RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 ZDHHC11Q9H8X9 412 aa12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 PARP11Q9NR21 331 aa12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 SLC2A8Q9NY64 477 aa12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 CACNA1DQ01668 2161 aa12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 PLXNA3P51805 1871 aa12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 NPIPB7O75200 414 aa12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 ACSM6Q6P461 480 aa12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 OR8B3Q8NGG8 313 aa12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 OR8B2Q96RD0 313 aa12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 DIRC2Q96SL1 478 aa12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 THYN1Q9P016 225 aa12.28□□□□□ -0.44
PCDHGA11-201ENST00000398587 ZNF318Q5VUA4 2279 aa12.27□□□□□ -0.44
PCDHGA11-201ENST00000398587 UMODP07911 640 aa12.27□□□□□ -0.44
PCDHGA11-201ENST00000398587 G6PCP35575 357 aa12.27□□□□□ -0.44
PCDHGA11-201ENST00000398587 TMEM222Q9H0R3 208 aa12.27□□□□□ -0.44
PCDHGA11-201ENST00000398587 DLL3Q9NYJ7 618 aa12.27□□□□□ -0.44
PCDHGA11-201ENST00000398587 PPIAL4EA0A075B759 164 aa12.27□□□□□ -0.45
PCDHGA11-201ENST00000398587 IGHV3OR15-7A0A075B7D8 119 aa12.27□□□□□ -0.45
PCDHGA11-201ENST00000398587 PPIAL4DF5H284 164 aa12.27□□□□□ -0.45
PCDHGA11-201ENST00000398587 H0Y980 276 aa12.27□□□□□ -0.45
PCDHGA11-201ENST00000398587 MFNGO00587 321 aa12.27□□□□□ -0.45
PCDHGA11-201ENST00000398587 CDX4O14627 284 aaPredicted RBP12.27□□□□□ -0.45
PCDHGA11-201ENST00000398587 ZNHIT1O43257 154 aa12.27□□□□□ -0.45
PCDHGA11-201ENST00000398587 GAPDHP04406 335 aaKnown RBP12.27□□□□□ -0.45
PCDHGA11-201ENST00000398587 PPIAL4FP0DN26 164 aa12.27□□□□□ -0.45
PCDHGA11-201ENST00000398587 FGF8P55075 233 aaPredicted RBP12.27□□□□□ -0.45
PCDHGA11-201ENST00000398587 RPL31P62899 125 aaKnown RBP12.27□□□□□ -0.45
PCDHGA11-201ENST00000398587 PNRC1Q12796 327 aaPredicted RBP12.27□□□□□ -0.45
PCDHGA11-201ENST00000398587 SIGLEC12Q96PQ1 595 aa12.27□□□□□ -0.45
PCDHGA11-201ENST00000398587 OR1A1Q9P1Q5 309 aa12.27□□□□□ -0.45
PCDHGA11-201ENST00000398587 PPIAL4AQ9Y536 164 aa12.27□□□□□ -0.45
PCDHGA11-201ENST00000398587 LIPGQ9Y5X9 500 aa12.27□□□□□ -0.45
PCDHGA11-201ENST00000398587 SSTP61278 116 aa12.27□□□□□ -0.45
PCDHGA11-201ENST00000398587 MED12Q93074 2177 aa12.27□□□□□ -0.45
PCDHGA11-201ENST00000398587 CTRB1P17538 263 aa12.26□□□□□ -0.45
PCDHGA11-201ENST00000398587 CTSSP25774 331 aa12.26□□□□□ -0.45
PCDHGA11-201ENST00000398587 CCL8P80075 99 aa12.26□□□□□ -0.45
PCDHGA11-201ENST00000398587 CFHR1Q03591 330 aa12.26□□□□□ -0.45
PCDHGA11-201ENST00000398587 CTRB2Q6GPI1 263 aa12.26□□□□□ -0.45
PCDHGA11-201ENST00000398587 OVCH2Q7RTZ1 564 aa12.26□□□□□ -0.45
PCDHGA11-201ENST00000398587 TCTEX1D1Q8N7M0 179 aa12.26□□□□□ -0.45
PCDHGA11-201ENST00000398587 OR1L4Q8NGR5 311 aa12.26□□□□□ -0.45
PCDHGA11-201ENST00000398587 FAM131CQ96AQ9 280 aa12.26□□□□□ -0.45
PCDHGA11-201ENST00000398587 TMEM18Q96B42 140 aa12.26□□□□□ -0.45
PCDHGA11-201ENST00000398587 HBZP02008 142 aa12.26□□□□□ -0.45
PCDHGA11-201ENST00000398587 MMP9P14780 707 aa12.26□□□□□ -0.45
PCDHGA11-201ENST00000398587 RNF212Q495C1 297 aa12.26□□□□□ -0.45
PCDHGA11-201ENST00000398587 TPRX1Q8N7U7 411 aa12.26□□□□□ -0.45
PCDHGA11-201ENST00000398587 OR2V2Q96R30 315 aa12.26□□□□□ -0.45
PCDHGA11-201ENST00000398587 SEC11CQ9BY50 192 aa12.26□□□□□ -0.45
PCDHGA11-201ENST00000398587 CCL21O00585 134 aa12.26□□□□□ -0.45
PCDHGA11-201ENST00000398587 GDF9O60383 454 aa12.26□□□□□ -0.45
PCDHGA11-201ENST00000398587 ATP6V0CP27449 155 aa12.26□□□□□ -0.45
PCDHGA11-201ENST00000398587 FAM162BQ5T6X4 162 aa12.26□□□□□ -0.45
PCDHGA11-201ENST00000398587 CLDN14O95500 239 aa12.26□□□□□ -0.45
PCDHGA11-201ENST00000398587 SPP1P10451 314 aa12.26□□□□□ -0.45
PCDHGA11-201ENST00000398587 MPV17P39210 176 aa12.26□□□□□ -0.45
PCDHGA11-201ENST00000398587 FAM24BQ8N5W8 94 aa12.26□□□□□ -0.45
PCDHGA11-201ENST00000398587 HARBI1Q96MB7 349 aa12.26□□□□□ -0.45
PCDHGA11-201ENST00000398587 RNF2Q99496 336 aa12.26□□□□□ -0.45
PCDHGA11-201ENST00000398587 MANBALQ9NQG1 85 aa12.26□□□□□ -0.45
PCDHGA11-201ENST00000398587 OR5AC2Q9NZP5 309 aa12.26□□□□□ -0.45
PCDHGA11-201ENST00000398587 IGLV3-32A0A0A0MS00 114 aa12.25□□□□□ -0.45
PCDHGA11-201ENST00000398587 SUCLG1P53597 346 aaKnown RBP12.25□□□□□ -0.45
PCDHGA11-201ENST00000398587 TNXAQ16473 311 aa12.25□□□□□ -0.45
PCDHGA11-201ENST00000398587 KHDC1LQ5JSQ8 128 aa12.25□□□□□ -0.45
PCDHGA11-201ENST00000398587 ZNF826PQ6ZT77 177 aa12.25□□□□□ -0.45
PCDHGA11-201ENST00000398587 FLYWCH2Q96CP2 140 aaKnown RBP12.25□□□□□ -0.45
PCDHGA11-201ENST00000398587 NMBP08949 121 aa12.25□□□□□ -0.45
PCDHGA11-201ENST00000398587 NRN1LQ496H8 165 aa12.25□□□□□ -0.45
PCDHGA11-201ENST00000398587 TMEM252Q8N6L7 170 aa12.25□□□□□ -0.45
PCDHGA11-201ENST00000398587 FDCSPQ8NFU4 85 aa12.25□□□□□ -0.45
PCDHGA11-201ENST00000398587 KLF14Q8TD94 323 aaPredicted RBP12.25□□□□□ -0.45
PCDHGA11-201ENST00000398587 C5orf66Q9H5L9 145 aa12.25□□□□□ -0.45
PCDHGA11-201ENST00000398587 HEXA-AS1Q9H8Q6 139 aa12.25□□□□□ -0.45
PCDHGA11-201ENST00000398587 CACNA1HO95180 2353 aa12.25□□□□□ -0.45
PCDHGA11-201ENST00000398587 Q56UQ5 140 aa12.25□□□□□ -0.45
PCDHGA11-201ENST00000398587 ABHD14BQ96IU4 210 aa12.25□□□□□ -0.45
PCDHGA11-201ENST00000398587 MRPL13Q9BYD1 178 aaKnown RBP12.25□□□□□ -0.45
PCDHGA11-201ENST00000398587 AAMDCQ9H7C9 122 aa12.25□□□□□ -0.45
PCDHGA11-201ENST00000398587 BARX1Q9HBU1 254 aaPredicted RBP12.25□□□□□ -0.45
PCDHGA11-201ENST00000398587 RAB29O14966 203 aa12.25□□□□□ -0.45
PCDHGA11-201ENST00000398587 SFTPCP11686 197 aa12.25□□□□□ -0.45
PCDHGA11-201ENST00000398587 NPY1RP25929 384 aa12.25□□□□□ -0.45
PCDHGA11-201ENST00000398587 EFNB1P98172 346 aa12.25□□□□□ -0.45
PCDHGA11-201ENST00000398587 ZFP36L1Q07352 338 aaKnown RBP12.25□□□□□ -0.45
PCDHGA11-201ENST00000398587 C19orf57Q0VDD7 668 aa12.25□□□□□ -0.45
PCDHGA11-201ENST00000398587 OR4F17Q8NGA8 305 aa12.25□□□□□ -0.45
PCDHGA11-201ENST00000398587 ITLN1Q8WWA0 313 aa12.25□□□□□ -0.45
PCDHGA11-201ENST00000398587 SNX22Q96L94 193 aa12.25□□□□□ -0.45
PCDHGA11-201ENST00000398587 TMEM167BQ9NRX6 74 aa12.25□□□□□ -0.45
PCDHGA11-201ENST00000398587 SLC25A10Q9UBX3 287 aaPredicted RBP12.25□□□□□ -0.45
PCDHGA11-201ENST00000398587 CLN8Q9UBY8 286 aa12.25□□□□□ -0.45
PCDHGA11-201ENST00000398587 DEDDO75618 318 aa12.24□□□□□ -0.45
PCDHGA11-201ENST00000398587 H2BFSP57053 126 aa12.24□□□□□ -0.45
PCDHGA11-201ENST00000398587 ZNF66Q6ZN08 573 aa12.24□□□□□ -0.45
PCDHGA11-201ENST00000398587 RTN4RQ9BZR6 473 aa12.24□□□□□ -0.45
PCDHGA11-201ENST00000398587 ZNF586Q9NXT0 402 aa12.24□□□□□ -0.45
PCDHGA11-201ENST00000398587 GAR1Q9NY12 217 aaKnown RBP12.24□□□□□ -0.45
PCDHGA11-201ENST00000398587 MRPS18CQ9Y3D5 142 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms