RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 PRR19A6NJB7 356 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 MSTNO14793 375 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 CELA2AP08217 269 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 SP9P0CG40 484 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 BIDP55957 195 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 MGAT2Q10469 447 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 ACKR1Q16570 336 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 LINC00346Q8IVM7 164 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 TRIOO75962 3097 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 TRAV34A0A0B4J273 112 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 MT-CO3P00414 261 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 PPP1CBP62140 327 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 ARG2P78540 354 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 MRPS34P82930 218 aaKnown RBP6.78□□□□□ -1.32
SIK3-203ENST00000415541 EXT1Q16394 746 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 C9orf135Q5VTT2 229 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 SAMD13Q5VXD3 122 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 C1orf174Q8IYL3 243 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 TMEM256Q8N2U0 113 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 OR52L2PQ8NGH6 319 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 LIN37Q96GY3 246 aaPredicted RBP6.78□□□□□ -1.32
SIK3-203ENST00000415541 WDYHV1Q96HA8 205 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 CLUHP3Q96NS8 147 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 GPX7Q96SL4 187 aaPredicted RBP6.78□□□□□ -1.32
SIK3-203ENST00000415541 PPIAL4AQ9Y536 164 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 POLEQ07864 2286 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 IGHV1-69-2A0A0G2JMI3 117 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 SPAARA0A1B0GVQ0 90 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 SERPINE3A8MV23 424 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 OR7C2O60412 319 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 VSIG8P0DPA2 414 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 OMGP23515 440 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 SHBQ15464 509 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 ZNF141Q15928 474 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 AGMATQ9BSE5 352 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 LRFN3Q9BTN0 628 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 ZDHHC11Q9H8X9 412 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 B4GALT7Q9UBV7 327 aa6.78□□□□□ -1.32
SIK3-203ENST00000415541 LOC102724200A0A096LPH7 203 aaPredicted RBP6.77□□□□□ -1.33
SIK3-203ENST00000415541 FAM24AA6NFZ4 105 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 CRYM-AS1A6NIL9 109 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 OR5B21A6NL26 309 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 CYB561P49447 251 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 CCL11P51671 97 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 BAXQ07812 192 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 FHL5Q5TD97 284 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 HES3Q5TGS1 186 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 ZNF468Q5VIY5 522 aaPredicted RBP6.77□□□□□ -1.33
SIK3-203ENST00000415541 FAM180AQ6UWF9 173 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 OR5D14Q8NGL3 314 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 ZNF721Q8TF20 911 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 SPACA9Q96E40 222 aaPredicted RBP6.77□□□□□ -1.33
SIK3-203ENST00000415541 TMEM59Q9BXS4 323 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 LOC107986453A0A1B0GWG9 222 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 A0A1W2PNV4 684 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 OR6C6A6NF89 314 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 KBTBD11O94819 623 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 CDS2O95674 445 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 CRISP2P16562 243 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 GZMHP20718 246 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 ASCL1P50553 236 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 CLDN17P56750 224 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 RIPPLY3P57055 190 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 TAS2R30P59541 319 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 PLPPR5Q32ZL2 321 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 LCN15Q6UWW0 184 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 ABHD12BQ7Z5M8 362 aaPredicted RBP6.77□□□□□ -1.33
SIK3-203ENST00000415541 S100A7AQ86SG5 101 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 PINX1Q96BK5 328 aaKnown RBP6.77□□□□□ -1.33
SIK3-203ENST00000415541 SGCZQ96LD1 299 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 ANAPC10Q9UM13 185 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 FANCMQ8IYD8 2048 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 IGHV3-15A0A0B4J1V0 119 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 ALG1L2C9J202 215 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 F5H5K5 113 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 IGHV3-9P01782 118 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 IGLC2P0DOY2 106 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 IGLC3P0DOY3 106 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 ZNF20P17024 532 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 NKX2-1P43699 371 aaPredicted RBP6.77□□□□□ -1.33
SIK3-203ENST00000415541 PSMB3P49720 205 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 DAP3P51398 398 aaKnown RBP6.77□□□□□ -1.33
SIK3-203ENST00000415541 SRPXP78539 464 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 FHL1Q13642 323 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 TRIP6Q15654 476 aaKnown RBP6.77□□□□□ -1.33
SIK3-203ENST00000415541 PRSS8Q16651 343 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 PCK2Q16822 640 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.77□□□□□ -1.33
SIK3-203ENST00000415541 TDRG1Q3Y452 100 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 TMEM108Q6UXF1 575 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 CCDC71LQ8N9Z2 235 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 OR5C1Q8NGR4 320 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 TMEM56Q96MV1 263 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 CALHM2Q9HA72 323 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 MMP25Q9NPA2 562 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 PLA2G3Q9NZ20 509 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 FBLN5Q9UBX5 448 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 COA3Q9Y2R0 106 aaPredicted RBP6.77□□□□□ -1.33
SIK3-203ENST00000415541 TMEM56-RWDD3S4R434 201 aa6.77□□□□□ -1.33
SIK3-203ENST00000415541 CORTO00230 105 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms