RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 ISYNA1Q9NPH2 558 aa9.4□□□□□ -0.9
SMIM11A-201ENST00000399292 KIAA2026Q5HYC2 2103 aa9.4□□□□□ -0.91
SMIM11A-201ENST00000399292 A0A1W2PPE3 182 aa9.39□□□□□ -0.91
SMIM11A-201ENST00000399292 FAM90A9PA6NNJ1 464 aa9.39□□□□□ -0.91
SMIM11A-201ENST00000399292 SPINT2O43291 252 aa9.39□□□□□ -0.91
SMIM11A-201ENST00000399292 SC5DO75845 299 aa9.39□□□□□ -0.91
SMIM11A-201ENST00000399292 MPIG6BO95866 241 aa9.39□□□□□ -0.91
SMIM11A-201ENST00000399292 UCHL1P09936 223 aa9.39□□□□□ -0.91
SMIM11A-201ENST00000399292 PI3P19957 117 aa9.39□□□□□ -0.91
SMIM11A-201ENST00000399292 RAB7AP51149 207 aa9.39□□□□□ -0.91
SMIM11A-201ENST00000399292 TAGLNQ01995 201 aaKnown RBP9.39□□□□□ -0.91
SMIM11A-201ENST00000399292 EMX1Q04741 257 aaPredicted RBP9.39□□□□□ -0.91
SMIM11A-201ENST00000399292 TRAM1Q15629 374 aa9.39□□□□□ -0.91
SMIM11A-201ENST00000399292 ABCA11PQ4W5N1 156 aa9.39□□□□□ -0.91
SMIM11A-201ENST00000399292 C6orf183Q5T699 404 aa9.39□□□□□ -0.91
SMIM11A-201ENST00000399292 PRSS48Q7RTY5 328 aa9.39□□□□□ -0.91
SMIM11A-201ENST00000399292 CENPVQ7Z7K6 275 aaPredicted RBP9.39□□□□□ -0.91
SMIM11A-201ENST00000399292 OR8H3Q8N146 312 aa9.39□□□□□ -0.91
SMIM11A-201ENST00000399292 OR4K15Q8NH41 348 aa9.39□□□□□ -0.91
SMIM11A-201ENST00000399292 UBALD1Q8TB05 177 aa9.39□□□□□ -0.91
SMIM11A-201ENST00000399292 CNBD2Q96M20 576 aa9.39□□□□□ -0.91
SMIM11A-201ENST00000399292 GFOD1Q9NXC2 390 aa9.39□□□□□ -0.91
SMIM11A-201ENST00000399292 IGHV3-43A0A0B4J1X8 118 aa9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 UBE2QL1A1L167 161 aa9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 C12orf77C9JDV5 145 aa9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 M0QZK8 103 aa9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 CCRL2O00421 344 aa9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 PDCD6O75340 191 aa9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 GAPDHP04406 335 aaKnown RBP9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 IGHV3-43DP0DP04 118 aa9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 CD28P10747 220 aa9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 RCC1P18754 421 aaPredicted RBP9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 PSMA1P25786 263 aaKnown RBP9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 HTR2CP28335 458 aa9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 LOXL3P58215 753 aa9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 DEFA6Q01524 100 aa9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 MLLT11Q13015 90 aaPredicted RBP9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 DIAPH2-AS1Q14236 149 aa9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 HES1Q14469 280 aa9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 NSUN5P1Q3KNT7 163 aa9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 HIST2H2BDQ6DRA6 164 aa9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 SIGIRRQ6IA17 410 aa9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 OR10K2Q6IF99 312 aa9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 TRAT1Q6PIZ9 186 aa9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 TMEM91Q6ZNR0 172 aa9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 GAPTQ8N292 157 aa9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 PRR18Q8N4B5 295 aa9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 LINC00311Q8N616 119 aa9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 DRAM1Q8N682 238 aa9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 C8orf31Q8N9H6 132 aa9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 OR56B4Q8NH76 319 aa9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 KCNG3Q8TAE7 436 aa9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 NEDD4LQ96PU5 975 aa9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 MGLLQ99685 303 aa9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 KCNIP1Q9NZI2 227 aa9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 BLOC1S6Q9UL45 172 aa9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 RAB26Q9ULW5 256 aa9.38□□□□□ -0.91
SMIM11A-201ENST00000399292 A0A1W2PPI3 338 aa9.37□□□□□ -0.91
SMIM11A-201ENST00000399292 SLC22A1O15245 554 aa9.37□□□□□ -0.91
SMIM11A-201ENST00000399292 ARL6IP5O75915 188 aa9.37□□□□□ -0.91
SMIM11A-201ENST00000399292 HBZP02008 142 aa9.37□□□□□ -0.91
SMIM11A-201ENST00000399292 AMY1AP04745 511 aa9.37□□□□□ -0.91
SMIM11A-201ENST00000399292 AMY2AP04746 511 aa9.37□□□□□ -0.91
SMIM11A-201ENST00000399292 LPLP06858 475 aa9.37□□□□□ -0.91
SMIM11A-201ENST00000399292 SNRNP70P08621 437 aaKnown RBP9.37□□□□□ -0.91
SMIM11A-201ENST00000399292 CD37P11049 281 aa9.37□□□□□ -0.91
SMIM11A-201ENST00000399292 CPEP16870 476 aa9.37□□□□□ -0.91
SMIM11A-201ENST00000399292 IL3RAP26951 378 aa9.37□□□□□ -0.91
SMIM11A-201ENST00000399292 MAP2K4P45985 399 aa9.37□□□□□ -0.91
SMIM11A-201ENST00000399292 RPS27AP62979 156 aaKnown RBP9.37□□□□□ -0.91
SMIM11A-201ENST00000399292 ZNF816Q0VGE8 651 aaPredicted RBP9.37□□□□□ -0.91
SMIM11A-201ENST00000399292 HNF4GQ14541 408 aa9.37□□□□□ -0.91
SMIM11A-201ENST00000399292 TMEM95Q3KNT9 176 aa9.37□□□□□ -0.91
SMIM11A-201ENST00000399292 TMEM30BQ3MIR4 351 aa9.37□□□□□ -0.91
SMIM11A-201ENST00000399292 Q3ZCU0 254 aa9.37□□□□□ -0.91
SMIM11A-201ENST00000399292 C9orf152Q5JTZ5 239 aa9.37□□□□□ -0.91
SMIM11A-201ENST00000399292 MOB3BQ86TA1 216 aa9.37□□□□□ -0.91
SMIM11A-201ENST00000399292 NDUFA11Q86Y39 141 aa9.37□□□□□ -0.91
SMIM11A-201ENST00000399292 LYG1Q8N1E2 194 aa9.37□□□□□ -0.91
SMIM11A-201ENST00000399292 OR5AU1Q8NGC0 362 aa9.37□□□□□ -0.91
SMIM11A-201ENST00000399292 WIPF2Q8TF74 440 aaPredicted RBP9.37□□□□□ -0.91
SMIM11A-201ENST00000399292 TAF9BQ9HBM6 251 aa9.37□□□□□ -0.91
SMIM11A-201ENST00000399292 GNG12Q9UBI6 72 aa9.37□□□□□ -0.91
SMIM11A-201ENST00000399292 NOTCH1P46531 2555 aa9.37□□□□□ -0.91
SMIM11A-201ENST00000399292 IGHV1-3A0A0C4DH29 117 aa9.36□□□□□ -0.91
SMIM11A-201ENST00000399292 HSD17B6O14756 317 aa9.36□□□□□ -0.91
SMIM11A-201ENST00000399292 KCNAB3O43448 404 aa9.36□□□□□ -0.91
SMIM11A-201ENST00000399292 ATP6V1G2O95670 118 aa9.36□□□□□ -0.91
SMIM11A-201ENST00000399292 IGKV1D-33P01593 117 aa9.36□□□□□ -0.91
SMIM11A-201ENST00000399292 IGKV1-33P01594 117 aa9.36□□□□□ -0.91
SMIM11A-201ENST00000399292 OPN1MWP04001 364 aa9.36□□□□□ -0.91
SMIM11A-201ENST00000399292 OPN1MW2P0DN77 364 aa9.36□□□□□ -0.91
SMIM11A-201ENST00000399292 OPN1MW3P0DN78 364 aa9.36□□□□□ -0.91
SMIM11A-201ENST00000399292 ARSBP15848 533 aa9.36□□□□□ -0.91
SMIM11A-201ENST00000399292 TMEM11P17152 192 aa9.36□□□□□ -0.91
SMIM11A-201ENST00000399292 REG1BP48304 166 aa9.36□□□□□ -0.91
SMIM11A-201ENST00000399292 RPS25P62851 125 aaKnown RBP9.36□□□□□ -0.91
SMIM11A-201ENST00000399292 STEAP3Q658P3 488 aa9.36□□□□□ -0.91
SMIM11A-201ENST00000399292 FAM53AQ6NSI3 398 aaPredicted RBP9.36□□□□□ -0.91
SMIM11A-201ENST00000399292 ZNF554Q86TJ5 538 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms