAF1-202ENST00000416728 MYOZ3Q8TDC0 251 aa11.26□□□□□ -0.61
PAF1-202ENST00000416728 CYGBQ8WWM9 190 aa11.26□□□□□ -0.61
PAF1-202ENST00000416728 UBE2E2Q96LR5 201 aa11.26□□□□□ -0.61
PAF1-202ENST00000416728 Q96M66 194 aa11.26□□□□□ -0.61
PAF1-202ENST00000416728 ZNF251Q9BRH9 671 aa11.26□□□□□ -0.61
PAF1-202ENST00000416728 MBNL3Q9NUK0 354 aaKnown RBP11.26□□□□□ -0.61
PAF1-202ENST00000416728 JPT1Q9UK76 154 aa11.26□□□□□ -0.61
PAF1-202ENST00000416728 WSB1Q9Y6I7 421 aa11.26□□□□□ -0.61
PAF1-202ENST00000416728 TENM3Q9P273 2699 aa11.25□□□□□ -0.61
PAF1-202ENST00000416728 PDCD6O75340 191 aa11.25□□□□□ -0.61
PAF1-202ENST00000416728 OR8U8P0C7N1 319 aa11.25□□□□□ -0.61
PAF1-202ENST00000416728 PPIFP30405 207 aaKnown RBP11.25□□□□□ -0.61
PAF1-202ENST00000416728 PPP1CCP36873 323 aaKnown RBP11.25□□□□□ -0.61
PAF1-202ENST00000416728 GABPB1Q06547 395 aaPredicted RBP11.25□□□□□ -0.61
PAF1-202ENST00000416728 ST3GAL4Q11206 333 aa11.25□□□□□ -0.61
PAF1-202ENST00000416728 DOC2BQ14184 412 aa11.25□□□□□ -0.61
PAF1-202ENST00000416728 TTC23Q5W5X9 447 aa11.25□□□□□ -0.61
PAF1-202ENST00000416728 SIGIRRQ6IA17 410 aa11.25□□□□□ -0.61
PAF1-202ENST00000416728 NKAIN3Q8N8D7 197 aa11.25□□□□□ -0.61
PAF1-202ENST00000416728 OR52L2PQ8NGH6 319 aa11.25□□□□□ -0.61
PAF1-202ENST00000416728 DERL3Q96Q80 235 aa11.25□□□□□ -0.61
PAF1-202ENST00000416728 MRPL20Q9BYC9 149 aaKnown RBP11.25□□□□□ -0.61
PAF1-202ENST00000416728 KLK15Q9H2R5 256 aa11.25□□□□□ -0.61
PAF1-202ENST00000416728 OR51J1Q9H342 316 aa11.25□□□□□ -0.61
PAF1-202ENST00000416728 PARP11Q9NR21 331 aa11.25□□□□□ -0.61
PAF1-202ENST00000416728 VSIG4Q9Y279 399 aa11.25□□□□□ -0.61
PAF1-202ENST00000416728 ZNF256Q9Y2P7 627 aaPredicted RBP11.25□□□□□ -0.61
PAF1-202ENST00000416728 G3V318 75 aa11.24□□□□□ -0.61
PAF1-202ENST00000416728 ATP6V0E1O15342 81 aa11.24□□□□□ -0.61
PAF1-202ENST00000416728 RGS11O94810 467 aa11.24□□□□□ -0.61
PAF1-202ENST00000416728 HLA-DRB1P01911 266 aa11.24□□□□□ -0.61
PAF1-202ENST00000416728 INSL3P51460 131 aa11.24□□□□□ -0.61
PAF1-202ENST00000416728 HTD2P86397 168 aa11.24□□□□□ -0.61
PAF1-202ENST00000416728 ZNF616Q08AN1 781 aa11.24□□□□□ -0.61
PAF1-202ENST00000416728 NKAPLQ5M9Q1 402 aa11.24□□□□□ -0.61
PAF1-202ENST00000416728 LYPD6Q86Y78 171 aa11.24□□□□□ -0.61
PAF1-202ENST00000416728 ODF3L1Q8IXM7 274 aa11.24□□□□□ -0.61
PAF1-202ENST00000416728 ZNF491Q8N8L2 437 aa11.24□□□□□ -0.61
PAF1-202ENST00000416728 OR1N2Q8NGR9 330 aa11.24□□□□□ -0.61
PAF1-202ENST00000416728 MRPL30Q8TCC3 161 aaKnown RBP11.24□□□□□ -0.61
PAF1-202ENST00000416728 THRSPQ92748 146 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms