RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 CT55Q8WUE5 264 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 SGK494Q96LW2 274 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 GPX7Q96SL4 187 aaPredicted RBP8.05□□□□□ -1.12
SNHG3-201ENST00000413987 GOLT1BQ9Y3E0 138 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 CHEK1O14757 476 aa8.04□□□□□ -1.12
SNHG3-201ENST00000413987 JTBO76095 146 aa8.04□□□□□ -1.12
SNHG3-201ENST00000413987 LIPCP11150 499 aa8.04□□□□□ -1.12
SNHG3-201ENST00000413987 AKR1C4P17516 323 aa8.04□□□□□ -1.12
SNHG3-201ENST00000413987 NDUFB7P17568 137 aa8.04□□□□□ -1.12
SNHG3-201ENST00000413987 RAB6AP20340 208 aa8.04□□□□□ -1.12
SNHG3-201ENST00000413987 GRPRP30550 384 aa8.04□□□□□ -1.12
SNHG3-201ENST00000413987 TLE4Q04727 773 aa8.04□□□□□ -1.12
SNHG3-201ENST00000413987 TIMM23BQ5SRD1 257 aa8.04□□□□□ -1.12
SNHG3-201ENST00000413987 HIST2H3PS2Q5TEC6 136 aa8.04□□□□□ -1.12
SNHG3-201ENST00000413987 LEG1Q6P5S2 330 aa8.04□□□□□ -1.12
SNHG3-201ENST00000413987 Q6ZRG5 221 aa8.04□□□□□ -1.12
SNHG3-201ENST00000413987 HSD17B11Q8NBQ5 300 aa8.04□□□□□ -1.12
SNHG3-201ENST00000413987 APCDD1LQ8NCL9 501 aa8.04□□□□□ -1.12
SNHG3-201ENST00000413987 OR6N2Q8NGY6 317 aa8.04□□□□□ -1.12
SNHG3-201ENST00000413987 APH1AQ96BI3 265 aa8.04□□□□□ -1.12
SNHG3-201ENST00000413987 WDYHV1Q96HA8 205 aa8.04□□□□□ -1.12
SNHG3-201ENST00000413987 NOL4LQ96MY1 436 aaPredicted RBP8.04□□□□□ -1.12
SNHG3-201ENST00000413987 KLK13Q9UKR3 277 aa8.04□□□□□ -1.12
SNHG3-201ENST00000413987 PSMB11A5LHX3 300 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 H0YIZ8 118 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 AGPAT2O15120 278 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 YIF1AO95070 293 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 CSN2P05814 226 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 CD37P11049 281 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 SPINK2P20155 84 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 SSTR5P35346 364 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 SNCAP37840 140 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 RAP1AP62834 184 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 SKP2Q13309 424 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 EBPQ15125 230 aaKnown RBP8.03□□□□□ -1.12
SNHG3-201ENST00000413987 TMEM128Q5BJH2 165 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 OPN5Q6U736 354 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 HEPN1Q6WQI6 88 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 ZNF550Q7Z398 422 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 MDGA2Q7Z553 956 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 APRG1Q8IVJ8 170 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 PLPP5Q8NEB5 264 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 OR4C3Q8NH37 302 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 C4orf45Q96LM5 186 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 IP6K3Q96PC2 410 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 SCGB3A2Q96PL1 93 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 PBDC1Q9BVG4 233 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 SMDT1Q9H4I9 107 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 UBQLN4Q9NRR5 601 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 DLL3Q9NYJ7 618 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 TP53TG5Q9Y2B4 290 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 hCG_38984A0A1B0GV85 526 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 A0A1W2PRD5 423 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 PROB1E7EW31 1015 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 NPIPA5E9PKD4 350 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 NPIPA3F8WFD2 350 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 DCTN6O00399 190 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 VCYO14598 125 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 GFRA3O60609 400 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 NGFRP08138 427 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 RPS10P46783 165 aaKnown RBP8.03□□□□□ -1.12
SNHG3-201ENST00000413987 NDUFA6P56556 154 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 UBAC2Q8NBM4 344 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 OR1F12Q8NHA8 337 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 RNF128Q8TEB7 428 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 AQP3Q92482 292 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 C2orf50Q96LR7 162 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 ADOQ96SZ5 270 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 SPRY4Q9C004 299 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 KCNJ16Q9NPI9 418 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 NPIPA1Q9UND3 350 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 HS3ST3B1Q9Y662 390 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 DSPP15924 2871 aaKnown RBP8.03□□□□□ -1.12
SNHG3-201ENST00000413987 PTPRBP23467 1997 aa8.03□□□□□ -1.12
SNHG3-201ENST00000413987 CNTRLQ7Z7A1 2325 aa8.02□□□□□ -1.13
SNHG3-201ENST00000413987 LOC101059948A0A1B0GTJ6 334 aa8.02□□□□□ -1.13
SNHG3-201ENST00000413987 A0A1B0GUS0 222 aa8.02□□□□□ -1.13
SNHG3-201ENST00000413987 MSGN1A6NI15 193 aa8.02□□□□□ -1.13
SNHG3-201ENST00000413987 UMAD1C9J7I0 102 aa8.02□□□□□ -1.13
SNHG3-201ENST00000413987 SFT2D2O95562 160 aa8.02□□□□□ -1.13
SNHG3-201ENST00000413987 CYB5R3P00387 301 aaPredicted RBP8.02□□□□□ -1.13
SNHG3-201ENST00000413987 IFI6P09912 130 aa8.02□□□□□ -1.13
SNHG3-201ENST00000413987 OR8U9P0C7N5 309 aa8.02□□□□□ -1.13
SNHG3-201ENST00000413987 KITLGP21583 273 aa8.02□□□□□ -1.13
SNHG3-201ENST00000413987 CEACAM6P40199 344 aa8.02□□□□□ -1.13
SNHG3-201ENST00000413987 KIR2DL2P43627 348 aaPredicted RBP8.02□□□□□ -1.13
SNHG3-201ENST00000413987 RSU1Q15404 277 aa8.02□□□□□ -1.13
SNHG3-201ENST00000413987 TMEM176BQ3YBM2 270 aaPredicted RBP8.02□□□□□ -1.13
SNHG3-201ENST00000413987 PDZD11Q5EBL8 140 aa8.02□□□□□ -1.13
SNHG3-201ENST00000413987 ATP1A1-AS1Q5TC04 95 aa8.02□□□□□ -1.13
SNHG3-201ENST00000413987 TMEM268Q5VZI3 342 aa8.02□□□□□ -1.13
SNHG3-201ENST00000413987 KIRREL2Q6UWL6 708 aa8.02□□□□□ -1.13
SNHG3-201ENST00000413987 SSX7Q7RTT5 188 aa8.02□□□□□ -1.13
SNHG3-201ENST00000413987 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.02□□□□□ -1.13
SNHG3-201ENST00000413987 ADAD2Q8NCV1 583 aaKnown RBP8.02□□□□□ -1.13
SNHG3-201ENST00000413987 NFAM1Q8NET5 270 aaPredicted RBP8.02□□□□□ -1.13
SNHG3-201ENST00000413987 OR2Y1Q8NGV0 311 aa8.02□□□□□ -1.13
SNHG3-201ENST00000413987 OR10AC1Q8NH08 325 aa8.02□□□□□ -1.13
SNHG3-201ENST00000413987 OR8U1Q8NH10 309 aa8.02□□□□□ -1.13
SNHG3-201ENST00000413987 TMEM170AQ8WVE7 144 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms