RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 MBNL3Q9NUK0 354 aaKnown RBP15.24■□□□□ 0.03
SMARCB1-204ENST00000407422 SCN3BQ9NY72 215 aa15.24■□□□□ 0.03
SMARCB1-204ENST00000407422 IGHG2P01859 326 aa15.23■□□□□ 0.03
SMARCB1-204ENST00000407422 SRMP19623 302 aa15.23■□□□□ 0.03
SMARCB1-204ENST00000407422 GNMTQ14749 295 aa15.23■□□□□ 0.03
SMARCB1-204ENST00000407422 C1orf100Q5SVJ3 147 aa15.23■□□□□ 0.03
SMARCB1-204ENST00000407422 LIPKQ5VXJ0 399 aa15.23■□□□□ 0.03
SMARCB1-204ENST00000407422 SLC35E3Q7Z769 313 aa15.23■□□□□ 0.03
SMARCB1-204ENST00000407422 OR2T10Q8NGZ9 312 aa15.23■□□□□ 0.03
SMARCB1-204ENST00000407422 CHPT1Q8WUD6 406 aa15.23■□□□□ 0.03
SMARCB1-204ENST00000407422 PHYHIPQ92561 330 aa15.23■□□□□ 0.03
SMARCB1-204ENST00000407422 TMEM203Q969S6 136 aa15.23■□□□□ 0.03
SMARCB1-204ENST00000407422 RAB9BQ9NP90 201 aa15.23■□□□□ 0.03
SMARCB1-204ENST00000407422 OR2S2Q9NQN1 319 aa15.23■□□□□ 0.03
SMARCB1-204ENST00000407422 CD1BP29016 333 aa15.22■□□□□ 0.03
SMARCB1-204ENST00000407422 ZNF137PP52743 207 aa15.22■□□□□ 0.03
SMARCB1-204ENST00000407422 TMEM30BQ3MIR4 351 aa15.22■□□□□ 0.03
SMARCB1-204ENST00000407422 HSD17B12Q53GQ0 312 aa15.22■□□□□ 0.03
SMARCB1-204ENST00000407422 FOXB2Q5VYV0 432 aa15.22■□□□□ 0.03
SMARCB1-204ENST00000407422 GLT8D1Q68CQ7 371 aa15.22■□□□□ 0.03
SMARCB1-204ENST00000407422 TRAT1Q6PIZ9 186 aa15.22■□□□□ 0.03
SMARCB1-204ENST00000407422 TGIF2LXQ8IUE1 241 aa15.22■□□□□ 0.03
SMARCB1-204ENST00000407422 Q8N9W7 124 aa15.22■□□□□ 0.03
SMARCB1-204ENST00000407422 OR52L2PQ8NGH6 319 aa15.22■□□□□ 0.03
SMARCB1-204ENST00000407422 SULT4A1Q9BR01 284 aa15.22■□□□□ 0.03
SMARCB1-204ENST00000407422 PLSCR3Q9NRY6 295 aa15.22■□□□□ 0.03
SMARCB1-204ENST00000407422 NECAP2Q9NVZ3 263 aa15.22■□□□□ 0.03
SMARCB1-204ENST00000407422 UBBP0CG47 229 aa15.21■□□□□ 0.03
SMARCB1-204ENST00000407422 CHATP28329 748 aa15.21■□□□□ 0.03
SMARCB1-204ENST00000407422 HTR2CP28335 458 aa15.21■□□□□ 0.03
SMARCB1-204ENST00000407422 UNC119Q13432 240 aa15.21■□□□□ 0.03
SMARCB1-204ENST00000407422 MORN2Q502X0 79 aa15.21■□□□□ 0.03
SMARCB1-204ENST00000407422 C18orf65Q6ZTR6 163 aa15.21■□□□□ 0.03
SMARCB1-204ENST00000407422 REC114Q7Z4M0 266 aa15.21■□□□□ 0.03
SMARCB1-204ENST00000407422 NICN1Q9BSH3 213 aa15.21■□□□□ 0.03
SMARCB1-204ENST00000407422 FAAP24Q9BTP7 215 aa15.21■□□□□ 0.03
SMARCB1-204ENST00000407422 DUSP21Q9H596 190 aa15.21■□□□□ 0.03
SMARCB1-204ENST00000407422 AURKAIP1Q9NWT8 199 aaPredicted RBP15.21■□□□□ 0.03
SMARCB1-204ENST00000407422 MOSP00540 346 aa15.21■□□□□ 0.02
SMARCB1-204ENST00000407422 UCHL1P09936 223 aa15.21■□□□□ 0.02
SMARCB1-204ENST00000407422 PPP1CCP36873 323 aaKnown RBP15.21■□□□□ 0.02
SMARCB1-204ENST00000407422 RPS27AP62979 156 aaKnown RBP15.21■□□□□ 0.02
SMARCB1-204ENST00000407422 C6orf201Q7Z4U5 140 aa15.21■□□□□ 0.02
SMARCB1-204ENST00000407422 STPG2Q8N412 459 aa15.21■□□□□ 0.02
SMARCB1-204ENST00000407422 UFD1Q92890 307 aa15.21■□□□□ 0.02
SMARCB1-204ENST00000407422 NEDD4LQ96PU5 975 aa15.21■□□□□ 0.02
SMARCB1-204ENST00000407422 TMEM59Q9BXS4 323 aa15.21■□□□□ 0.02
SMARCB1-204ENST00000407422 ABCG5Q9H222 651 aa15.21■□□□□ 0.02
SMARCB1-204ENST00000407422 KCNIP1Q9NZI2 227 aa15.21■□□□□ 0.02
SMARCB1-204ENST00000407422 TPRKBQ9Y3C4 175 aa15.21■□□□□ 0.02
SMARCB1-204ENST00000407422 SLC22A1O15245 554 aa15.2■□□□□ 0.02
SMARCB1-204ENST00000407422 HSMCR30P0CW71 290 aa15.2■□□□□ 0.02
SMARCB1-204ENST00000407422 CD37P11049 281 aa15.2■□□□□ 0.02
SMARCB1-204ENST00000407422 MYF6P23409 242 aa15.2■□□□□ 0.02
SMARCB1-204ENST00000407422 GPR12P47775 334 aa15.2■□□□□ 0.02
SMARCB1-204ENST00000407422 F2RL1P55085 397 aa15.2■□□□□ 0.02
SMARCB1-204ENST00000407422 RPL23AP62750 156 aaKnown RBP15.2■□□□□ 0.02
SMARCB1-204ENST00000407422 QRFPP83859 136 aa15.2■□□□□ 0.02
SMARCB1-204ENST00000407422 STEAP3Q658P3 488 aa15.2■□□□□ 0.02
SMARCB1-204ENST00000407422 ETV3LQ6ZN32 361 aa15.2■□□□□ 0.02
SMARCB1-204ENST00000407422 TMEM91Q6ZNR0 172 aa15.2■□□□□ 0.02
SMARCB1-204ENST00000407422 FOXRED2Q8IWF2 684 aa15.2■□□□□ 0.02
SMARCB1-204ENST00000407422 LIN7CQ9NUP9 197 aaKnown RBP15.2■□□□□ 0.02
SMARCB1-204ENST00000407422 TXNL1O43396 289 aa15.19■□□□□ 0.02
SMARCB1-204ENST00000407422 RPS25P62851 125 aaKnown RBP15.19■□□□□ 0.02
SMARCB1-204ENST00000407422 OR2W3Q7Z3T1 314 aa15.19■□□□□ 0.02
SMARCB1-204ENST00000407422 KCNG3Q8TAE7 436 aa15.19■□□□□ 0.02
SMARCB1-204ENST00000407422 MRAPQ8TCY5 172 aa15.19■□□□□ 0.02
SMARCB1-204ENST00000407422 S1PR3Q99500 378 aa15.19■□□□□ 0.02
SMARCB1-204ENST00000407422 GFI1Q99684 422 aa15.19■□□□□ 0.02
SMARCB1-204ENST00000407422 TM2D1Q9BX74 207 aa15.19■□□□□ 0.02
SMARCB1-204ENST00000407422 A0A0A6YYD4 124 aa15.18■□□□□ 0.02
SMARCB1-204ENST00000407422 RGS10O43665 173 aa15.18■□□□□ 0.02
SMARCB1-204ENST00000407422 LANCL1O43813 399 aa15.18■□□□□ 0.02
SMARCB1-204ENST00000407422 TPBGQ13641 420 aa15.18■□□□□ 0.02
SMARCB1-204ENST00000407422 ZNF554Q86TJ5 538 aa15.18■□□□□ 0.02
SMARCB1-204ENST00000407422 ODF3L1Q8IXM7 274 aa15.18■□□□□ 0.02
SMARCB1-204ENST00000407422 LINC00482Q8N8I6 264 aa15.18■□□□□ 0.02
SMARCB1-204ENST00000407422 ABHD14AQ9BUJ0 271 aa15.18■□□□□ 0.02
SMARCB1-204ENST00000407422 ANKRD60Q9BZ19 345 aa15.18■□□□□ 0.02
SMARCB1-204ENST00000407422 JPT1Q9UK76 154 aa15.18■□□□□ 0.02
SMARCB1-204ENST00000407422 TMEM14DPA8MWL7 114 aa15.17■□□□□ 0.02
SMARCB1-204ENST00000407422 AP4M1O00189 453 aa15.17■□□□□ 0.02
SMARCB1-204ENST00000407422 SLC35B1P78383 322 aa15.17■□□□□ 0.02
SMARCB1-204ENST00000407422 HTD2P86397 168 aa15.17■□□□□ 0.02
SMARCB1-204ENST00000407422 LSAMPQ13449 338 aa15.17■□□□□ 0.02
SMARCB1-204ENST00000407422 C8orf86Q6ZUL3 223 aa15.17■□□□□ 0.02
SMARCB1-204ENST00000407422 MRPL41Q8IXM3 137 aaKnown RBP15.17■□□□□ 0.02
SMARCB1-204ENST00000407422 FAM71E2Q8N5Q1 922 aa15.17■□□□□ 0.02
SMARCB1-204ENST00000407422 RASL11BQ9BPW5 248 aa15.17■□□□□ 0.02
SMARCB1-204ENST00000407422 HSPB9Q9BQS6 159 aa15.17■□□□□ 0.02
SMARCB1-204ENST00000407422 CCDC90BQ9GZT6 254 aa15.17■□□□□ 0.02
SMARCB1-204ENST00000407422 BPNT1O95861 308 aa15.17■□□□□ 0.02
SMARCB1-204ENST00000407422 CRHBPP24387 322 aa15.17■□□□□ 0.02
SMARCB1-204ENST00000407422 BLVRBP30043 206 aaPredicted RBP15.17■□□□□ 0.02
SMARCB1-204ENST00000407422 MAP2K4P45985 399 aa15.17■□□□□ 0.02
SMARCB1-204ENST00000407422 P2RY14Q15391 338 aa15.17■□□□□ 0.02
SMARCB1-204ENST00000407422 HMGN3Q15651 99 aa15.17■□□□□ 0.02
SMARCB1-204ENST00000407422 LCNL1Q6ZST4 164 aa15.17■□□□□ 0.02
SMARCB1-204ENST00000407422 OR6M1Q8NGM8 313 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms