RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 RMND1Q9NWS8 449 aa0.88□□□□□ -2.27
PMS1-203ENST00000409593 PUS1Q9Y606 427 aaKnown RBP eCLIP0.88□□□□□ -2.27
PMS1-203ENST00000409593 DENND4BO75064 1496 aaPredicted RBP0.87□□□□□ -2.27
PMS1-203ENST00000409593 DHRS12A0PJE2 317 aa0.87□□□□□ -2.27
PMS1-203ENST00000409593 MGAT4DA6NG13 374 aa0.87□□□□□ -2.27
PMS1-203ENST00000409593 hCG_2039718K7EN88 272 aa0.87□□□□□ -2.27
PMS1-203ENST00000409593 VAPBO95292 243 aa0.87□□□□□ -2.27
PMS1-203ENST00000409593 PDK2Q15119 407 aa0.87□□□□□ -2.27
PMS1-203ENST00000409593 MRPL51Q4U2R6 128 aaKnown RBP0.87□□□□□ -2.27
PMS1-203ENST00000409593 FAM162BQ5T6X4 162 aa0.87□□□□□ -2.27
PMS1-203ENST00000409593 GLT6D1Q7Z4J2 308 aa0.87□□□□□ -2.27
PMS1-203ENST00000409593 ASCC1Q8N9N2 400 aaKnown RBP0.87□□□□□ -2.27
PMS1-203ENST00000409593 OR11L1Q8NGX0 322 aa0.87□□□□□ -2.27
PMS1-203ENST00000409593 LGALS14Q8TCE9 139 aa0.87□□□□□ -2.27
PMS1-203ENST00000409593 PGLYRP3Q96LB9 341 aa0.87□□□□□ -2.27
PMS1-203ENST00000409593 ZNF426Q9BUY5 554 aa0.87□□□□□ -2.27
PMS1-203ENST00000409593 C1QTNF6Q9BXI9 259 aa0.87□□□□□ -2.27
PMS1-203ENST00000409593 CDCA4Q9BXL8 241 aa0.87□□□□□ -2.27
PMS1-203ENST00000409593 C11orf49Q9H6J7 331 aa0.87□□□□□ -2.27
PMS1-203ENST00000409593 TMBIM4Q9HC24 238 aa0.87□□□□□ -2.27
PMS1-203ENST00000409593 TAS2R13Q9NYV9 303 aa0.87□□□□□ -2.27
PMS1-203ENST00000409593 PRO2289Q9P1D8 64 aa0.87□□□□□ -2.27
PMS1-203ENST00000409593 FIS1Q9Y3D6 152 aa0.87□□□□□ -2.27
PMS1-203ENST00000409593 IGHV3-15A0A0B4J1V0 119 aa0.86□□□□□ -2.27
PMS1-203ENST00000409593 C9J4A7 227 aa0.86□□□□□ -2.27
PMS1-203ENST00000409593 C8orf87E5RJ46 101 aa0.86□□□□□ -2.27
PMS1-203ENST00000409593 H3BPC8 53 aa0.86□□□□□ -2.27
PMS1-203ENST00000409593 SHOX2O60902 331 aaPredicted RBP0.86□□□□□ -2.27
PMS1-203ENST00000409593 CDK14O94921 469 aa0.86□□□□□ -2.27
PMS1-203ENST00000409593 SLC35A2P78381 396 aa0.86□□□□□ -2.27
PMS1-203ENST00000409593 RASL11AQ6T310 242 aa0.86□□□□□ -2.27
PMS1-203ENST00000409593 C2orf91Q6ZV80 131 aa0.86□□□□□ -2.27
PMS1-203ENST00000409593 ZNF283Q8N7M2 679 aa0.86□□□□□ -2.27
PMS1-203ENST00000409593 ALG5Q9Y673 324 aa0.86□□□□□ -2.27
PMS1-203ENST00000409593 CCDC88CQ9P219 2028 aa0.86□□□□□ -2.27
PMS1-203ENST00000409593 C11orf86A6NJI1 115 aa0.85□□□□□ -2.27
PMS1-203ENST00000409593 BOLA2-SMG1P6H3BVE0 249 aa0.85□□□□□ -2.27
PMS1-203ENST00000409593 EPPINO95925 133 aa0.85□□□□□ -2.27
PMS1-203ENST00000409593 CRYGCP07315 174 aa0.85□□□□□ -2.27
PMS1-203ENST00000409593 RAP1GDS1P52306 607 aa0.85□□□□□ -2.27
PMS1-203ENST00000409593 Q6ZTI0 123 aa0.85□□□□□ -2.27
PMS1-203ENST00000409593 RETNLBQ9BQ08 111 aa0.85□□□□□ -2.27
PMS1-203ENST00000409593 UPK3BQ9BT76 320 aa0.85□□□□□ -2.27
PMS1-203ENST00000409593 XKR8Q9H6D3 395 aa0.85□□□□□ -2.27
PMS1-203ENST00000409593 KIAA2026Q5HYC2 2103 aa0.85□□□□□ -2.27
PMS1-203ENST00000409593 GSTTP1A0A1W2PQM5 241 aa0.84□□□□□ -2.27
PMS1-203ENST00000409593 CDIPTO14735 213 aa0.84□□□□□ -2.27
PMS1-203ENST00000409593 SFTPCP11686 197 aa0.84□□□□□ -2.27
PMS1-203ENST00000409593 DYNLL1P63167 89 aaKnown RBP0.84□□□□□ -2.27
PMS1-203ENST00000409593 FAM201AQ5SY85 155 aa0.84□□□□□ -2.27
PMS1-203ENST00000409593 HENMT1Q5T8I9 393 aaKnown RBP0.84□□□□□ -2.27
PMS1-203ENST00000409593 OR5D18Q8NGL1 313 aa0.84□□□□□ -2.27
PMS1-203ENST00000409593 MND1Q9BWT6 205 aa0.84□□□□□ -2.27
PMS1-203ENST00000409593 ZNF471Q9BX82 626 aaPredicted RBP0.84□□□□□ -2.27
PMS1-203ENST00000409593 MRPS16Q9Y3D3 137 aaKnown RBP0.84□□□□□ -2.27
PMS1-203ENST00000409593 GOLGA8IPA6NC78 632 aa0.84□□□□□ -2.28
PMS1-203ENST00000409593 ESDP10768 282 aa0.84□□□□□ -2.28
PMS1-203ENST00000409593 G6PCP35575 357 aa0.84□□□□□ -2.28
PMS1-203ENST00000409593 VSNL1P62760 191 aa0.84□□□□□ -2.28
PMS1-203ENST00000409593 ERHP84090 104 aaKnown RBP0.84□□□□□ -2.28
PMS1-203ENST00000409593 HNRNPA1L2Q32P51 320 aaKnown RBP0.84□□□□□ -2.28
PMS1-203ENST00000409593 Q6ZT83 130 aa0.84□□□□□ -2.28
PMS1-203ENST00000409593 SSX6Q7RTT6 188 aa0.84□□□□□ -2.28
PMS1-203ENST00000409593 SPACA4Q8TDM5 124 aa0.84□□□□□ -2.28
PMS1-203ENST00000409593 FGF13Q92913 245 aa0.84□□□□□ -2.28
PMS1-203ENST00000409593 METTL17Q9H7H0 456 aaPredicted RBP0.84□□□□□ -2.28
PMS1-203ENST00000409593 IFT46Q9NQC8 304 aa0.84□□□□□ -2.28
PMS1-203ENST00000409593 NOTCH1P46531 2555 aa0.83□□□□□ -2.28
PMS1-203ENST00000409593 KIF27Q86VH2 1401 aa0.83□□□□□ -2.28
PMS1-203ENST00000409593 H3BSA7 217 aa0.83□□□□□ -2.28
PMS1-203ENST00000409593 UBFD1O14562 309 aaKnown RBP0.83□□□□□ -2.28
PMS1-203ENST00000409593 FABP7O15540 132 aa0.83□□□□□ -2.28
PMS1-203ENST00000409593 GNRH2O43555 120 aa0.83□□□□□ -2.28
PMS1-203ENST00000409593 CTSEP14091 401 aa0.83□□□□□ -2.28
PMS1-203ENST00000409593 PTNP21246 168 aa0.83□□□□□ -2.28
PMS1-203ENST00000409593 SULT1A2P50226 295 aa0.83□□□□□ -2.28
PMS1-203ENST00000409593 PRB3Q04118 309 aaPredicted RBP0.83□□□□□ -2.28
PMS1-203ENST00000409593 PAFAH1B3Q15102 231 aaKnown RBP0.83□□□□□ -2.28
PMS1-203ENST00000409593 LHFPL5Q8TAF8 219 aa0.83□□□□□ -2.28
PMS1-203ENST00000409593 BABAM2Q9NXR7 383 aa0.83□□□□□ -2.28
PMS1-203ENST00000409593 RABL2AQ9UBK7 228 aaPredicted RBP0.83□□□□□ -2.28
PMS1-203ENST00000409593 ATAD5Q96QE3 1844 aa0.83□□□□□ -2.28
PMS1-203ENST00000409593 DSCAML1Q8TD84 2053 aa0.83□□□□□ -2.28
PMS1-203ENST00000409593 A8MUN3 132 aa0.82□□□□□ -2.28
PMS1-203ENST00000409593 ZNF705DP0CH99 300 aaPredicted RBP0.82□□□□□ -2.28
PMS1-203ENST00000409593 ZNF705BP0CI00 300 aaPredicted RBP0.82□□□□□ -2.28
PMS1-203ENST00000409593 ACTR1BP42025 376 aa0.82□□□□□ -2.28
PMS1-203ENST00000409593 AQP5P55064 265 aa0.82□□□□□ -2.28
PMS1-203ENST00000409593 TSPEAR-AS2P59090 65 aa0.82□□□□□ -2.28
PMS1-203ENST00000409593 C1QTNF8P60827 252 aa0.82□□□□□ -2.28
PMS1-203ENST00000409593 TSPAN5P62079 268 aa0.82□□□□□ -2.28
PMS1-203ENST00000409593 CD164Q04900 197 aa0.82□□□□□ -2.28
PMS1-203ENST00000409593 NKAIN1Q4KMZ8 207 aa0.82□□□□□ -2.28
PMS1-203ENST00000409593 DOLPP1Q86YN1 238 aa0.82□□□□□ -2.28
PMS1-203ENST00000409593 YIPF7Q8N8F6 280 aa0.82□□□□□ -2.28
PMS1-203ENST00000409593 ANGPTL6Q8NI99 470 aa0.82□□□□□ -2.28
PMS1-203ENST00000409593 FAM45AQ8TCE6 357 aa0.82□□□□□ -2.28
PMS1-203ENST00000409593 OR5P2Q8WZ92 322 aa0.82□□□□□ -2.28
PMS1-203ENST00000409593 OR51E2Q9H255 320 aa0.82□□□□□ -2.28
PMS1-203ENST00000409593 DMAC2Q9NW81 257 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms