RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 SLC23A2Q9UGH3 650 aa2.55□□□□□ -2
HMGB3P31-201ENST00000413333 TP53TG1Q9Y2A0 90 aa2.55□□□□□ -2
HMGB3P31-201ENST00000413333 COL4A4P53420 1690 aaPredicted RBP2.54□□□□□ -2
HMGB3P31-201ENST00000413333 TRBV24-1A0A075B6N3 115 aa2.54□□□□□ -2
HMGB3P31-201ENST00000413333 C4orf51C9J302 202 aa2.54□□□□□ -2
HMGB3P31-201ENST00000413333 BIRC5O15392 142 aa2.54□□□□□ -2
HMGB3P31-201ENST00000413333 STX10O60499 249 aa2.54□□□□□ -2
HMGB3P31-201ENST00000413333 HBZP02008 142 aa2.54□□□□□ -2
HMGB3P31-201ENST00000413333 COX5BP10606 129 aa2.54□□□□□ -2
HMGB3P31-201ENST00000413333 HRES1P13985 223 aa2.54□□□□□ -2
HMGB3P31-201ENST00000413333 ZNF708P17019 499 aa2.54□□□□□ -2
HMGB3P31-201ENST00000413333 CDC34P49427 236 aaPredicted RBP2.54□□□□□ -2
HMGB3P31-201ENST00000413333 BLVRAP53004 296 aa2.54□□□□□ -2
HMGB3P31-201ENST00000413333 FOXA1P55317 472 aa2.54□□□□□ -2
HMGB3P31-201ENST00000413333 ACTBP60709 375 aa2.54□□□□□ -2
HMGB3P31-201ENST00000413333 ACTG1P63261 375 aa2.54□□□□□ -2
HMGB3P31-201ENST00000413333 KRTAP25-1Q3LHN0 102 aa2.54□□□□□ -2
HMGB3P31-201ENST00000413333 PYDC2Q56P42 97 aa2.54□□□□□ -2
HMGB3P31-201ENST00000413333 SCGB1D4Q6XE38 83 aa2.54□□□□□ -2
HMGB3P31-201ENST00000413333 LYZL2Q7Z4W2 148 aa2.54□□□□□ -2
HMGB3P31-201ENST00000413333 LRP11Q86VZ4 500 aa2.54□□□□□ -2
HMGB3P31-201ENST00000413333 LYPD1Q8N2G4 141 aa2.54□□□□□ -2
HMGB3P31-201ENST00000413333 RPRMLQ8N4K4 120 aa2.54□□□□□ -2
HMGB3P31-201ENST00000413333 EIF4E3Q8N5X7 224 aaKnown RBP2.54□□□□□ -2
HMGB3P31-201ENST00000413333 YIPF7Q8N8F6 280 aa2.54□□□□□ -2
HMGB3P31-201ENST00000413333 TNFAIP8L1Q8WVP5 186 aa2.54□□□□□ -2
HMGB3P31-201ENST00000413333 HIST1H2BAQ96A08 127 aa2.54□□□□□ -2
HMGB3P31-201ENST00000413333 IGF2BP2-AS1Q96M15 143 aa2.54□□□□□ -2
HMGB3P31-201ENST00000413333 MROQ9BYG7 248 aa2.54□□□□□ -2
HMGB3P31-201ENST00000413333 LINC00527Q9UJ94 153 aa2.54□□□□□ -2
HMGB3P31-201ENST00000413333 RPUSD1Q9UJJ7 312 aaKnown RBP2.54□□□□□ -2
HMGB3P31-201ENST00000413333 ZNF443Q9Y2A4 671 aaPredicted RBP2.54□□□□□ -2
HMGB3P31-201ENST00000413333 MTCH2Q9Y6C9 303 aa2.54□□□□□ -2
HMGB3P31-201ENST00000413333 CACNA1DQ01668 2161 aa2.54□□□□□ -2
HMGB3P31-201ENST00000413333 RIMS2Q9UQ26 1411 aa2.53□□□□□ -2
HMGB3P31-201ENST00000413333 IGKV2-24A0A0C4DH68 120 aa2.53□□□□□ -2
HMGB3P31-201ENST00000413333 IGKV1-12A0A0C4DH73 117 aa2.53□□□□□ -2
HMGB3P31-201ENST00000413333 GGTLC3B5MD39 225 aa2.53□□□□□ -2
HMGB3P31-201ENST00000413333 AZIN1O14977 448 aa2.53□□□□□ -2
HMGB3P31-201ENST00000413333 SH2D1AO60880 128 aa2.53□□□□□ -2
HMGB3P31-201ENST00000413333 NIPSNAP2O75323 286 aa2.53□□□□□ -2
HMGB3P31-201ENST00000413333 IGKV1D-12P01611 117 aa2.53□□□□□ -2
HMGB3P31-201ENST00000413333 FBP1P09467 338 aa2.53□□□□□ -2
HMGB3P31-201ENST00000413333 NEFHP12036 1026 aa2.53□□□□□ -2
HMGB3P31-201ENST00000413333 PSMB3P49720 205 aa2.53□□□□□ -2
HMGB3P31-201ENST00000413333 UBE2IP63279 158 aaKnown RBP2.53□□□□□ -2
HMGB3P31-201ENST00000413333 IGFBP7Q16270 282 aa2.53□□□□□ -2
HMGB3P31-201ENST00000413333 CDKL4Q5MAI5 379 aa2.53□□□□□ -2
HMGB3P31-201ENST00000413333 NIT1Q86X76 327 aa2.53□□□□□ -2
HMGB3P31-201ENST00000413333 TMEM75Q8N9X5 138 aa2.53□□□□□ -2
HMGB3P31-201ENST00000413333 SMIM19Q96E16 107 aa2.53□□□□□ -2
HMGB3P31-201ENST00000413333 SLC25A44Q96H78 314 aaPredicted RBP2.53□□□□□ -2
HMGB3P31-201ENST00000413333 KCTD7Q96MP8 289 aa2.53□□□□□ -2
HMGB3P31-201ENST00000413333 MED18Q9BUE0 208 aa2.53□□□□□ -2
HMGB3P31-201ENST00000413333 GTSF1LQ9H1H1 148 aa2.53□□□□□ -2
HMGB3P31-201ENST00000413333 MS4A6AQ9H2W1 248 aa2.53□□□□□ -2
HMGB3P31-201ENST00000413333 C11orf49Q9H6J7 331 aa2.53□□□□□ -2
HMGB3P31-201ENST00000413333 ZNF286AQ9HBT8 521 aa2.53□□□□□ -2
HMGB3P31-201ENST00000413333 SNX10Q9Y5X0 201 aa2.53□□□□□ -2
HMGB3P31-201ENST00000413333 SHANK1Q9Y566 2161 aa2.53□□□□□ -2
HMGB3P31-201ENST00000413333 IGKV1D-37A0A075B6S9 117 aa2.52□□□□□ -2.01
HMGB3P31-201ENST00000413333 D6RAR5 112 aa2.52□□□□□ -2.01
HMGB3P31-201ENST00000413333 DEXIO95424 95 aa2.52□□□□□ -2.01
HMGB3P31-201ENST00000413333 LINC00614P0C842 121 aa2.52□□□□□ -2.01
HMGB3P31-201ENST00000413333 OCM2P0CE71 109 aa2.52□□□□□ -2.01
HMGB3P31-201ENST00000413333 PSKH1P11801 424 aa2.52□□□□□ -2.01
HMGB3P31-201ENST00000413333 PPP1CCP36873 323 aaKnown RBP2.52□□□□□ -2.01
HMGB3P31-201ENST00000413333 IFNGR2P38484 337 aa2.52□□□□□ -2.01
HMGB3P31-201ENST00000413333 MAGEA2P43356 314 aa2.52□□□□□ -2.01
HMGB3P31-201ENST00000413333 H2BFSP57053 126 aa2.52□□□□□ -2.01
HMGB3P31-201ENST00000413333 BSPH1Q075Z2 132 aa2.52□□□□□ -2.01
HMGB3P31-201ENST00000413333 DHRS2Q13268 280 aa2.52□□□□□ -2.01
HMGB3P31-201ENST00000413333 IHHQ14623 411 aa2.52□□□□□ -2.01
HMGB3P31-201ENST00000413333 PDK2Q15119 407 aa2.52□□□□□ -2.01
HMGB3P31-201ENST00000413333 MESTQ5EB52 335 aa2.52□□□□□ -2.01
HMGB3P31-201ENST00000413333 C10orf91Q5T1B1 145 aa2.52□□□□□ -2.01
HMGB3P31-201ENST00000413333 CALHM3Q86XJ0 350 aa2.52□□□□□ -2.01
HMGB3P31-201ENST00000413333 TMEM156Q8N614 296 aa2.52□□□□□ -2.01
HMGB3P31-201ENST00000413333 NATD1Q8N6N6 113 aa2.52□□□□□ -2.01
HMGB3P31-201ENST00000413333 LINC00304Q8N9R0 145 aa2.52□□□□□ -2.01
HMGB3P31-201ENST00000413333 SLC37A2Q8TED4 501 aa2.52□□□□□ -2.01
HMGB3P31-201ENST00000413333 DHRS9Q9BPW9 319 aa2.52□□□□□ -2.01
HMGB3P31-201ENST00000413333 TIPINQ9BVW5 301 aa2.52□□□□□ -2.01
HMGB3P31-201ENST00000413333 LCE3DQ9BYE3 92 aa2.52□□□□□ -2.01
HMGB3P31-201ENST00000413333 SLC22A4Q9H015 551 aa2.52□□□□□ -2.01
HMGB3P31-201ENST00000413333 PARVAQ9NVD7 372 aa2.52□□□□□ -2.01
HMGB3P31-201ENST00000413333 USE1Q9NZ43 259 aa2.52□□□□□ -2.01
HMGB3P31-201ENST00000413333 DNAJC12Q9UKB3 198 aa2.52□□□□□ -2.01
HMGB3P31-201ENST00000413333 WASHC3Q9Y3C0 194 aa2.52□□□□□ -2.01
HMGB3P31-201ENST00000413333 LINC00588Q9Y4M8 146 aa2.52□□□□□ -2.01
HMGB3P31-201ENST00000413333 IGHV3OR15-7A0A075B7D8 119 aa2.51□□□□□ -2.01
HMGB3P31-201ENST00000413333 A0A1W2PNN7 141 aa2.51□□□□□ -2.01
HMGB3P31-201ENST00000413333 LECT2O14960 151 aa2.51□□□□□ -2.01
HMGB3P31-201ENST00000413333 SSNA1O43805 119 aa2.51□□□□□ -2.01
HMGB3P31-201ENST00000413333 OR13C7P0DN81 318 aa2.51□□□□□ -2.01
HMGB3P31-201ENST00000413333 OR12D1P0DN82 309 aa2.51□□□□□ -2.01
HMGB3P31-201ENST00000413333 CRABP1P29762 137 aa2.51□□□□□ -2.01
HMGB3P31-201ENST00000413333 SLC36A2Q495M3 483 aa2.51□□□□□ -2.01
HMGB3P31-201ENST00000413333 FAM19A5Q7Z5A7 132 aaPredicted RBP2.51□□□□□ -2.01
HMGB3P31-201ENST00000413333 HS3ST5Q8IZT8 346 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms