RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 Q6ZR03 302 aa14.92□□□□□ -0.02
HLA-DQB1-204ENST00000399084 Q6ZRG5 221 aa14.92□□□□□ -0.02
HLA-DQB1-204ENST00000399084 ZNF645Q8N7E2 425 aa14.92□□□□□ -0.02
HLA-DQB1-204ENST00000399084 RBMXL3Q8N7X1 1067 aaKnown RBP14.92□□□□□ -0.02
HLA-DQB1-204ENST00000399084 FAM57AQ8TBR7 257 aa14.92□□□□□ -0.02
HLA-DQB1-204ENST00000399084 HIPK2Q9H2X6 1198 aa14.92□□□□□ -0.02
HLA-DQB1-204ENST00000399084 NCOR1P1Q9H4R4 102 aa14.92□□□□□ -0.02
HLA-DQB1-204ENST00000399084 OR14J1Q9UGF5 321 aa14.92□□□□□ -0.02
HLA-DQB1-204ENST00000399084 CACFD1Q9UGQ2 172 aa14.92□□□□□ -0.02
HLA-DQB1-204ENST00000399084 F8W036 122 aa14.91□□□□□ -0.02
HLA-DQB1-204ENST00000399084 KLK10O43240 276 aa14.91□□□□□ -0.02
HLA-DQB1-204ENST00000399084 PSPNO60542 156 aa14.91□□□□□ -0.02
HLA-DQB1-204ENST00000399084 TSPAN15O95858 294 aa14.91□□□□□ -0.02
HLA-DQB1-204ENST00000399084 NINJ1Q92982 152 aa14.91□□□□□ -0.02
HLA-DQB1-204ENST00000399084 GPR146Q96CH1 333 aa14.91□□□□□ -0.02
HLA-DQB1-204ENST00000399084 LAMP3Q9UQV4 416 aa14.91□□□□□ -0.02
HLA-DQB1-204ENST00000399084 FAM215AQ9Y5M1 114 aa14.91□□□□□ -0.02
HLA-DQB1-204ENST00000399084 FAM24AA6NFZ4 105 aa14.9□□□□□ -0.02
HLA-DQB1-204ENST00000399084 CHST1O43916 411 aa14.9□□□□□ -0.02
HLA-DQB1-204ENST00000399084 SSSCA1O60232 199 aa14.9□□□□□ -0.02
HLA-DQB1-204ENST00000399084 ADH4P08319 380 aa14.9□□□□□ -0.02
HLA-DQB1-204ENST00000399084 PSG2P11465 335 aa14.9□□□□□ -0.02
HLA-DQB1-204ENST00000399084 HTD2P86397 168 aa14.9□□□□□ -0.02
HLA-DQB1-204ENST00000399084 CATR1Q13166 79 aa14.9□□□□□ -0.02
HLA-DQB1-204ENST00000399084 C5orf24Q7Z6I8 188 aa14.9□□□□□ -0.02
HLA-DQB1-204ENST00000399084 STX12Q86Y82 276 aa14.9□□□□□ -0.02
HLA-DQB1-204ENST00000399084 OR51H1Q8NH63 302 aa14.9□□□□□ -0.02
HLA-DQB1-204ENST00000399084 RNASE11Q8TAA1 199 aaKnown RBP14.9□□□□□ -0.02
HLA-DQB1-204ENST00000399084 RAB9BQ9NP90 201 aa14.9□□□□□ -0.02
HLA-DQB1-204ENST00000399084 A0A1B0GW64 132 aa14.89□□□□□ -0.03
HLA-DQB1-204ENST00000399084 BTBD17A6NE02 478 aa14.89□□□□□ -0.03
HLA-DQB1-204ENST00000399084 PROB1E7EW31 1015 aa14.89□□□□□ -0.03
HLA-DQB1-204ENST00000399084 TNFSF12O43508 249 aa14.89□□□□□ -0.03
HLA-DQB1-204ENST00000399084 OR8U9P0C7N5 309 aa14.89□□□□□ -0.03
HLA-DQB1-204ENST00000399084 GZMHP20718 246 aa14.89□□□□□ -0.03
HLA-DQB1-204ENST00000399084 SELENOVP59797 346 aa14.89□□□□□ -0.03
HLA-DQB1-204ENST00000399084 PEA15Q15121 130 aa14.89□□□□□ -0.03
HLA-DQB1-204ENST00000399084 FAM180AQ6UWF9 173 aa14.89□□□□□ -0.03
HLA-DQB1-204ENST00000399084 DPPA3Q6W0C5 159 aa14.89□□□□□ -0.03
HLA-DQB1-204ENST00000399084 DRAM1Q8N682 238 aa14.89□□□□□ -0.03
HLA-DQB1-204ENST00000399084 KDF1Q8NAX2 398 aaPredicted RBP14.89□□□□□ -0.03
HLA-DQB1-204ENST00000399084 OR8U1Q8NH10 309 aa14.89□□□□□ -0.03
HLA-DQB1-204ENST00000399084 SSUH2Q9Y2M2 353 aa14.89□□□□□ -0.03
HLA-DQB1-204ENST00000399084 EP300Q09472 2414 aaPredicted RBP14.89□□□□□ -0.03
HLA-DQB1-204ENST00000399084 FREM2Q5SZK8 3169 aa14.89□□□□□ -0.03
HLA-DQB1-204ENST00000399084 IGSF23A1L1A6 192 aa14.89□□□□□ -0.03
HLA-DQB1-204ENST00000399084 SRRM5B3KS81 715 aa14.89□□□□□ -0.03
HLA-DQB1-204ENST00000399084 C12orf77C9JDV5 145 aa14.89□□□□□ -0.03
HLA-DQB1-204ENST00000399084 CAMLGP49069 296 aa14.89□□□□□ -0.03
HLA-DQB1-204ENST00000399084 MIDNQ504T8 468 aa14.89□□□□□ -0.03
HLA-DQB1-204ENST00000399084 ZNF474Q6S9Z5 364 aaPredicted RBP14.89□□□□□ -0.03
HLA-DQB1-204ENST00000399084 PBDC1Q9BVG4 233 aa14.89□□□□□ -0.03
HLA-DQB1-204ENST00000399084 PLA2G2EQ9NZK7 142 aa14.89□□□□□ -0.03
HLA-DQB1-204ENST00000399084 IGLV3-9A0A075B6K5 115 aa14.88□□□□□ -0.03
HLA-DQB1-204ENST00000399084 KIAA1324LA8MWY0 1029 aaPredicted RBP14.88□□□□□ -0.03
HLA-DQB1-204ENST00000399084 SPINT2O43291 252 aa14.88□□□□□ -0.03
HLA-DQB1-204ENST00000399084 OR3A1P47881 315 aa14.88□□□□□ -0.03
HLA-DQB1-204ENST00000399084 SULT1A1P50225 295 aa14.88□□□□□ -0.03
HLA-DQB1-204ENST00000399084 KLF3P57682 345 aaPredicted RBP14.88□□□□□ -0.03
HLA-DQB1-204ENST00000399084 NKX6-1P78426 367 aaPredicted RBP14.88□□□□□ -0.03
HLA-DQB1-204ENST00000399084 CR1LQ2VPA4 569 aa14.88□□□□□ -0.03
HLA-DQB1-204ENST00000399084 ZNF66Q6ZN08 573 aa14.88□□□□□ -0.03
HLA-DQB1-204ENST00000399084 ZNF826PQ6ZT77 177 aa14.88□□□□□ -0.03
HLA-DQB1-204ENST00000399084 PRR18Q8N4B5 295 aa14.88□□□□□ -0.03
HLA-DQB1-204ENST00000399084 BOLLQ8N9W6 283 aaKnown RBP14.88□□□□□ -0.03
HLA-DQB1-204ENST00000399084 BSCL2Q96G97 398 aaPredicted RBP14.88□□□□□ -0.03
HLA-DQB1-204ENST00000399084 MSL2Q9HCI7 577 aa14.88□□□□□ -0.03
HLA-DQB1-204ENST00000399084 C19orf12Q9NSK7 152 aa14.88□□□□□ -0.03
HLA-DQB1-204ENST00000399084 KCNS2Q9ULS6 477 aa14.88□□□□□ -0.03
HLA-DQB1-204ENST00000399084 PPP1R3CQ9UQK1 317 aa14.88□□□□□ -0.03
HLA-DQB1-204ENST00000399084 MMP24Q9Y5R2 645 aa14.88□□□□□ -0.03
HLA-DQB1-204ENST00000399084 TOR1AO14656 332 aa14.87□□□□□ -0.03
HLA-DQB1-204ENST00000399084 SYNGR2O43760 224 aa14.87□□□□□ -0.03
HLA-DQB1-204ENST00000399084 LY86O95711 162 aa14.87□□□□□ -0.03
HLA-DQB1-204ENST00000399084 HBZP02008 142 aa14.87□□□□□ -0.03
HLA-DQB1-204ENST00000399084 PRH1P02810 166 aa14.87□□□□□ -0.03
HLA-DQB1-204ENST00000399084 MUC1P15941 1255 aaPredicted RBP14.87□□□□□ -0.03
HLA-DQB1-204ENST00000399084 PRDX2P32119 198 aa14.87□□□□□ -0.03
HLA-DQB1-204ENST00000399084 SNCAP37840 140 aa14.87□□□□□ -0.03
HLA-DQB1-204ENST00000399084 AKR1C2P52895 323 aa14.87□□□□□ -0.03
HLA-DQB1-204ENST00000399084 ZNF585BQ52M93 769 aa14.87□□□□□ -0.03
HLA-DQB1-204ENST00000399084 KRBOX4Q5JUW0 171 aa14.87□□□□□ -0.03
HLA-DQB1-204ENST00000399084 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.87□□□□□ -0.03
HLA-DQB1-204ENST00000399084 LRRC29Q8WV35 223 aa14.87□□□□□ -0.03
HLA-DQB1-204ENST00000399084 EDARADDQ8WWZ3 215 aa14.87□□□□□ -0.03
HLA-DQB1-204ENST00000399084 S100PBPQ96BU1 408 aa14.87□□□□□ -0.03
HLA-DQB1-204ENST00000399084 SNX22Q96L94 193 aa14.87□□□□□ -0.03
HLA-DQB1-204ENST00000399084 MS4A7Q9GZW8 240 aaPredicted RBP14.87□□□□□ -0.03
HLA-DQB1-204ENST00000399084 KPTNQ9Y664 436 aa14.87□□□□□ -0.03
HLA-DQB1-204ENST00000399084 LOC105371267A0A1B0GV96 52 aa14.86□□□□□ -0.03
HLA-DQB1-204ENST00000399084 DNASE2O00115 360 aaPredicted RBP14.86□□□□□ -0.03
HLA-DQB1-204ENST00000399084 TSPAN4O14817 238 aa14.86□□□□□ -0.03
HLA-DQB1-204ENST00000399084 TXNL1O43396 289 aa14.86□□□□□ -0.03
HLA-DQB1-204ENST00000399084 GATA4P43694 442 aa14.86□□□□□ -0.03
HLA-DQB1-204ENST00000399084 GABRA2P47869 451 aa14.86□□□□□ -0.03
HLA-DQB1-204ENST00000399084 PAX9P55771 341 aa14.86□□□□□ -0.03
HLA-DQB1-204ENST00000399084 COL10A1Q03692 680 aa14.86□□□□□ -0.03
HLA-DQB1-204ENST00000399084 PRAMEF6Q5VXH4 476 aa14.86□□□□□ -0.03
HLA-DQB1-204ENST00000399084 OR2Z1Q8NG97 314 aa14.86□□□□□ -0.03
HLA-DQB1-204ENST00000399084 OR5C1Q8NGR4 320 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms